RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Map7d2A2AG50 781 aa21.21■□□□□ 0.99
Ebf3-204ENSMUST00000169486 AampJ3QN89 436 aa21.21■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Q9D2X8 372 aa21.2■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Tnpo1Q8BFY9 898 aaKnown RBP21.2■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Plekhh1Q80TI1 1356 aa21.19■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Nectin2P32507 530 aa21.18■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Rnf214Q8BFU3 668 aaKnown RBP21.18■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Nutm1Q8BHP2 1126 aa21.18■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Tdrd9Q14BI7 1383 aa21.18■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Tpm3P21107 285 aaKnown RBP21.17■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Mink1Q9JM52 1308 aa21.16■□□□□ 0.98
Ebf3-204ENSMUST00000169486 KinQ8K339 391 aa21.16■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Nek4Q9Z1J2 792 aa21.16■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Shroom4Q1W617 1475 aa21.16■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Vps8Q0P5W1 1427 aa21.15■□□□□ 0.98
Ebf3-204ENSMUST00000169486 PogkQ80TC5 607 aa21.15■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Jph4Q80WT0 628 aa21.15■□□□□ 0.98
Ebf3-204ENSMUST00000169486 Nol12Q8BG17 217 aa21.14■□□□□ 0.97
Ebf3-204ENSMUST00000169486 SetQ9EQU5 289 aaKnown RBP21.14■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Cabp4Q8VHC5 271 aa21.13■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Ppp2r3aB2RXC8 1150 aa21.13■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Tpd52l1O54818 204 aa21.13■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Rsph4aQ8BYM7 716 aa21.13■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Bicd2Q921C5 820 aa21.13■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Ric3Q8BPM6 367 aa21.12■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Stk11ipQ3TAA7 1072 aa21.12■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Taf3Q5HZG4 932 aa21.12■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Shq1Q7TMX5 569 aa21.12■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Usp16Q99LG0 825 aa21.11■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Pabpn1Q8CCS6 302 aaKnown RBP21.11■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Cetn4Q8K4K1 168 aa21.1■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Rbm25B2RY56 838 aaKnown RBP21.1■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Smc3Q9CW03 1217 aaKnown RBP21.1■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Ubap1lG3UW59 384 aa21.1■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Ncapd3Q6ZQK0 1506 aa21.1■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Soga1E1U8D0 1418 aa21.09■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Cc2d2bA0A286YDU8 1405 aa21.09■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Drc7Q6V3W6 876 aa21.09■□□□□ 0.97
Ebf3-204ENSMUST00000169486 BccipQ9CWI3 316 aa21.09■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Ppp2r1aQ76MZ3 589 aa21.08■□□□□ 0.97
Ebf3-204ENSMUST00000169486 Ipo4Q8VI75 1082 aa21.08■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Dixdc1Q80Y83 711 aa21.08■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Tceal9Q9DD24 104 aa21.07■□□□□ 0.96
Ebf3-204ENSMUST00000169486 SkilQ60665 675 aa21.07■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Naip1Q9QWK5 1403 aa21.07■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Top2aQ01320 1528 aaKnown RBP21.06■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Rrp9Q91WM3 475 aaKnown RBP21.06■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Dnai2A2AC93 623 aa21.05■□□□□ 0.96
Ebf3-204ENSMUST00000169486 AppP12023 770 aa21.05■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Gnai1B2RSH2 354 aa21.05■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Gnai3Q9DC51 354 aa21.05■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Ccdc173A0JLY1 547 aa21.04■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Cc2d2aQ8CFW7 1633 aa21.04■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Mad1l1Q9WTX8 717 aaKnown RBP21.04■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Ncoa2Q61026 1462 aa21.04■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Hmox1P14901 289 aa21.04■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Ciz1Q8VEH2 845 aa21.03■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Swt1Q9DBQ9 907 aa21.03■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Duox2A2AQ99 1517 aa21.02■□□□□ 0.96
Ebf3-204ENSMUST00000169486 NrkQ9R0G8 1455 aa21.02■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Rbm10Q99KG3 930 aaKnown RBP21.02■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Ap3b2Q9JME5 1082 aa21.02■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Rad54l2Q99NG0 1466 aa21.02■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Urb2E9Q7L1 1524 aaKnown RBP21.02■□□□□ 0.96
Ebf3-204ENSMUST00000169486 Apaf1O88879 1249 aa21.01■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Tpm2P58774 284 aa21.01■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Gprasp1Q5U4C1 1347 aa21.01■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Gabpb2P81069 414 aa21■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Polr1aO35134 1717 aaKnown RBP21■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Phf14Q9D4H9 881 aa21■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Frmpd1A2AKB4 1549 aa20.99■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Ift140E9PY46 1464 aa20.99■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Q8BT18 775 aa20.99■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Usp48Q3V0C5 1052 aa20.98■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Rnf20Q5DTM8 973 aa20.98■□□□□ 0.95
Ebf3-204ENSMUST00000169486 1700010I14RikQ7TPG0 532 aa20.98■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Ccdc47Q9D024 483 aaKnown RBP20.98■□□□□ 0.95
Ebf3-204ENSMUST00000169486 ErbinQ80TH2 1402 aa20.98■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Rab3gap2Q8BMG7 1366 aa20.98■□□□□ 0.95
Ebf3-204ENSMUST00000169486 FosbP13346 338 aa20.98■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Tpm1P58771 284 aa20.98■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Cplx2P84086 134 aa20.98■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Gm21969J3QJZ1 289 aa20.97■□□□□ 0.95
Ebf3-204ENSMUST00000169486 EzrP26040 586 aaKnown RBP20.97■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Hmgn5Q9JL35 406 aa20.97■□□□□ 0.95
Ebf3-204ENSMUST00000169486 L3mbtl2P59178 703 aa20.97■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Cyp46a1Q9WVK8 500 aa20.97■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Ssh1Q76I79 1042 aa20.97■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Srek1Q8BZX4 494 aaKnown RBP20.97■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Pnmal2G3X9N3 661 aa20.97■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Ddx11Q6AXC6 880 aa20.97■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Arid4aF8VPQ2 1261 aaKnown RBP20.96■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Fam13bQ8K2H3 851 aa20.96■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Kif3aP28741 701 aa20.96■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Puf60Q3UEB3 564 aaKnown RBP20.96■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Cux1P53564 1515 aa20.96■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Arap1Q4LDD4 1452 aa20.96■□□□□ 0.95
Ebf3-204ENSMUST00000169486 Plekhg5Q66T02 1073 aa20.95■□□□□ 0.94
Ebf3-204ENSMUST00000169486 Gtf2a1Q99PM3 378 aa20.95■□□□□ 0.94
Ebf3-204ENSMUST00000169486 Cplx1P63040 134 aa20.95■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms