RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Mroh3A0A1D5RM54 893 aa27.11■■□□□ 1.93
Scn1b-203ENSMUST00000211945 Gemin5Q8BX17 1502 aaKnown RBP27.1■■□□□ 1.93
Scn1b-203ENSMUST00000211945 Adamts13Q769J6 1426 aa27.09■■□□□ 1.93
Scn1b-203ENSMUST00000211945 Scn4aQ9ER60 1841 aa27.07■■□□□ 1.92
Scn1b-203ENSMUST00000211945 Rgl3Q3UYI5 709 aa27.07■■□□□ 1.92
Scn1b-203ENSMUST00000211945 Zc3h13E9Q784 1729 aaKnown RBP27.06■■□□□ 1.92
Scn1b-203ENSMUST00000211945 Dip2aQ8BWT5 1523 aa27.05■■□□□ 1.92
Scn1b-203ENSMUST00000211945 Tulp4Q9JIL5 1547 aa27.05■■□□□ 1.92
Scn1b-203ENSMUST00000211945 Rimbp3Q3V0F0 1606 aa27.05■■□□□ 1.92
Scn1b-203ENSMUST00000211945 PplQ9R269 1755 aa27.04■■□□□ 1.92
Scn1b-203ENSMUST00000211945 AU022751B1B0V2 589 aa27.04■■□□□ 1.92
Scn1b-203ENSMUST00000211945 Rims1Q99NE5 1463 aa27.04■■□□□ 1.92
Scn1b-203ENSMUST00000211945 Plxnc1Q9QZC2 1574 aa27.03■■□□□ 1.92
Scn1b-203ENSMUST00000211945 TonslQ6NZL6 1363 aa27.03■■□□□ 1.92
Scn1b-203ENSMUST00000211945 Fbxo41Q6NS60 873 aa27.01■■□□□ 1.91
Scn1b-203ENSMUST00000211945 Iqgap1Q9JKF1 1657 aaKnown RBP27.01■■□□□ 1.91
Scn1b-203ENSMUST00000211945 Myom1Q62234 1667 aaKnown RBP27■■□□□ 1.91
Scn1b-203ENSMUST00000211945 Lmtk3Q5XJV6 1424 aa27■■□□□ 1.91
Scn1b-203ENSMUST00000211945 Pip4k2bQ80XI4 416 aa27■■□□□ 1.91
Scn1b-203ENSMUST00000211945 Scaf11E9PZM7 1456 aaKnown RBP26.96■■□□□ 1.91
Scn1b-203ENSMUST00000211945 Txndc2Q6P902 515 aa26.96■■□□□ 1.91
Scn1b-203ENSMUST00000211945 Phlpp1Q8CHE4 1687 aa26.95■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Cpsf1Q9EPU4 1441 aaKnown RBP26.95■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Polr3aB2RXC6 1390 aa26.94■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Mbd5B1AYB6 1498 aa26.94■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Eif2ak4Q9QZ05 1648 aa26.93■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Cep152A2AUM9 1736 aaKnown RBP26.92■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Cdk13Q69ZA1 1511 aaKnown RBP26.92■■□□□ 1.9
Scn1b-203ENSMUST00000211945 PalldQ9ET54 1408 aa26.91■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Ifit1bl1D3Z6F0 470 aa26.9■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Setd1aE9PYH6 1716 aa26.9■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Arhgef28P97433 1693 aa26.89■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Ncoa1P70365 1447 aa26.89■■□□□ 1.9
Scn1b-203ENSMUST00000211945 Psme1P97371 249 aa26.89■■□□□ 1.89
Scn1b-203ENSMUST00000211945 Rims2Q9EQZ7 1530 aa26.88■■□□□ 1.89
Scn1b-203ENSMUST00000211945 Myo3aQ8K3H5 1613 aa26.88■■□□□ 1.89
Scn1b-203ENSMUST00000211945 Arid4bA2CG63 1314 aaKnown RBP26.87■■□□□ 1.89
Scn1b-203ENSMUST00000211945 IghaA0A0A6YXW6 389 aa26.85■■□□□ 1.89
Scn1b-203ENSMUST00000211945 Grwd1Q810D6 446 aaKnown RBP26.85■■□□□ 1.89
Scn1b-203ENSMUST00000211945 Slc52a2Q9D8F3 450 aa26.85■■□□□ 1.89
Scn1b-203ENSMUST00000211945 Slit3Q9WVB4 1523 aa26.85■■□□□ 1.89
Scn1b-203ENSMUST00000211945 P3h3Q8CG70 732 aa26.85■■□□□ 1.89
Scn1b-203ENSMUST00000211945 Mug2P28666 1451 aa26.84■■□□□ 1.89
Scn1b-203ENSMUST00000211945 Ltbp4Q8K4G1 1666 aa26.83■■□□□ 1.89
Scn1b-203ENSMUST00000211945 MaddQ80U28 1577 aa26.82■■□□□ 1.88
Scn1b-203ENSMUST00000211945 Cdk5rap2Q8K389 1822 aa26.81■■□□□ 1.88
Scn1b-203ENSMUST00000211945 Neurod1Q60867 357 aa26.79■■□□□ 1.88
Scn1b-203ENSMUST00000211945 Rpgrip1Q9EPQ2 1331 aa26.78■■□□□ 1.88
Scn1b-203ENSMUST00000211945 Med1Q925J9 1575 aa26.77■■□□□ 1.88
Scn1b-203ENSMUST00000211945 Shq1Q7TMX5 569 aa26.76■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Nrxn3Q6P9K9 1571 aa26.76■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Srpk2O54781 681 aaKnown RBP26.75■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Kdm2aP59997 1161 aa26.75■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Gm13695A2AK44 830 aa26.74■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Sipa1l1Q8C0T5 1782 aa26.73■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Q9D9H8 365 aa26.73■■□□□ 1.87
Scn1b-203ENSMUST00000211945 PzpQ61838 1495 aa26.72■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Asxl2Q8BZ32 1370 aa26.72■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Pik3r4Q8VD65 1358 aa26.72■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Gm20521D3Z5F7 333 aa26.71■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Fan1Q69ZT1 1020 aa26.71■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Atp1b4Q99ME6 356 aa26.71■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Arap3Q8R5G7 1538 aa26.7■■□□□ 1.87
Scn1b-203ENSMUST00000211945 Dapk1Q80YE7 1442 aa26.7■■□□□ 1.86
Scn1b-203ENSMUST00000211945 Puf60Q3UEB3 564 aaKnown RBP26.7■■□□□ 1.86
Scn1b-203ENSMUST00000211945 Rapgef3Q8VCC8 918 aa26.68■■□□□ 1.86
Scn1b-203ENSMUST00000211945 RalgapbQ8BQZ4 1484 aa26.67■■□□□ 1.86
Scn1b-203ENSMUST00000211945 Ecm2Q5FW85 670 aa26.65■■□□□ 1.86
Scn1b-203ENSMUST00000211945 Thsd7aQ69ZU6 1645 aa26.65■■□□□ 1.86
Scn1b-203ENSMUST00000211945 Las1lA2BE28 776 aaKnown RBP26.65■■□□□ 1.86
Scn1b-203ENSMUST00000211945 Tubgcp6G5E8P0 1769 aa26.64■■□□□ 1.86
Scn1b-203ENSMUST00000211945 Lrrc7Q80TE7 1490 aa26.64■■□□□ 1.85
Scn1b-203ENSMUST00000211945 Ppargc1bQ8VHJ7 1014 aa26.64■■□□□ 1.85
Scn1b-203ENSMUST00000211945 DnmbpQ6TXD4 1580 aa26.63■■□□□ 1.85
Scn1b-203ENSMUST00000211945 Rundc1Q0VDN7 615 aa26.63■■□□□ 1.85
Scn1b-203ENSMUST00000211945 Os9Q8K2C7 672 aa26.63■■□□□ 1.85
Scn1b-203ENSMUST00000211945 Ift172Q6VH22 1749 aa26.6■■□□□ 1.85
Scn1b-203ENSMUST00000211945 Nphp4P59240 1425 aa26.59■■□□□ 1.85
Scn1b-203ENSMUST00000211945 Stard8Q8K031 1019 aa26.59■■□□□ 1.85
Scn1b-203ENSMUST00000211945 Cps1Q8C196 1500 aa26.58■■□□□ 1.84
Scn1b-203ENSMUST00000211945 Plekhg1F6S200 1446 aa26.57■■□□□ 1.84
Scn1b-203ENSMUST00000211945 Card11Q8CIS0 1159 aa26.57■■□□□ 1.84
Scn1b-203ENSMUST00000211945 Usp40Q8BWR4 1235 aa26.56■■□□□ 1.84
Scn1b-203ENSMUST00000211945 Gli3Q61602 1583 aa26.53■■□□□ 1.84
Scn1b-203ENSMUST00000211945 Utp14aQ640M1 767 aaKnown RBP26.52■■□□□ 1.84
Scn1b-203ENSMUST00000211945 Cep170bQ80U49 1574 aa26.51■■□□□ 1.83
Scn1b-203ENSMUST00000211945 Stk26Q99JT2 416 aa26.5■■□□□ 1.83
Scn1b-203ENSMUST00000211945 IqubQ8CDK3 788 aa26.49■■□□□ 1.83
Scn1b-203ENSMUST00000211945 Gtf2e1Q9D0D5 440 aa26.49■■□□□ 1.83
Scn1b-203ENSMUST00000211945 HnrnpmQ9D0E1 729 aaKnown RBP26.49■■□□□ 1.83
Scn1b-203ENSMUST00000211945 Srcin1Q9QWI6 1250 aa26.48■■□□□ 1.83
Scn1b-203ENSMUST00000211945 Hspa1lP16627 641 aa26.47■■□□□ 1.83
Scn1b-203ENSMUST00000211945 Tns3Q5SSZ5 1440 aa26.46■■□□□ 1.83
Scn1b-203ENSMUST00000211945 Col18a1P39061 1774 aa26.45■■□□□ 1.82
Scn1b-203ENSMUST00000211945 Pola1P33609 1465 aa26.44■■□□□ 1.82
Scn1b-203ENSMUST00000211945 Stag3O70576 1240 aa26.43■■□□□ 1.82
Scn1b-203ENSMUST00000211945 Unc13bQ9Z1N9 1602 aa26.42■■□□□ 1.82
Scn1b-203ENSMUST00000211945 Itsn2Q9Z0R6 1659 aa26.42■■□□□ 1.82
Scn1b-203ENSMUST00000211945 Rock2P70336 1388 aa26.41■■□□□ 1.82
Scn1b-203ENSMUST00000211945 Usp32F8VPZ3 1604 aa26.4■■□□□ 1.82
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms