RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Atp10aO54827 1508 aa9.25□□□□□ -0.93
Chm-202ENSMUST00000113388 VgfQ0VGU4 617 aa9.25□□□□□ -0.93
Chm-202ENSMUST00000113388 Prdm16A2A935 1275 aa9.25□□□□□ -0.93
Chm-202ENSMUST00000113388 Tcerg1Q8CGF7 1100 aaKnown RBP9.25□□□□□ -0.93
Chm-202ENSMUST00000113388 Mrvi1Q9WUX5 899 aaKnown RBP9.25□□□□□ -0.93
Chm-202ENSMUST00000113388 Iqcf3Q9D498 203 aa9.25□□□□□ -0.93
Chm-202ENSMUST00000113388 Gtf3c6Q9D8P7 227 aa9.25□□□□□ -0.93
Chm-202ENSMUST00000113388 Skap1Q3UUV5 355 aa9.24□□□□□ -0.93
Chm-202ENSMUST00000113388 Cdc42bpbQ7TT50 1713 aa9.24□□□□□ -0.93
Chm-202ENSMUST00000113388 Arid3aQ62431 601 aa9.24□□□□□ -0.93
Chm-202ENSMUST00000113388 Pip4k2bQ80XI4 416 aa9.24□□□□□ -0.93
Chm-202ENSMUST00000113388 Pde4cQ3UEI1 686 aa9.23□□□□□ -0.93
Chm-202ENSMUST00000113388 RereQ80TZ9 1558 aa9.23□□□□□ -0.93
Chm-202ENSMUST00000113388 Erich4Q3UNU4 136 aa9.23□□□□□ -0.93
Chm-202ENSMUST00000113388 Gli2Q0VGT2 1544 aa9.22□□□□□ -0.93
Chm-202ENSMUST00000113388 Alpk3Q924C5 1678 aa9.22□□□□□ -0.93
Chm-202ENSMUST00000113388 Trak1Q6PD31 939 aa9.22□□□□□ -0.93
Chm-202ENSMUST00000113388 Nup155Q99P88 1391 aaKnown RBP9.22□□□□□ -0.93
Chm-202ENSMUST00000113388 Znf526Q8BI66 675 aa9.22□□□□□ -0.93
Chm-202ENSMUST00000113388 P3h3Q8CG70 732 aa9.22□□□□□ -0.93
Chm-202ENSMUST00000113388 Ssh2Q5SW75 1423 aa9.22□□□□□ -0.93
Chm-202ENSMUST00000113388 Znf771Q8BJ90 317 aa9.22□□□□□ -0.93
Chm-202ENSMUST00000113388 Camsap2Q8C1B1 1461 aa9.21□□□□□ -0.93
Chm-202ENSMUST00000113388 Il16O54824 1322 aa9.21□□□□□ -0.93
Chm-202ENSMUST00000113388 Stk24Q99KH8 431 aa9.21□□□□□ -0.93
Chm-202ENSMUST00000113388 Naip6Q9JIB6 1403 aa9.21□□□□□ -0.93
Chm-202ENSMUST00000113388 Dennd4bQ3U1Y4 1499 aa9.21□□□□□ -0.94
Chm-202ENSMUST00000113388 AppP12023 770 aa9.21□□□□□ -0.94
Chm-202ENSMUST00000113388 Ppm1gQ61074 542 aa9.21□□□□□ -0.94
Chm-202ENSMUST00000113388 Phf14Q9D4H9 881 aa9.2□□□□□ -0.94
Chm-202ENSMUST00000113388 Kdm5cP41230 1554 aa9.2□□□□□ -0.94
Chm-202ENSMUST00000113388 Paxip1Q6NZQ4 1056 aa9.2□□□□□ -0.94
Chm-202ENSMUST00000113388 SphkapQ6NSW3 1687 aa9.19□□□□□ -0.94
Chm-202ENSMUST00000113388 Sh3bp5Q9Z131 463 aa9.19□□□□□ -0.94
Chm-202ENSMUST00000113388 UacaQ8CGB3 1411 aa9.19□□□□□ -0.94
Chm-202ENSMUST00000113388 Kif14L0N7N1 1674 aaKnown RBP9.19□□□□□ -0.94
Chm-202ENSMUST00000113388 Tex2Q6ZPJ0 1128 aaKnown RBP9.19□□□□□ -0.94
Chm-202ENSMUST00000113388 Nos1Q9Z0J4 1429 aa9.18□□□□□ -0.94
Chm-202ENSMUST00000113388 Gm13695A2AK44 830 aa9.18□□□□□ -0.94
Chm-202ENSMUST00000113388 Clstn2Q9ER65 966 aa9.18□□□□□ -0.94
Chm-202ENSMUST00000113388 Dnai1Q8C0M8 701 aa9.18□□□□□ -0.94
Chm-202ENSMUST00000113388 Atp1b4Q99ME6 356 aa9.18□□□□□ -0.94
Chm-202ENSMUST00000113388 Erich6bQ9D4S6 220 aa9.18□□□□□ -0.94
Chm-202ENSMUST00000113388 Zhx1P70121 873 aa9.17□□□□□ -0.94
Chm-202ENSMUST00000113388 Ttll5Q8CHB8 1328 aa9.17□□□□□ -0.94
Chm-202ENSMUST00000113388 Ncapd3Q6ZQK0 1506 aa9.17□□□□□ -0.94
Chm-202ENSMUST00000113388 Fam13bQ8K2H3 851 aa9.17□□□□□ -0.94
Chm-202ENSMUST00000113388 Kdm3bQ6ZPY7 1562 aa9.17□□□□□ -0.94
Chm-202ENSMUST00000113388 Pdcd11Q6NS46 1862 aaKnown RBP9.17□□□□□ -0.94
Chm-202ENSMUST00000113388 Vsig10D3YX43 558 aa9.16□□□□□ -0.94
Chm-202ENSMUST00000113388 Cul9Q80TT8 1865 aa9.16□□□□□ -0.94
Chm-202ENSMUST00000113388 Znf518aB2RRF6 1478 aaKnown RBP9.16□□□□□ -0.94
Chm-202ENSMUST00000113388 Kcnn1Q9EQR3 537 aa9.16□□□□□ -0.94
Chm-202ENSMUST00000113388 Mia2Q91ZV0 1396 aa9.16□□□□□ -0.94
Chm-202ENSMUST00000113388 Fmn2Q9JL04 1578 aa9.15□□□□□ -0.94
Chm-202ENSMUST00000113388 Cers3Q1A3B0 383 aa9.15□□□□□ -0.95
Chm-202ENSMUST00000113388 Mphosph9A6H5Y1 991 aa9.14□□□□□ -0.95
Chm-202ENSMUST00000113388 Hsp90ab1P11499 724 aaKnown RBP9.14□□□□□ -0.95
Chm-202ENSMUST00000113388 Kif20aP97329 887 aa9.14□□□□□ -0.95
Chm-202ENSMUST00000113388 Kiaa0556Q8C753 1610 aa9.14□□□□□ -0.95
Chm-202ENSMUST00000113388 Neurl4Q5NCX5 1563 aa9.14□□□□□ -0.95
Chm-202ENSMUST00000113388 Usp54Q8BL06 1588 aaKnown RBP9.14□□□□□ -0.95
Chm-202ENSMUST00000113388 Pdia4P08003 638 aaKnown RBP9.13□□□□□ -0.95
Chm-202ENSMUST00000113388 Xrn1P97789 1719 aaKnown RBP9.13□□□□□ -0.95
Chm-202ENSMUST00000113388 PtprmP28828 1452 aa9.13□□□□□ -0.95
Chm-202ENSMUST00000113388 Naip5Q9R016 1403 aa9.13□□□□□ -0.95
Chm-202ENSMUST00000113388 Plcb2A3KGF7 1181 aa9.13□□□□□ -0.95
Chm-202ENSMUST00000113388 Txndc2Q6P902 515 aa9.13□□□□□ -0.95
Chm-202ENSMUST00000113388 PtmaP26350 111 aa9.12□□□□□ -0.95
Chm-202ENSMUST00000113388 Gpatch11Q3UFS4 262 aa9.12□□□□□ -0.95
Chm-202ENSMUST00000113388 Mre11Q61216 706 aa9.12□□□□□ -0.95
Chm-202ENSMUST00000113388 Hecw1Q8K4P8 1604 aa9.12□□□□□ -0.95
Chm-202ENSMUST00000113388 ErmnQ5EBJ4 281 aa9.12□□□□□ -0.95
Chm-202ENSMUST00000113388 Ush1cQ9ES64 910 aa9.12□□□□□ -0.95
Chm-202ENSMUST00000113388 Adgrl2Q8JZZ7 1487 aa9.12□□□□□ -0.95
Chm-202ENSMUST00000113388 Sall3Q62255 1320 aa9.12□□□□□ -0.95
Chm-202ENSMUST00000113388 Nom1Q3UFM5 854 aaKnown RBP9.12□□□□□ -0.95
Chm-202ENSMUST00000113388 Ttc21bQ0HA38 1315 aa9.11□□□□□ -0.95
Chm-202ENSMUST00000113388 Sart3Q9JLI8 962 aaKnown RBP9.11□□□□□ -0.95
Chm-202ENSMUST00000113388 Adamtsl3G3UXC7 1706 aa9.11□□□□□ -0.95
Chm-202ENSMUST00000113388 Pkd2O35245 966 aa9.11□□□□□ -0.95
Chm-202ENSMUST00000113388 Cd109Q8R422 1442 aa9.11□□□□□ -0.95
Chm-202ENSMUST00000113388 Cdc42bpgQ80UW5 1551 aa9.11□□□□□ -0.95
Chm-202ENSMUST00000113388 Becn1O88597 448 aa9.1□□□□□ -0.95
Chm-202ENSMUST00000113388 Os9Q8K2C7 672 aa9.1□□□□□ -0.95
Chm-202ENSMUST00000113388 SlkO54988 1233 aa9.1□□□□□ -0.95
Chm-202ENSMUST00000113388 Ssr1Q9CY50 286 aaKnown RBP9.1□□□□□ -0.95
Chm-202ENSMUST00000113388 Znf710Q3U288 666 aa9.1□□□□□ -0.95
Chm-202ENSMUST00000113388 Dhx9O70133 1380 aaKnown RBP9.1□□□□□ -0.95
Chm-202ENSMUST00000113388 4930407I10RikD3Z5T8 1512 aa9.09□□□□□ -0.95
Chm-202ENSMUST00000113388 Fhad1A6PWD2 1420 aa9.09□□□□□ -0.95
Chm-202ENSMUST00000113388 CltcQ68FD5 1675 aaKnown RBP9.09□□□□□ -0.95
Chm-202ENSMUST00000113388 Rgl3Q3UYI5 709 aa9.09□□□□□ -0.95
Chm-202ENSMUST00000113388 Dhx30Q99PU8 1217 aaKnown RBP9.09□□□□□ -0.95
Chm-202ENSMUST00000113388 AlkP97793 1621 aa9.09□□□□□ -0.95
Chm-202ENSMUST00000113388 Ecm2Q5FW85 670 aa9.09□□□□□ -0.95
Chm-202ENSMUST00000113388 Vps8Q0P5W1 1427 aa9.09□□□□□ -0.96
Chm-202ENSMUST00000113388 Zmym4A2A791 1549 aaKnown RBP9.09□□□□□ -0.96
Chm-202ENSMUST00000113388 Fhod3Q76LL6 1578 aa9.09□□□□□ -0.96
Chm-202ENSMUST00000113388 Mast1Q9R1L5 1570 aa9.09□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms