RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Dhx30Q99PU8 1217 aaKnown RBP11.87□□□□□ -0.51
Usp28-203ENSMUST00000213874 Gpatch8A2A6A1 1505 aa11.86□□□□□ -0.51
Usp28-203ENSMUST00000213874 Rprd2Q6NXI6 1469 aaKnown RBP11.86□□□□□ -0.51
Usp28-203ENSMUST00000213874 Adgrb2Q8CGM1 1561 aa11.86□□□□□ -0.51
Usp28-203ENSMUST00000213874 Znf326O88291 580 aa11.85□□□□□ -0.51
Usp28-203ENSMUST00000213874 Lamc3Q9R0B6 1581 aa11.85□□□□□ -0.51
Usp28-203ENSMUST00000213874 Dennd4bQ3U1Y4 1499 aa11.85□□□□□ -0.51
Usp28-203ENSMUST00000213874 Birc3O08863 600 aa11.84□□□□□ -0.51
Usp28-203ENSMUST00000213874 Mre11Q61216 706 aa11.84□□□□□ -0.51
Usp28-203ENSMUST00000213874 Ppp1r3fQ9JIG4 799 aa11.84□□□□□ -0.51
Usp28-203ENSMUST00000213874 Arhgap31A6X8Z5 1425 aa11.84□□□□□ -0.51
Usp28-203ENSMUST00000213874 Rrp12Q6P5B0 1295 aaKnown RBP11.84□□□□□ -0.51
Usp28-203ENSMUST00000213874 Cdk13Q69ZA1 1511 aaKnown RBP11.83□□□□□ -0.52
Usp28-203ENSMUST00000213874 Nkx1-2P42580 305 aa11.83□□□□□ -0.52
Usp28-203ENSMUST00000213874 Fbxo2Q80UW2 297 aa11.83□□□□□ -0.52
Usp28-203ENSMUST00000213874 Cc2d1aQ8K1A6 943 aa11.83□□□□□ -0.52
Usp28-203ENSMUST00000213874 AcrbpQ3V140 540 aa11.83□□□□□ -0.52
Usp28-203ENSMUST00000213874 Arhgef40Q3UPH7 1517 aa11.82□□□□□ -0.52
Usp28-203ENSMUST00000213874 Tsen2Q6P7W5 460 aa11.82□□□□□ -0.52
Usp28-203ENSMUST00000213874 Pde4cQ3UEI1 686 aa11.81□□□□□ -0.52
Usp28-203ENSMUST00000213874 Ccdc146E9Q9F7 977 aa11.81□□□□□ -0.52
Usp28-203ENSMUST00000213874 PogkQ80TC5 607 aa11.81□□□□□ -0.52
Usp28-203ENSMUST00000213874 Ccdc60Q8C4J0 545 aa11.81□□□□□ -0.52
Usp28-203ENSMUST00000213874 Phf14Q9D4H9 881 aa11.81□□□□□ -0.52
Usp28-203ENSMUST00000213874 Trim44Q9QXA7 346 aa11.81□□□□□ -0.52
Usp28-203ENSMUST00000213874 Htatsf1Q8BGC0 757 aa11.8□□□□□ -0.52
Usp28-203ENSMUST00000213874 Erich6bQ9D4S6 220 aa11.8□□□□□ -0.52
Usp28-203ENSMUST00000213874 Spag9Q58A65 1321 aaKnown RBP11.8□□□□□ -0.52
Usp28-203ENSMUST00000213874 Plb1Q3TTY0 1478 aa11.79□□□□□ -0.52
Usp28-203ENSMUST00000213874 Cers3Q1A3B0 383 aa11.79□□□□□ -0.52
Usp28-203ENSMUST00000213874 4933402E13RikQ9D4D2 429 aa11.79□□□□□ -0.52
Usp28-203ENSMUST00000213874 Kank1E9Q238 1360 aa11.79□□□□□ -0.52
Usp28-203ENSMUST00000213874 Myom3A2ABU4 1439 aa11.79□□□□□ -0.52
Usp28-203ENSMUST00000213874 Mug2P28666 1451 aa11.79□□□□□ -0.52
Usp28-203ENSMUST00000213874 Pdia4P08003 638 aaKnown RBP11.79□□□□□ -0.52
Usp28-203ENSMUST00000213874 TnnQ80Z71 1560 aa11.79□□□□□ -0.52
Usp28-203ENSMUST00000213874 Mapk8ip3Q9ESN9 1337 aa11.78□□□□□ -0.52
Usp28-203ENSMUST00000213874 Tex2Q6ZPJ0 1128 aaKnown RBP11.78□□□□□ -0.52
Usp28-203ENSMUST00000213874 PtmaP26350 111 aa11.77□□□□□ -0.52
Usp28-203ENSMUST00000213874 Cd109Q8R422 1442 aa11.77□□□□□ -0.52
Usp28-203ENSMUST00000213874 Mink1Q9JM52 1308 aa11.77□□□□□ -0.52
Usp28-203ENSMUST00000213874 PxdnQ3UQ28 1475 aa11.77□□□□□ -0.53
Usp28-203ENSMUST00000213874 Samd1D3YXK1 519 aa11.76□□□□□ -0.53
Usp28-203ENSMUST00000213874 Rlbp1Q9Z275 317 aa11.76□□□□□ -0.53
Usp28-203ENSMUST00000213874 Jph4Q80WT0 628 aa11.76□□□□□ -0.53
Usp28-203ENSMUST00000213874 SynmQ70IV5 1561 aa11.76□□□□□ -0.53
Usp28-203ENSMUST00000213874 Tmem132aQ922P8 1018 aa11.75□□□□□ -0.53
Usp28-203ENSMUST00000213874 GsdmaQ9EST1 446 aa11.75□□□□□ -0.53
Usp28-203ENSMUST00000213874 Podxl2Q8CAE9 603 aa11.75□□□□□ -0.53
Usp28-203ENSMUST00000213874 Nol12Q8BG17 217 aa11.75□□□□□ -0.53
Usp28-203ENSMUST00000213874 Smc5Q8CG46 1101 aaKnown RBP11.75□□□□□ -0.53
Usp28-203ENSMUST00000213874 Mbd3Q9Z2D8 285 aaKnown RBP11.75□□□□□ -0.53
Usp28-203ENSMUST00000213874 Tnnt1O88346 262 aa11.75□□□□□ -0.53
Usp28-203ENSMUST00000213874 Cog6Q8R3I3 657 aa11.74□□□□□ -0.53
Usp28-203ENSMUST00000213874 IqubQ8CDK3 788 aa11.73□□□□□ -0.53
Usp28-203ENSMUST00000213874 Dmrtc1Q9D9R7 182 aa11.73□□□□□ -0.53
Usp28-203ENSMUST00000213874 Duxf3A0A0N4SV92 674 aa11.73□□□□□ -0.53
Usp28-203ENSMUST00000213874 Tfip11Q9ERA6 838 aaKnown RBP11.73□□□□□ -0.53
Usp28-203ENSMUST00000213874 Wdr7Q920I9 1489 aa11.72□□□□□ -0.53
Usp28-203ENSMUST00000213874 Kif20aP97329 887 aa11.72□□□□□ -0.53
Usp28-203ENSMUST00000213874 Plekhh1Q80TI1 1356 aa11.72□□□□□ -0.53
Usp28-203ENSMUST00000213874 Nom1Q3UFM5 854 aaKnown RBP11.72□□□□□ -0.53
Usp28-203ENSMUST00000213874 Crocc2F6XLV1 1638 aa11.72□□□□□ -0.53
Usp28-203ENSMUST00000213874 Zhx1P70121 873 aa11.71□□□□□ -0.53
Usp28-203ENSMUST00000213874 Trim58Q5NCC9 485 aa11.71□□□□□ -0.53
Usp28-203ENSMUST00000213874 Lmo7E9PYF4 1699 aaKnown RBP11.71□□□□□ -0.53
Usp28-203ENSMUST00000213874 Pik3c2gO70167 1506 aa11.71□□□□□ -0.53
Usp28-203ENSMUST00000213874 Ssh1Q76I79 1042 aa11.71□□□□□ -0.54
Usp28-203ENSMUST00000213874 MpndQ3TV65 487 aa11.7□□□□□ -0.54
Usp28-203ENSMUST00000213874 Rab3gap2Q8BMG7 1366 aa11.69□□□□□ -0.54
Usp28-203ENSMUST00000213874 Tpm2P58774 284 aa11.69□□□□□ -0.54
Usp28-203ENSMUST00000213874 Puf60Q3UEB3 564 aaKnown RBP11.69□□□□□ -0.54
Usp28-203ENSMUST00000213874 Erich3F6QRE9 1637 aa11.69□□□□□ -0.54
Usp28-203ENSMUST00000213874 CalcaP70160 136 aa11.69□□□□□ -0.54
Usp28-203ENSMUST00000213874 Grin2aP35436 1464 aa11.68□□□□□ -0.54
Usp28-203ENSMUST00000213874 Rnf214Q8BFU3 668 aaKnown RBP11.68□□□□□ -0.54
Usp28-203ENSMUST00000213874 Kdm6bQ5NCY0 1641 aa11.68□□□□□ -0.54
Usp28-203ENSMUST00000213874 Catsper2A2ARP9 588 aa11.68□□□□□ -0.54
Usp28-203ENSMUST00000213874 Pla2r1Q62028 1487 aa11.68□□□□□ -0.54
Usp28-203ENSMUST00000213874 Ppp2r3aB2RXC8 1150 aa11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 Sox12Q04890 314 aa11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 Nek4Q9Z1J2 792 aa11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 Triml2E9PW10 424 aa11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 Ccar1Q8CH18 1146 aaKnown RBP11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 Gys2Q8VCB3 704 aa11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 Il16O54824 1322 aa11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 AU019823E9PUQ3 292 aa11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 Il4rP16382 810 aa11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 Maco1Q7TQE6 664 aaKnown RBP11.67□□□□□ -0.54
Usp28-203ENSMUST00000213874 Sptbn5F6UCX4 1208 aa11.66□□□□□ -0.54
Usp28-203ENSMUST00000213874 Trappc8E9PWG2 1437 aa11.66□□□□□ -0.54
Usp28-203ENSMUST00000213874 G3bp1P97855 465 aaKnown RBP11.66□□□□□ -0.54
Usp28-203ENSMUST00000213874 Ppp1r9bQ6R891 817 aaKnown RBP11.66□□□□□ -0.54
Usp28-203ENSMUST00000213874 WizO88286 1684 aaKnown RBP11.66□□□□□ -0.54
Usp28-203ENSMUST00000213874 Kdm2bQ6P1G2 1309 aa11.65□□□□□ -0.54
Usp28-203ENSMUST00000213874 Mcm10Q0VBD2 885 aa11.65□□□□□ -0.54
Usp28-203ENSMUST00000213874 Rbm25B2RY56 838 aaKnown RBP11.65□□□□□ -0.55
Usp28-203ENSMUST00000213874 Ralbp1Q62172 648 aa11.65□□□□□ -0.55
Usp28-203ENSMUST00000213874 Shq1Q7TMX5 569 aa11.65□□□□□ -0.55
Usp28-203ENSMUST00000213874 Ylpm1Q9R0I7 1386 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms