RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 OvosQ3UU35 1456 aa21.13■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Chmp5Q9D7S9 219 aa21.12■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Abca9Q8K449 1623 aa21.11■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Kdm2aP59997 1161 aa21.11■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Armcx1Q9CX83 456 aa21.11■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Hsp90ab1P11499 724 aaKnown RBP21.1■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Rprd2Q6NXI6 1469 aaKnown RBP21.1■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Nkx1-2P42580 305 aa21.09■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Setbp1Q9Z180 1582 aa21.09■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Os9Q8K2C7 672 aa21.09■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Prkrip1Q9CWV6 186 aaKnown RBP21.09■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Gm6268A2A3U9 297 aa21.09■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Ifit1bl1D3Z6F0 470 aa21.08■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Dnajc5gQ8C632 165 aa21.08■□□□□ 0.97
Prpf40b-212ENSMUST00000145482 Asxl1P59598 1514 aa21.07■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Atp7aQ64430 1491 aa21.07■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Plekhg5Q66T02 1073 aa21.07■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Arid4bA2CG63 1314 aaKnown RBP21.06■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 NgefQ8CHT1 710 aa21.06■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 NudcO35685 332 aaKnown RBP21.04■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Inpp5dQ9ES52 1191 aa21.04■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Fhod3Q76LL6 1578 aa21.03■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Rangap1P46061 589 aaKnown RBP21.03■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Pdcd11Q6NS46 1862 aaKnown RBP21.03■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Yeats2Q3TUF7 1407 aa21.03■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Pik3c2gO70167 1506 aa21.03■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Mre11Q61216 706 aa21.03■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Polr3glQ8R0C0 218 aa21.03■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Trpm2Q91YD4 1506 aa21.02■□□□□ 0.96
Prpf40b-212ENSMUST00000145482 Ppm1gQ61074 542 aa21.01■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Afap1Q80YS6 731 aa21.01■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 DmtnQ9WV69 405 aa21.01■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Myom3A2ABU4 1439 aa21.01■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Kank1E9Q238 1360 aa21.01■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Pank3Q8R2W9 370 aa21.01■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 PtprgQ05909 1442 aa21■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Usp54Q8BL06 1588 aaKnown RBP21■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Ttc21bQ0HA38 1315 aa20.99■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Vsig10D3YX43 558 aa20.99■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 EspnQ9ET47 871 aa20.98■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Gtf2a1Q99PM3 378 aa20.98■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Mast1Q9R1L5 1570 aa20.98■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Nos1Q9Z0J4 1429 aa20.97■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Trim26Q99PN3 545 aa20.96■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Kif14L0N7N1 1674 aaKnown RBP20.96■□□□□ 0.95
Prpf40b-212ENSMUST00000145482 Chrna2Q91X60 512 aa20.94■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Rwdd1Q9CQK7 243 aa20.93■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Atp1b4Q99ME6 356 aa20.93■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Ak7Q9D2H2 614 aa20.93■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Pcdh10E9PXQ7 1057 aa20.92■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Dcaf11Q91VU6 549 aa20.92■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Nsd2Q8BVE8 1365 aa20.92■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Paxip1Q6NZQ4 1056 aa20.92■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Speer4f1Q9D5Q6 258 aa20.91■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Lamc1P02468 1607 aaKnown RBP20.91■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Clasp1Q80TV8 1535 aaKnown RBP20.91■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Mug2P28666 1451 aa20.9■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Naip6Q9JIB6 1403 aa20.9■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Znf518aB2RRF6 1478 aaKnown RBP20.9■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Ecm2Q5FW85 670 aa20.9■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Hecw1Q8K4P8 1604 aa20.9■□□□□ 0.94
Prpf40b-212ENSMUST00000145482 Gli2Q0VGT2 1544 aa20.89■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Cdk13Q69ZA1 1511 aaKnown RBP20.89■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Tspyl2Q7TQI8 677 aa20.89■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Xrn1P97789 1719 aaKnown RBP20.89■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Tarbp1E9Q368 1579 aa20.89■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Ythdc1E9Q5K9 736 aaKnown RBP20.88■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Safb2Q80YR5 991 aaKnown RBP20.87■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Nlrp6Q91WS2 869 aa20.87■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Kif16bB1AVY7 1312 aa20.86■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Edc4Q3UJB9 1406 aaKnown RBP20.86■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 ShprhQ7TPQ3 1674 aa20.86■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Gm20521D3Z5F7 333 aa20.85■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Dip2cE9PWR4 1557 aa20.85■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Fan1Q69ZT1 1020 aa20.84■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Rrp9Q91WM3 475 aaKnown RBP20.84■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Kif1bQ60575 1816 aaKnown RBP20.84■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Fndc1E9Q043 1732 aa20.84■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Slc4a1apE9PX68 744 aa20.84■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Cfap65Q3V0B4 1847 aa20.84■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Ylpm1Q9R0I7 1386 aaKnown RBP20.84■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Dot1lQ6XZL8 1540 aa20.83■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 Neurl4Q5NCX5 1563 aa20.83■□□□□ 0.93
Prpf40b-212ENSMUST00000145482 AglF8VPN4 1532 aa20.82■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 ErbinQ80TH2 1402 aa20.82■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Ipo8Q7TMY7 1010 aa20.82■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Dnajc5P60904 198 aa20.81■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Htatsf1Q8BGC0 757 aa20.81■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Pank1Q8K4K6 548 aa20.8■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Ttc37F8VPK0 1563 aa20.8■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Srpk2O54781 681 aaKnown RBP20.79■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Atp10aO54827 1508 aa20.79■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 DekQ7TNV0 380 aaKnown RBP20.78■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Rock1P70335 1354 aa20.78■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Plcb2A3KGF7 1181 aa20.78■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Kdm5cP41230 1554 aa20.77■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 SlkO54988 1233 aa20.77■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Zscan10Q3URR7 782 aa20.77■□□□□ 0.92
Prpf40b-212ENSMUST00000145482 Kif21bQ9QXL1 1668 aa20.76■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Synj2Q9D2G5 1434 aa20.76■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms