RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Prrc2bQ7TPM1 1486 aaKnown RBP44■■■■■ 4.63
Ctdnep1-201ENSMUST00000108593 Rgl3Q3UYI5 709 aa43.95■■■■■ 4.63
Ctdnep1-201ENSMUST00000108593 Dip2aQ8BWT5 1523 aa43.95■■■■■ 4.63
Ctdnep1-201ENSMUST00000108593 Txndc2Q6P902 515 aa43.92■■■■■ 4.62
Ctdnep1-201ENSMUST00000108593 Gemin5Q8BX17 1502 aaKnown RBP43.9■■■■■ 4.62
Ctdnep1-201ENSMUST00000108593 Rimbp3Q3V0F0 1606 aa43.89■■■■■ 4.62
Ctdnep1-201ENSMUST00000108593 Arid4bA2CG63 1314 aaKnown RBP43.85■■■■■ 4.61
Ctdnep1-201ENSMUST00000108593 Scaf11E9PZM7 1456 aaKnown RBP43.83■■■■■ 4.61
Ctdnep1-201ENSMUST00000108593 P3h3Q8CG70 732 aa43.81■■■■■ 4.6
Ctdnep1-201ENSMUST00000108593 AU022751B1B0V2 589 aa43.8■■■■■ 4.6
Ctdnep1-201ENSMUST00000108593 Scn4aQ9ER60 1841 aa43.79■■■■■ 4.6
Ctdnep1-201ENSMUST00000108593 Psme1P97371 249 aa43.78■■■■■ 4.6
Ctdnep1-201ENSMUST00000108593 Tulp4Q9JIL5 1547 aa43.77■■■■■ 4.6
Ctdnep1-201ENSMUST00000108593 Adamts13Q769J6 1426 aa43.77■■■■■ 4.6
Ctdnep1-201ENSMUST00000108593 Zc3h13E9Q784 1729 aaKnown RBP43.76■■■■■ 4.6
Ctdnep1-201ENSMUST00000108593 PplQ9R269 1755 aa43.75■■■■■ 4.59
Ctdnep1-201ENSMUST00000108593 Ncoa1P70365 1447 aa43.73■■■■■ 4.59
Ctdnep1-201ENSMUST00000108593 Plxnc1Q9QZC2 1574 aa43.72■■■■■ 4.59
Ctdnep1-201ENSMUST00000108593 Rims2Q9EQZ7 1530 aa43.72■■■■■ 4.59
Ctdnep1-201ENSMUST00000108593 Rims1Q99NE5 1463 aa43.72■■■■■ 4.59
Ctdnep1-201ENSMUST00000108593 Phlpp1Q8CHE4 1687 aa43.72■■■■■ 4.59
Ctdnep1-201ENSMUST00000108593 TonslQ6NZL6 1363 aa43.71■■■■■ 4.59
Ctdnep1-201ENSMUST00000108593 Lmtk3Q5XJV6 1424 aa43.71■■■■■ 4.59
Ctdnep1-201ENSMUST00000108593 Gm13695A2AK44 830 aa43.69■■■■■ 4.58
Ctdnep1-201ENSMUST00000108593 Ifit1bl1D3Z6F0 470 aa43.68■■■■■ 4.58
Ctdnep1-201ENSMUST00000108593 PalldQ9ET54 1408 aa43.65■■■■■ 4.58
Ctdnep1-201ENSMUST00000108593 Eif2ak4Q9QZ05 1648 aa43.63■■■■■ 4.57
Ctdnep1-201ENSMUST00000108593 Myom1Q62234 1667 aaKnown RBP43.62■■■■■ 4.57
Ctdnep1-201ENSMUST00000108593 Grwd1Q810D6 446 aaKnown RBP43.61■■■■■ 4.57
Ctdnep1-201ENSMUST00000108593 Myo3aQ8K3H5 1613 aa43.6■■■■■ 4.57
Ctdnep1-201ENSMUST00000108593 Atp1b4Q99ME6 356 aa43.59■■■■■ 4.57
Ctdnep1-201ENSMUST00000108593 Neurod1Q60867 357 aa43.58■■■■■ 4.57
Ctdnep1-201ENSMUST00000108593 Pip4k2bQ80XI4 416 aa43.58■■■■■ 4.57
Ctdnep1-201ENSMUST00000108593 Iqgap1Q9JKF1 1657 aaKnown RBP43.56■■■■■ 4.56
Ctdnep1-201ENSMUST00000108593 Polr3aB2RXC6 1390 aa43.55■■■■■ 4.56
Ctdnep1-201ENSMUST00000108593 Arhgef28P97433 1693 aa43.55■■■■■ 4.56
Ctdnep1-201ENSMUST00000108593 Ltbp4Q8K4G1 1666 aa43.55■■■■■ 4.56
Ctdnep1-201ENSMUST00000108593 IghaA0A0A6YXW6 389 aa43.55■■■■■ 4.56
Ctdnep1-201ENSMUST00000108593 Cdk13Q69ZA1 1511 aaKnown RBP43.53■■■■■ 4.56
Ctdnep1-201ENSMUST00000108593 Slc52a2Q9D8F3 450 aa43.53■■■■■ 4.56
Ctdnep1-201ENSMUST00000108593 Shq1Q7TMX5 569 aa43.51■■■■■ 4.56
Ctdnep1-201ENSMUST00000108593 Kdm2aP59997 1161 aa43.51■■■■■ 4.56
Ctdnep1-201ENSMUST00000108593 Slit3Q9WVB4 1523 aa43.5■■■■■ 4.55
Ctdnep1-201ENSMUST00000108593 Cpsf1Q9EPU4 1441 aaKnown RBP43.5■■■■■ 4.55
Ctdnep1-201ENSMUST00000108593 Cep152A2AUM9 1736 aaKnown RBP43.49■■■■■ 4.55
Ctdnep1-201ENSMUST00000108593 Srpk2O54781 681 aaKnown RBP43.48■■■■■ 4.55
Ctdnep1-201ENSMUST00000108593 Q9D9H8 365 aa43.48■■■■■ 4.55
Ctdnep1-201ENSMUST00000108593 Setd1aE9PYH6 1716 aa43.45■■■■■ 4.55
Ctdnep1-201ENSMUST00000108593 Asxl2Q8BZ32 1370 aa43.44■■■■■ 4.54
Ctdnep1-201ENSMUST00000108593 Mbd5B1AYB6 1498 aa43.44■■■■■ 4.54
Ctdnep1-201ENSMUST00000108593 Nrxn3Q6P9K9 1571 aa43.44■■■■■ 4.54
Ctdnep1-201ENSMUST00000108593 Rapgef3Q8VCC8 918 aa43.44■■■■■ 4.54
Ctdnep1-201ENSMUST00000108593 PzpQ61838 1495 aa43.41■■■■■ 4.54
Ctdnep1-201ENSMUST00000108593 Os9Q8K2C7 672 aa43.4■■■■■ 4.54
Ctdnep1-201ENSMUST00000108593 Med1Q925J9 1575 aa43.4■■■■■ 4.54
Ctdnep1-201ENSMUST00000108593 Gm20521D3Z5F7 333 aa43.39■■■■■ 4.54
Ctdnep1-201ENSMUST00000108593 Fan1Q69ZT1 1020 aa43.38■■■■■ 4.54
Ctdnep1-201ENSMUST00000108593 Mug2P28666 1451 aa43.38■■■■■ 4.53
Ctdnep1-201ENSMUST00000108593 MaddQ80U28 1577 aa43.32■■■■■ 4.53
Ctdnep1-201ENSMUST00000108593 Pik3r4Q8VD65 1358 aa43.32■■■■■ 4.53
Ctdnep1-201ENSMUST00000108593 Puf60Q3UEB3 564 aaKnown RBP43.31■■■■■ 4.52
Ctdnep1-201ENSMUST00000108593 Cdk5rap2Q8K389 1822 aa43.25■■■■■ 4.51
Ctdnep1-201ENSMUST00000108593 Dapk1Q80YE7 1442 aa43.22■■■■■ 4.51
Ctdnep1-201ENSMUST00000108593 Arap3Q8R5G7 1538 aa43.2■■■■■ 4.51
Ctdnep1-201ENSMUST00000108593 Lrrc7Q80TE7 1490 aa43.18■■■■■ 4.5
Ctdnep1-201ENSMUST00000108593 Thsd7aQ69ZU6 1645 aa43.16■■■■■ 4.5
Ctdnep1-201ENSMUST00000108593 Las1lA2BE28 776 aaKnown RBP43.15■■■■■ 4.5
Ctdnep1-201ENSMUST00000108593 Rundc1Q0VDN7 615 aa43.14■■■■■ 4.5
Ctdnep1-201ENSMUST00000108593 Tubgcp6G5E8P0 1769 aa43.13■■■■■ 4.5
Ctdnep1-201ENSMUST00000108593 Stk26Q99JT2 416 aa43.13■■■■■ 4.49
Ctdnep1-201ENSMUST00000108593 Utp14aQ640M1 767 aaKnown RBP43.12■■■■■ 4.49
Ctdnep1-201ENSMUST00000108593 Ppargc1bQ8VHJ7 1014 aa43.11■■■■■ 4.49
Ctdnep1-201ENSMUST00000108593 Usp40Q8BWR4 1235 aa43.09■■■■■ 4.49
Ctdnep1-201ENSMUST00000108593 RalgapbQ8BQZ4 1484 aa43.09■■■■■ 4.49
Ctdnep1-201ENSMUST00000108593 HnrnpmQ9D0E1 729 aaKnown RBP43.08■■■■■ 4.49
Ctdnep1-201ENSMUST00000108593 Gli3Q61602 1583 aa43.07■■■■■ 4.49
Ctdnep1-201ENSMUST00000108593 Card11Q8CIS0 1159 aa43.07■■■■■ 4.48
Ctdnep1-201ENSMUST00000108593 Stard8Q8K031 1019 aa43.07■■■■■ 4.48
Ctdnep1-201ENSMUST00000108593 Sipa1l1Q8C0T5 1782 aa43.05■■■■■ 4.48
Ctdnep1-201ENSMUST00000108593 IqubQ8CDK3 788 aa43.05■■■■■ 4.48
Ctdnep1-201ENSMUST00000108593 Cps1Q8C196 1500 aa43.05■■■■■ 4.48
Ctdnep1-201ENSMUST00000108593 Rpgrip1Q9EPQ2 1331 aa43.04■■■■■ 4.48
Ctdnep1-201ENSMUST00000108593 Nphp4P59240 1425 aa43.03■■■■■ 4.48
Ctdnep1-201ENSMUST00000108593 Plekhg1F6S200 1446 aa43.02■■■■■ 4.48
Ctdnep1-201ENSMUST00000108593 Tns3Q5SSZ5 1440 aa43.01■■■■■ 4.48
Ctdnep1-201ENSMUST00000108593 DnmbpQ6TXD4 1580 aa42.99■■■■■ 4.47
Ctdnep1-201ENSMUST00000108593 Gtf2e1Q9D0D5 440 aa42.97■■■■■ 4.47
Ctdnep1-201ENSMUST00000108593 Stag3O70576 1240 aa42.96■■■■■ 4.47
Ctdnep1-201ENSMUST00000108593 Cep170bQ80U49 1574 aa42.96■■■■■ 4.47
Ctdnep1-201ENSMUST00000108593 Srcin1Q9QWI6 1250 aa42.95■■■■■ 4.47
Ctdnep1-201ENSMUST00000108593 Ift172Q6VH22 1749 aa42.89■■■■■ 4.46
Ctdnep1-201ENSMUST00000108593 Col18a1P39061 1774 aa42.83■■■■■ 4.45
Ctdnep1-201ENSMUST00000108593 Rock2P70336 1388 aa42.82■■■■■ 4.44
Ctdnep1-201ENSMUST00000108593 Tmem94Q7TSH8 1360 aa42.81■■■■■ 4.44
Ctdnep1-201ENSMUST00000108593 Unc13bQ9Z1N9 1602 aa42.79■■■■■ 4.44
Ctdnep1-201ENSMUST00000108593 Slain2Q8CI08 581 aa42.79■■■■■ 4.44
Ctdnep1-201ENSMUST00000108593 Atp2b2Q9R0K7 1198 aa42.76■■■■■ 4.44
Ctdnep1-201ENSMUST00000108593 Q3UJC8 639 aa42.75■■■■■ 4.43
Ctdnep1-201ENSMUST00000108593 Itsn2Q9Z0R6 1659 aa42.74■■■■■ 4.43
Ctdnep1-201ENSMUST00000108593 Zbtb4Q5F293 982 aa42.74■■■■■ 4.43
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms