RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Zc3h13E9Q784 1729 aaKnown RBP20.66■□□□□ 0.9
Ccdc171-204ENSMUST00000126429 Naip7Q9JIB3 1402 aa20.66■□□□□ 0.9
Ccdc171-204ENSMUST00000126429 Itsn1Q9Z0R4 1714 aa20.66■□□□□ 0.9
Ccdc171-204ENSMUST00000126429 Kif21bQ9QXL1 1668 aa20.64■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 ErbinQ80TH2 1402 aa20.63■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 AatkQ80YE4 1365 aa20.63■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 Kdm5aQ3UXZ9 1690 aa20.62■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 Kif13aQ9EQW7 1749 aa20.62■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 Pik3c2gO70167 1506 aa20.61■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 Arid4bA2CG63 1314 aaKnown RBP20.61■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 Uggt1Q6P5E4 1551 aa20.61■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 Txndc2Q6P902 515 aa20.6■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 Eid3Q3V124 375 aa20.59■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 Prrc2bQ7TPM1 1486 aaKnown RBP20.59■□□□□ 0.89
Ccdc171-204ENSMUST00000126429 Abca8aQ8K442 1620 aa20.57■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Mroh1E0CZ22 1640 aa20.56■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Iqgap1Q9JKF1 1657 aaKnown RBP20.55■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Dot1lQ6XZL8 1540 aa20.55■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 IghaA0A0A6YXW6 389 aa20.55■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Tubgcp6G5E8P0 1769 aa20.54■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Hdac5Q9Z2V6 1113 aa20.54■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Nrxn3Q6P9K9 1571 aa20.54■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Prdm2A2A7B5 1709 aaKnown RBP20.53■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 AU022751B1B0V2 589 aa20.53■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Psme1P97371 249 aa20.53■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 P3h3Q8CG70 732 aa20.53■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Ppip5k1A2ARP1 1436 aa20.53■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Ankrd36D3Z4K0 1415 aa20.53■□□□□ 0.88
Ccdc171-204ENSMUST00000126429 Washc2Q6PGL7 1334 aa20.5■□□□□ 0.87
Ccdc171-204ENSMUST00000126429 Mroh3A0A1D5RM54 893 aa20.48■□□□□ 0.87
Ccdc171-204ENSMUST00000126429 Ehbp1l1Q99MS7 1716 aa20.48■□□□□ 0.87
Ccdc171-204ENSMUST00000126429 Tom1O88746 492 aa20.46■□□□□ 0.87
Ccdc171-204ENSMUST00000126429 Rock1P70335 1354 aa20.46■□□□□ 0.87
Ccdc171-204ENSMUST00000126429 Hspa5P20029 655 aaKnown RBP20.46■□□□□ 0.87
Ccdc171-204ENSMUST00000126429 DnmbpQ6TXD4 1580 aa20.45■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Rprd2Q6NXI6 1469 aaKnown RBP20.45■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Usp47Q8BY87 1376 aa20.45■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Eif2ak4Q9QZ05 1648 aa20.44■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Asxl2Q8BZ32 1370 aa20.44■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Gm13695A2AK44 830 aa20.44■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 PalldQ9ET54 1408 aa20.43■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Lmtk3Q5XJV6 1424 aa20.43■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Nyap1Q6PFX7 833 aa20.42■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Rgl3Q3UYI5 709 aa20.41■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 PplQ9R269 1755 aa20.4■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Myo3aQ8K3H5 1613 aa20.4■□□□□ 0.86
Ccdc171-204ENSMUST00000126429 Amigo3Q8C2S7 508 aa20.39■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Adamts13Q769J6 1426 aa20.38■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Cdk13Q69ZA1 1511 aaKnown RBP20.38■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Med1Q925J9 1575 aa20.37■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Atp1b4Q99ME6 356 aa20.37■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Slit2Q9R1B9 1521 aa20.37■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Q9D9H8 365 aa20.36■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Slit3Q9WVB4 1523 aa20.36■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Shq1Q7TMX5 569 aa20.35■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Tulp4Q9JIL5 1547 aa20.34■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Rims1Q99NE5 1463 aa20.34■□□□□ 0.85
Ccdc171-204ENSMUST00000126429 Arhgef28P97433 1693 aa20.33■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Myom1Q62234 1667 aaKnown RBP20.33■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Ifit1bl1D3Z6F0 470 aa20.32■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Cypt2Q6P924 180 aa20.32■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Plxnc1Q9QZC2 1574 aa20.31■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Gimap5Q8BWF2 308 aa20.31■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Setd1aE9PYH6 1716 aa20.28■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Brinp3Q499E0 766 aa20.28■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Grwd1Q810D6 446 aaKnown RBP20.28■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Kdm2aP59997 1161 aa20.27■□□□□ 0.84
Ccdc171-204ENSMUST00000126429 Mbd5B1AYB6 1498 aa20.26■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 Thsd7aQ69ZU6 1645 aa20.26■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 Slc52a2Q9D8F3 450 aa20.26■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 Slc5a4bQ91ZP4 660 aa20.24■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 Pik3r4Q8VD65 1358 aa20.24■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 Pik3c2aQ61194 1686 aa20.24■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 Fan1Q69ZT1 1020 aa20.23■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 Srpk2O54781 681 aaKnown RBP20.21■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 Zranb1Q7M760 708 aa20.21■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 HnrnpmQ9D0E1 729 aaKnown RBP20.21■□□□□ 0.83
Ccdc171-204ENSMUST00000126429 Puf60Q3UEB3 564 aaKnown RBP20.2■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Neurod1Q60867 357 aa20.2■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Gm20521D3Z5F7 333 aa20.19■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Tns3Q5SSZ5 1440 aa20.19■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 NinlQ6ZQ12 1394 aa20.18■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Arap3Q8R5G7 1538 aa20.18■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Fnbp4Q6ZQ03 1031 aa20.18■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Os9Q8K2C7 672 aa20.18■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Stk26Q99JT2 416 aa20.18■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Polr3aB2RXC6 1390 aa20.17■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 MaddQ80U28 1577 aa20.17■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Col18a1P39061 1774 aa20.17■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Slain2Q8CI08 581 aa20.16■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Qtrt2B8ZXI1 415 aa20.15■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Evi5lH3BKQ3 813 aa20.15■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Sema6bO54951 886 aa20.15■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Rpgrip1Q9EPQ2 1331 aa20.15■□□□□ 0.82
Ccdc171-204ENSMUST00000126429 Ttll13A4Q9F6 804 aa20.14■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Utp14aQ640M1 767 aaKnown RBP20.14■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Cep152A2AUM9 1736 aaKnown RBP20.13■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Cpsf1Q9EPU4 1441 aaKnown RBP20.12■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Adgrl1Q80TR1 1466 aa20.12■□□□□ 0.81
Ccdc171-204ENSMUST00000126429 Tmem94Q7TSH8 1360 aa20.11■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms