RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Iqgap1Q9JKF1 1657 aaKnown RBP23.67■■□□□ 1.38
Tpm1-215ENSMUST00000113705 Eif2ak4Q9QZ05 1648 aa23.67■■□□□ 1.38
Tpm1-215ENSMUST00000113705 Psme1P97371 249 aa23.65■■□□□ 1.38
Tpm1-215ENSMUST00000113705 Eid3Q3V124 375 aa23.65■■□□□ 1.38
Tpm1-215ENSMUST00000113705 Rapgef3Q8VCC8 918 aa23.65■■□□□ 1.38
Tpm1-215ENSMUST00000113705 Myo3aQ8K3H5 1613 aa23.65■■□□□ 1.38
Tpm1-215ENSMUST00000113705 Dot1lQ6XZL8 1540 aa23.64■■□□□ 1.38
Tpm1-215ENSMUST00000113705 Gemin5Q8BX17 1502 aaKnown RBP23.64■■□□□ 1.37
Tpm1-215ENSMUST00000113705 AatkQ80YE4 1365 aa23.63■■□□□ 1.37
Tpm1-215ENSMUST00000113705 Gli3Q61602 1583 aa23.62■■□□□ 1.37
Tpm1-215ENSMUST00000113705 PplQ9R269 1755 aa23.61■■□□□ 1.37
Tpm1-215ENSMUST00000113705 Zc3h13E9Q784 1729 aaKnown RBP23.6■■□□□ 1.37
Tpm1-215ENSMUST00000113705 Nrxn3Q6P9K9 1571 aa23.6■■□□□ 1.37
Tpm1-215ENSMUST00000113705 IghaA0A0A6YXW6 389 aa23.57■■□□□ 1.36
Tpm1-215ENSMUST00000113705 Atp1b4Q99ME6 356 aa23.57■■□□□ 1.36
Tpm1-215ENSMUST00000113705 Asxl2Q8BZ32 1370 aa23.57■■□□□ 1.36
Tpm1-215ENSMUST00000113705 Hdac5Q9Z2V6 1113 aa23.55■■□□□ 1.36
Tpm1-215ENSMUST00000113705 Med1Q925J9 1575 aa23.54■■□□□ 1.36
Tpm1-215ENSMUST00000113705 Tubgcp6G5E8P0 1769 aa23.54■■□□□ 1.36
Tpm1-215ENSMUST00000113705 Mroh3A0A1D5RM54 893 aa23.54■■□□□ 1.36
Tpm1-215ENSMUST00000113705 Setd1aE9PYH6 1716 aa23.53■■□□□ 1.36
Tpm1-215ENSMUST00000113705 Washc2Q6PGL7 1334 aa23.52■■□□□ 1.36
Tpm1-215ENSMUST00000113705 Ppip5k1A2ARP1 1436 aa23.52■■□□□ 1.36
Tpm1-215ENSMUST00000113705 AU022751B1B0V2 589 aa23.51■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Rprd2Q6NXI6 1469 aaKnown RBP23.51■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Ankrd36D3Z4K0 1415 aa23.5■■□□□ 1.35
Tpm1-215ENSMUST00000113705 PalldQ9ET54 1408 aa23.5■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Arhgef28P97433 1693 aa23.5■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Myom1Q62234 1667 aaKnown RBP23.5■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Usp47Q8BY87 1376 aa23.49■■□□□ 1.35
Tpm1-215ENSMUST00000113705 PzpQ61838 1495 aa23.48■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Lmtk3Q5XJV6 1424 aa23.47■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Rgl3Q3UYI5 709 aa23.47■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Slit3Q9WVB4 1523 aa23.46■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Plxnc1Q9QZC2 1574 aa23.46■■□□□ 1.35
Tpm1-215ENSMUST00000113705 Q9D9H8 365 aa23.45■■□□□ 1.34
Tpm1-215ENSMUST00000113705 Thsd7aQ69ZU6 1645 aa23.44■■□□□ 1.34
Tpm1-215ENSMUST00000113705 Fbxo41Q6NS60 873 aa23.44■■□□□ 1.34
Tpm1-215ENSMUST00000113705 Shq1Q7TMX5 569 aa23.44■■□□□ 1.34
Tpm1-215ENSMUST00000113705 Rock1P70335 1354 aa23.43■■□□□ 1.34
Tpm1-215ENSMUST00000113705 Hspa5P20029 655 aaKnown RBP23.42■■□□□ 1.34
Tpm1-215ENSMUST00000113705 Tulp4Q9JIL5 1547 aa23.42■■□□□ 1.34
Tpm1-215ENSMUST00000113705 Ecm2Q5FW85 670 aa23.4■■□□□ 1.34
Tpm1-215ENSMUST00000113705 Hspa1lP16627 641 aa23.37■■□□□ 1.33
Tpm1-215ENSMUST00000113705 Rims1Q99NE5 1463 aa23.36■■□□□ 1.33
Tpm1-215ENSMUST00000113705 Adamts13Q769J6 1426 aa23.36■■□□□ 1.33
Tpm1-215ENSMUST00000113705 Ifit1bl1D3Z6F0 470 aa23.35■■□□□ 1.33
Tpm1-215ENSMUST00000113705 Bcl11bQ99PV8 884 aa23.35■■□□□ 1.33
Tpm1-215ENSMUST00000113705 Kdm2aP59997 1161 aa23.35■■□□□ 1.33
Tpm1-215ENSMUST00000113705 Tns3Q5SSZ5 1440 aa23.32■■□□□ 1.32
Tpm1-215ENSMUST00000113705 Os9Q8K2C7 672 aa23.32■■□□□ 1.32
Tpm1-215ENSMUST00000113705 Grwd1Q810D6 446 aaKnown RBP23.3■■□□□ 1.32
Tpm1-215ENSMUST00000113705 Amigo3Q8C2S7 508 aa23.29■■□□□ 1.32
Tpm1-215ENSMUST00000113705 Neurod1Q60867 357 aa23.28■■□□□ 1.32
Tpm1-215ENSMUST00000113705 HnrnpmQ9D0E1 729 aaKnown RBP23.27■■□□□ 1.32
Tpm1-215ENSMUST00000113705 Stk26Q99JT2 416 aa23.27■■□□□ 1.32
Tpm1-215ENSMUST00000113705 Pik3r4Q8VD65 1358 aa23.27■■□□□ 1.32
Tpm1-215ENSMUST00000113705 Col18a1P39061 1774 aa23.26■■□□□ 1.31
Tpm1-215ENSMUST00000113705 MaddQ80U28 1577 aa23.26■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Srpk2O54781 681 aaKnown RBP23.26■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Fan1Q69ZT1 1020 aa23.26■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Evi5lH3BKQ3 813 aa23.25■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Arap3Q8R5G7 1538 aa23.25■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Cep152A2AUM9 1736 aaKnown RBP23.24■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Mbd5B1AYB6 1498 aa23.23■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Tmem94Q7TSH8 1360 aa23.22■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Slain2Q8CI08 581 aa23.22■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Slc52a2Q9D8F3 450 aa23.22■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Ift172Q6VH22 1749 aa23.21■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Iqsec2Q5DU25 1478 aa23.21■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Cdk13Q69ZA1 1511 aaKnown RBP23.21■■□□□ 1.31
Tpm1-215ENSMUST00000113705 Gm20521D3Z5F7 333 aa23.19■■□□□ 1.3
Tpm1-215ENSMUST00000113705 Utp14aQ640M1 767 aaKnown RBP23.19■■□□□ 1.3
Tpm1-215ENSMUST00000113705 Cps1Q8C196 1500 aa23.19■■□□□ 1.3
Tpm1-215ENSMUST00000113705 Lrrc7Q80TE7 1490 aa23.18■■□□□ 1.3
Tpm1-215ENSMUST00000113705 Cdk5rap2Q8K389 1822 aa23.18■■□□□ 1.3
Tpm1-215ENSMUST00000113705 Puf60Q3UEB3 564 aaKnown RBP23.18■■□□□ 1.3
Tpm1-215ENSMUST00000113705 Brinp3Q499E0 766 aa23.17■■□□□ 1.3
Tpm1-215ENSMUST00000113705 Unc13bQ9Z1N9 1602 aa23.15■■□□□ 1.3
Tpm1-215ENSMUST00000113705 Cep170bQ80U49 1574 aa23.14■■□□□ 1.3
Tpm1-215ENSMUST00000113705 Col14a1Q80X19 1797 aa23.13■■□□□ 1.29
Tpm1-215ENSMUST00000113705 DnmbpQ6TXD4 1580 aa23.11■■□□□ 1.29
Tpm1-215ENSMUST00000113705 NalcnQ8BXR5 1738 aa23.11■■□□□ 1.29
Tpm1-215ENSMUST00000113705 Polr3aB2RXC6 1390 aa23.07■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Itsn2Q9Z0R6 1659 aa23.07■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Nwd1A6H603 1563 aa23.07■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Kif20bQ80WE4 1774 aaKnown RBP23.06■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Rreb1Q3UH06 1700 aaKnown RBP23.06■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Atf3Q60765 181 aa23.06■■□□□ 1.28
Tpm1-215ENSMUST00000113705 C3P01027 1663 aa23.06■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Pik3c2bE9QAN8 1632 aa23.05■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Mug2P28666 1451 aa23.05■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Gimap5Q8BWF2 308 aa23.04■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Sipa1l1Q8C0T5 1782 aa23.04■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Usp32F8VPZ3 1604 aa23.03■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Gm10563F6WIE4 79 aa23.03■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Q3UJC8 639 aa23.03■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Tom1O88746 492 aa23.02■■□□□ 1.28
Tpm1-215ENSMUST00000113705 Stag3O70576 1240 aa23.01■■□□□ 1.27
Tpm1-215ENSMUST00000113705 Usp40Q8BWR4 1235 aa23.01■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms