RNA–Protein interactions for RNA: ENSMUST00000110808.1

Ino80-202, Transcript of DNA helicase INO80, mousemouse

TSL 1 (best) BASIC

Gene Ino80, Length 3,928 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80-202ENSMUST00000110808 Atp7aQ64430 1491 aa18.28■□□□□ 0.52
Ino80-202ENSMUST00000110808 NudcO35685 332 aaKnown RBP18.27■□□□□ 0.52
Ino80-202ENSMUST00000110808 Asxl1P59598 1514 aa18.27■□□□□ 0.51
Ino80-202ENSMUST00000110808 Kdm3bQ6ZPY7 1562 aa18.27■□□□□ 0.51
Ino80-202ENSMUST00000110808 Rab3gap2Q8BMG7 1366 aa18.26■□□□□ 0.51
Ino80-202ENSMUST00000110808 Apaf1O88879 1249 aa18.26■□□□□ 0.51
Ino80-202ENSMUST00000110808 Dnai1Q8C0M8 701 aa18.26■□□□□ 0.51
Ino80-202ENSMUST00000110808 Pank1Q8K4K6 548 aa18.26■□□□□ 0.51
Ino80-202ENSMUST00000110808 Ttc21bQ0HA38 1315 aa18.25■□□□□ 0.51
Ino80-202ENSMUST00000110808 Ssh2Q5SW75 1423 aa18.25■□□□□ 0.51
Ino80-202ENSMUST00000110808 Mug2P28666 1451 aa18.24■□□□□ 0.51
Ino80-202ENSMUST00000110808 Pibf1E9Q6K3 756 aa18.24■□□□□ 0.51
Ino80-202ENSMUST00000110808 Irx3P81067 507 aa18.24■□□□□ 0.51
Ino80-202ENSMUST00000110808 Spryd3E9Q9B3 442 aa18.24■□□□□ 0.51
Ino80-202ENSMUST00000110808 Ralbp1Q62172 648 aa18.24■□□□□ 0.51
Ino80-202ENSMUST00000110808 Prkrip1Q9CWV6 186 aaKnown RBP18.23■□□□□ 0.51
Ino80-202ENSMUST00000110808 Adamts12Q811B3 1600 aa18.22■□□□□ 0.51
Ino80-202ENSMUST00000110808 Ccar1Q8CH18 1146 aaKnown RBP18.22■□□□□ 0.51
Ino80-202ENSMUST00000110808 Ttll13A4Q9F6 804 aa18.22■□□□□ 0.51
Ino80-202ENSMUST00000110808 DekQ7TNV0 380 aaKnown RBP18.21■□□□□ 0.51
Ino80-202ENSMUST00000110808 Atp2b2Q9R0K7 1198 aa18.2■□□□□ 0.5
Ino80-202ENSMUST00000110808 Ccdc60Q8C4J0 545 aa18.2■□□□□ 0.5
Ino80-202ENSMUST00000110808 Igf1rQ60751 1373 aa18.18■□□□□ 0.5
Ino80-202ENSMUST00000110808 Afap1Q80YS6 731 aa18.18■□□□□ 0.5
Ino80-202ENSMUST00000110808 Cdk13Q69ZA1 1511 aaKnown RBP18.18■□□□□ 0.5
Ino80-202ENSMUST00000110808 Iqcf3Q9D498 203 aa18.18■□□□□ 0.5
Ino80-202ENSMUST00000110808 Ipo8Q7TMY7 1010 aa18.17■□□□□ 0.5
Ino80-202ENSMUST00000110808 Dennd4bQ3U1Y4 1499 aa18.16■□□□□ 0.5
Ino80-202ENSMUST00000110808 AI481877A2ALV5 1481 aa18.15■□□□□ 0.5
Ino80-202ENSMUST00000110808 Arhgef12Q8R4H2 1543 aaKnown RBP18.15■□□□□ 0.5
Ino80-202ENSMUST00000110808 AlkP97793 1621 aa18.15■□□□□ 0.5
Ino80-202ENSMUST00000110808 Mfap1aC0HKD8 439 aaKnown RBP18.14■□□□□ 0.49
Ino80-202ENSMUST00000110808 Mfap1bC0HKD9 439 aaKnown RBP18.14■□□□□ 0.49
Ino80-202ENSMUST00000110808 Gsto1O09131 240 aa18.14■□□□□ 0.49
Ino80-202ENSMUST00000110808 Ythdc2B2RR83 1445 aaKnown RBP18.14■□□□□ 0.49
Ino80-202ENSMUST00000110808 Plekhh1Q80TI1 1356 aa18.14■□□□□ 0.49
Ino80-202ENSMUST00000110808 Kdm6bQ5NCY0 1641 aa18.14■□□□□ 0.49
Ino80-202ENSMUST00000110808 Map7O88735 730 aa18.13■□□□□ 0.49
Ino80-202ENSMUST00000110808 Gcc2Q8CHG3 1679 aa18.13■□□□□ 0.49
Ino80-202ENSMUST00000110808 Arhgef11Q68FM7 1552 aa18.12■□□□□ 0.49
Ino80-202ENSMUST00000110808 Trim58Q5NCC9 485 aa18.12■□□□□ 0.49
Ino80-202ENSMUST00000110808 RalgapbQ8BQZ4 1484 aa18.12■□□□□ 0.49
Ino80-202ENSMUST00000110808 Nectin2P32507 530 aa18.11■□□□□ 0.49
Ino80-202ENSMUST00000110808 Zranb1Q7M760 708 aa18.11■□□□□ 0.49
Ino80-202ENSMUST00000110808 Plcb2A3KGF7 1181 aa18.11■□□□□ 0.49
Ino80-202ENSMUST00000110808 Nutm1Q8BHP2 1126 aa18.11■□□□□ 0.49
Ino80-202ENSMUST00000110808 DroshaQ5HZJ0 1373 aaKnown RBP18.11■□□□□ 0.49
Ino80-202ENSMUST00000110808 Mapkbp1Q6NS57 1503 aa18.11■□□□□ 0.49
Ino80-202ENSMUST00000110808 Naip6Q9JIB6 1403 aa18.1■□□□□ 0.49
Ino80-202ENSMUST00000110808 Eif2s2Q99L45 331 aaKnown RBP18.1■□□□□ 0.49
Ino80-202ENSMUST00000110808 Tnnt1O88346 262 aa18.1■□□□□ 0.49
Ino80-202ENSMUST00000110808 Sart3Q9JLI8 962 aaKnown RBP18.1■□□□□ 0.49
Ino80-202ENSMUST00000110808 Atxn3Q9CVD2 355 aa18.09■□□□□ 0.49
Ino80-202ENSMUST00000110808 Ak7Q9D2H2 614 aa18.09■□□□□ 0.49
Ino80-202ENSMUST00000110808 Rtf1A2AQ19 715 aaKnown RBP18.08■□□□□ 0.48
Ino80-202ENSMUST00000110808 G3bp1P97855 465 aaKnown RBP18.08■□□□□ 0.48
Ino80-202ENSMUST00000110808 Htatsf1Q8BGC0 757 aa18.08■□□□□ 0.48
Ino80-202ENSMUST00000110808 GorabQ8BRM2 368 aa18.08■□□□□ 0.48
Ino80-202ENSMUST00000110808 Tspyl2Q7TQI8 677 aa18.07■□□□□ 0.48
Ino80-202ENSMUST00000110808 Gtf3c3Q3TMP1 882 aa18.06■□□□□ 0.48
Ino80-202ENSMUST00000110808 KarsQ99MN1 595 aaKnown RBP18.06■□□□□ 0.48
Ino80-202ENSMUST00000110808 Ylpm1Q9R0I7 1386 aaKnown RBP18.06■□□□□ 0.48
Ino80-202ENSMUST00000110808 KnstrnQ9D9Z1 312 aaKnown RBP18.05■□□□□ 0.48
Ino80-202ENSMUST00000110808 Cald1E9QA15 768 aaKnown RBP18.05■□□□□ 0.48
Ino80-202ENSMUST00000110808 Abca16E9PWJ7 1678 aa18.05■□□□□ 0.48
Ino80-202ENSMUST00000110808 Dusp27Q148W8 1138 aa18.04■□□□□ 0.48
Ino80-202ENSMUST00000110808 Liat1Q810M6 228 aa18.04■□□□□ 0.48
Ino80-202ENSMUST00000110808 Cabp4Q8VHC5 271 aa18.04■□□□□ 0.48
Ino80-202ENSMUST00000110808 Cpsf1Q9EPU4 1441 aaKnown RBP18.03■□□□□ 0.48
Ino80-202ENSMUST00000110808 Cdk19Q8BWD8 501 aa18.03■□□□□ 0.48
Ino80-202ENSMUST00000110808 Rsph4aQ8BYM7 716 aa18.03■□□□□ 0.48
Ino80-202ENSMUST00000110808 PtprgQ05909 1442 aa18.03■□□□□ 0.48
Ino80-202ENSMUST00000110808 SphkapQ6NSW3 1687 aa18.03■□□□□ 0.48
Ino80-202ENSMUST00000110808 Abcc1O35379 1528 aa18.03■□□□□ 0.48
Ino80-202ENSMUST00000110808 Chmp4bQ9D8B3 224 aaKnown RBP18.02■□□□□ 0.48
Ino80-202ENSMUST00000110808 Rbm25B2RY56 838 aaKnown RBP18.02■□□□□ 0.48
Ino80-202ENSMUST00000110808 Q3TQI7 289 aaKnown RBP18.02■□□□□ 0.48
Ino80-202ENSMUST00000110808 Stk31Q99MW1 1018 aa18.02■□□□□ 0.47
Ino80-202ENSMUST00000110808 Lrrc9Q8CDN9 1456 aa18.01■□□□□ 0.47
Ino80-202ENSMUST00000110808 Ccdc146E9Q9F7 977 aa17.99■□□□□ 0.47
Ino80-202ENSMUST00000110808 Kank1E9Q238 1360 aa17.99■□□□□ 0.47
Ino80-202ENSMUST00000110808 Cc2d1aQ8K1A6 943 aa17.99■□□□□ 0.47
Ino80-202ENSMUST00000110808 Adgrl2Q8JZZ7 1487 aa17.98■□□□□ 0.47
Ino80-202ENSMUST00000110808 Rusc2Q80U22 1514 aa17.98■□□□□ 0.47
Ino80-202ENSMUST00000110808 Lrriq1Q0P5X1 1673 aa17.98■□□□□ 0.47
Ino80-202ENSMUST00000110808 Kiaa1551Q5DTW7 1521 aa17.97■□□□□ 0.47
Ino80-202ENSMUST00000110808 Abcc2Q8VI47 1543 aa17.97■□□□□ 0.47
Ino80-202ENSMUST00000110808 OvosQ3UU35 1456 aa17.97■□□□□ 0.47
Ino80-202ENSMUST00000110808 Usp16Q99LG0 825 aa17.96■□□□□ 0.47
Ino80-202ENSMUST00000110808 Slc52a2Q9D8F3 450 aa17.96■□□□□ 0.47
Ino80-202ENSMUST00000110808 Swt1Q9DBQ9 907 aa17.96■□□□□ 0.47
Ino80-202ENSMUST00000110808 Ccdc183A2AJB1 534 aa17.95■□□□□ 0.46
Ino80-202ENSMUST00000110808 HnrnpuQ8VEK3 800 aaKnown RBP17.95■□□□□ 0.46
Ino80-202ENSMUST00000110808 Hsp90b1P08113 802 aaKnown RBP17.95■□□□□ 0.46
Ino80-202ENSMUST00000110808 Cavin4A2AMM0 362 aa17.94■□□□□ 0.46
Ino80-202ENSMUST00000110808 Gm156Q58A37 223 aa17.94■□□□□ 0.46
Ino80-202ENSMUST00000110808 Gm21190A0A0G2JGJ6 266 aa17.94■□□□□ 0.46
Ino80-202ENSMUST00000110808 Erbb3Q61526 1339 aa17.94■□□□□ 0.46
Ino80-202ENSMUST00000110808 FanciQ8K368 1330 aa17.94■□□□□ 0.46
Ino80-202ENSMUST00000110808 Ap3b2Q9JME5 1082 aa17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms