RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gm13695A2AK44 830 aa35.52■■■■□ 3.28
Tpm1-216ENSMUST00000113707 Rsph4aQ8BYM7 716 aa35.5■■■■□ 3.27
Tpm1-216ENSMUST00000113707 Stra8P70278 393 aa35.5■■■■□ 3.27
Tpm1-216ENSMUST00000113707 Knl1Q66JQ7 1612 aa35.49■■■■□ 3.27
Tpm1-216ENSMUST00000113707 Myom2Q14BI5 1463 aa35.49■■■■□ 3.27
Tpm1-216ENSMUST00000113707 Kdm2aP59997 1161 aa35.48■■■■□ 3.27
Tpm1-216ENSMUST00000113707 NpatQ8BMA5 1420 aa35.45■■■■□ 3.26
Tpm1-216ENSMUST00000113707 Uggt1Q6P5E4 1551 aa35.44■■■■□ 3.26
Tpm1-216ENSMUST00000113707 Gm20521D3Z5F7 333 aa35.42■■■■□ 3.26
Tpm1-216ENSMUST00000113707 Os9Q8K2C7 672 aa35.4■■■■□ 3.26
Tpm1-216ENSMUST00000113707 Myo3aQ8K3H5 1613 aa35.4■■■■□ 3.26
Tpm1-216ENSMUST00000113707 Srcin1Q9QWI6 1250 aa35.39■■■■□ 3.26
Tpm1-216ENSMUST00000113707 Srpk2O54781 681 aaKnown RBP35.38■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Mroh1E0CZ22 1640 aa35.36■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Pola1P33609 1465 aa35.36■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Stard8Q8K031 1019 aa35.36■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Zbtb4Q5F293 982 aa35.35■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Hfm1D3Z4R1 1434 aa35.35■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Qser1A2BIE1 1698 aa35.35■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Plxnc1Q9QZC2 1574 aa35.34■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Skint5A7XUY5 1461 aa35.34■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Slc24a1Q91WD8 1130 aa35.33■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Tubgcp6G5E8P0 1769 aa35.33■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Cdk5rap2Q8K389 1822 aa35.33■■■■□ 3.25
Tpm1-216ENSMUST00000113707 Afap1Q80YS6 731 aa35.32■■■■□ 3.24
Tpm1-216ENSMUST00000113707 Fan1Q69ZT1 1020 aa35.28■■■■□ 3.24
Tpm1-216ENSMUST00000113707 Ahdc1Q6PAL7 1594 aaKnown RBP35.27■■■■□ 3.24
Tpm1-216ENSMUST00000113707 CltcQ68FD5 1675 aaKnown RBP35.26■■■■□ 3.24
Tpm1-216ENSMUST00000113707 Nphp4P59240 1425 aa35.26■■■■□ 3.24
Tpm1-216ENSMUST00000113707 AU022751B1B0V2 589 aa35.25■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Exoc6Q8R313 802 aa35.24■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Gtf2e1Q9D0D5 440 aa35.24■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Mrs2Q5NCE8 434 aa35.24■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Itsn2Q9Z0R6 1659 aa35.23■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Arhgap23Q69ZH9 1483 aa35.23■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Wwc2Q6NXJ0 1187 aa35.22■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Usp40Q8BWR4 1235 aa35.22■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Sbno1Q689Z5 1390 aa35.22■■■■□ 3.23
Tpm1-216ENSMUST00000113707 DnmbpQ6TXD4 1580 aa35.21■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Sipa1l1Q8C0T5 1782 aa35.21■■■■□ 3.23
Tpm1-216ENSMUST00000113707 Puf60Q3UEB3 564 aaKnown RBP35.2■■■■□ 3.22
Tpm1-216ENSMUST00000113707 RictorQ6QI06 1708 aa35.18■■■■□ 3.22
Tpm1-216ENSMUST00000113707 Arid4bA2CG63 1314 aaKnown RBP35.18■■■■□ 3.22
Tpm1-216ENSMUST00000113707 Slc52a2Q9D8F3 450 aa35.17■■■■□ 3.22
Tpm1-216ENSMUST00000113707 Myom1Q62234 1667 aaKnown RBP35.17■■■■□ 3.22
Tpm1-216ENSMUST00000113707 PrxO55103 1391 aa35.17■■■■□ 3.22
Tpm1-216ENSMUST00000113707 PnisrA2AJT4 805 aaKnown RBP35.16■■■■□ 3.22
Tpm1-216ENSMUST00000113707 Prrc2bQ7TPM1 1486 aaKnown RBP35.14■■■■□ 3.22
Tpm1-216ENSMUST00000113707 Pank3Q8R2W9 370 aa35.13■■■■□ 3.21
Tpm1-216ENSMUST00000113707 NrdcQ8BHG1 1161 aa35.1■■■■□ 3.21
Tpm1-216ENSMUST00000113707 Tmf1B9EKI3 1091 aa35.09■■■■□ 3.21
Tpm1-216ENSMUST00000113707 Slc4a2P13808 1237 aaKnown RBP35.09■■■■□ 3.21
Tpm1-216ENSMUST00000113707 PtprmP28828 1452 aa35.08■■■■□ 3.21
Tpm1-216ENSMUST00000113707 Lrrc7Q80TE7 1490 aa35.07■■■■□ 3.2
Tpm1-216ENSMUST00000113707 Kif13aQ9EQW7 1749 aa35.06■■■■□ 3.2
Tpm1-216ENSMUST00000113707 PalldQ9ET54 1408 aa35.05■■■■□ 3.2
Tpm1-216ENSMUST00000113707 Znf710Q3U288 666 aa35.05■■■■□ 3.2
Tpm1-216ENSMUST00000113707 Itsn1Q9Z0R4 1714 aa35.03■■■■□ 3.2
Tpm1-216ENSMUST00000113707 Adamtsl3G3UXC7 1706 aa35.02■■■■□ 3.2
Tpm1-216ENSMUST00000113707 Inpp5dQ9ES52 1191 aa35.02■■■■□ 3.2
Tpm1-216ENSMUST00000113707 Dnajc5gQ8C632 165 aa35.01■■■■□ 3.2
Tpm1-216ENSMUST00000113707 Slc4a1apE9PX68 744 aa35.01■■■■□ 3.19
Tpm1-216ENSMUST00000113707 Anp32bQ9EST5 272 aaKnown RBP35.01■■■■□ 3.19
Tpm1-216ENSMUST00000113707 Naip7Q9JIB3 1402 aa35■■■■□ 3.19
Tpm1-216ENSMUST00000113707 Ift172Q6VH22 1749 aa35■■■■□ 3.19
Tpm1-216ENSMUST00000113707 Zscan10Q3URR7 782 aa35■■■■□ 3.19
Tpm1-216ENSMUST00000113707 Fam184bQ0KK56 942 aa34.99■■■■□ 3.19
Tpm1-216ENSMUST00000113707 IqubQ8CDK3 788 aa34.98■■■■□ 3.19
Tpm1-216ENSMUST00000113707 Gm16486A0A1D5RMD1 1434 aa34.97■■■■□ 3.19
Tpm1-216ENSMUST00000113707 Tnnt3Q9QZ47 272 aa34.96■■■■□ 3.19
Tpm1-216ENSMUST00000113707 Stag3O70576 1240 aa34.95■■■■□ 3.19
Tpm1-216ENSMUST00000113707 Med14A2ABV5 1459 aaKnown RBP34.94■■■■□ 3.18
Tpm1-216ENSMUST00000113707 Ercc6l2Q9JIM3 1537 aa34.92■■■■□ 3.18
Tpm1-216ENSMUST00000113707 MaddQ80U28 1577 aa34.89■■■■□ 3.18
Tpm1-216ENSMUST00000113707 Arhgef28P97433 1693 aa34.89■■■■□ 3.18
Tpm1-216ENSMUST00000113707 Shq1Q7TMX5 569 aa34.88■■■■□ 3.17
Tpm1-216ENSMUST00000113707 Atp1b4Q99ME6 356 aa34.88■■■■□ 3.17
Tpm1-216ENSMUST00000113707 Kdm5aQ3UXZ9 1690 aa34.87■■■■□ 3.17
Tpm1-216ENSMUST00000113707 Zc3h13E9Q784 1729 aaKnown RBP34.85■■■■□ 3.17
Tpm1-216ENSMUST00000113707 InsrP15208 1372 aa34.83■■■■□ 3.17
Tpm1-216ENSMUST00000113707 CenpjQ569L8 1344 aa34.82■■■■□ 3.17
Tpm1-216ENSMUST00000113707 Rpgrip1lQ8CG73 1264 aa34.81■■■■□ 3.16
Tpm1-216ENSMUST00000113707 Eif2ak4Q9QZ05 1648 aa34.8■■■■□ 3.16
Tpm1-216ENSMUST00000113707 Safb2Q80YR5 991 aaKnown RBP34.78■■■■□ 3.16
Tpm1-216ENSMUST00000113707 Plppr3Q7TPB0 716 aa34.78■■■■□ 3.16
Tpm1-216ENSMUST00000113707 Stk26Q99JT2 416 aa34.76■■■■□ 3.16
Tpm1-216ENSMUST00000113707 PplQ9R269 1755 aa34.75■■■■□ 3.15
Tpm1-216ENSMUST00000113707 Q9D9H8 365 aa34.74■■■■□ 3.15
Tpm1-216ENSMUST00000113707 Tex14Q7M6U3 1450 aa34.73■■■■□ 3.15
Tpm1-216ENSMUST00000113707 P3h3Q8CG70 732 aa34.73■■■■□ 3.15
Tpm1-216ENSMUST00000113707 Chd2E9PZM4 1827 aaKnown RBP34.73■■■■□ 3.15
Tpm1-216ENSMUST00000113707 Zscan21Q07231 555 aa34.71■■■■□ 3.15
Tpm1-216ENSMUST00000113707 Gemin5Q8BX17 1502 aaKnown RBP34.7■■■■□ 3.15
Tpm1-216ENSMUST00000113707 Plekhg1F6S200 1446 aa34.69■■■■□ 3.14
Tpm1-216ENSMUST00000113707 Cep170bQ80U49 1574 aa34.67■■■■□ 3.14
Tpm1-216ENSMUST00000113707 Dnajc5P60904 198 aa34.67■■■■□ 3.14
Tpm1-216ENSMUST00000113707 Dip2aQ8BWT5 1523 aa34.66■■■■□ 3.14
Tpm1-216ENSMUST00000113707 Rab3gap2Q8BMG7 1366 aa34.66■■■■□ 3.14
Tpm1-216ENSMUST00000113707 Gprasp1Q5U4C1 1347 aa34.66■■■■□ 3.14
Tpm1-216ENSMUST00000113707 Ppp2r1aQ76MZ3 589 aa34.66■■■■□ 3.14
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms