RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Rad54l2Q99NG0 1466 aa19.73■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Utp14aQ640M1 767 aaKnown RBP19.72■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Txndc2Q6P902 515 aa19.72■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Rpgrip1lQ8CG73 1264 aa19.72■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Psme1P97371 249 aa19.72■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Stard8Q8K031 1019 aa19.72■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 PtprkP35822 1457 aa19.72■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Zscan10Q3URR7 782 aa19.71■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Top2bQ64511 1612 aa19.71■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Pank1Q8K4K6 548 aa19.71■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Q9D2X8 372 aa19.71■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Dixdc1Q80Y83 711 aa19.71■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Ccdc30Q8BVF4 654 aa19.71■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Ncapd3Q6ZQK0 1506 aa19.71■□□□□ 0.75
Sptbn4-202ENSMUST00000108362 Nol12Q8BG17 217 aa19.7■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Ankrd36D3Z4K0 1415 aa19.7■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Podxl2Q8CAE9 603 aa19.69■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Duox2A2AQ99 1517 aa19.69■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 KinQ8K339 391 aa19.69■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Cux1P53564 1515 aa19.68■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Tpm1P58771 284 aa19.68■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Q8BT18 775 aa19.68■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 PogkQ80TC5 607 aa19.68■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Gabpb2P81069 414 aa19.68■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Frmpd1A2AKB4 1549 aa19.68■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Grin2bQ01097 1482 aa19.67■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 CenpjQ569L8 1344 aa19.67■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Cc2d2bA0A286YDU8 1405 aa19.67■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Map3k1P53349 1493 aa19.67■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Gm21969J3QJZ1 289 aa19.67■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Atl3Q91YH5 541 aa19.67■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Tdrd9Q14BI7 1383 aa19.66■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Pnmal2G3X9N3 661 aa19.65■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Smc3Q9CW03 1217 aaKnown RBP19.65■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Arhgef5E9Q7D5 1581 aa19.65■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Vps8Q0P5W1 1427 aa19.65■□□□□ 0.74
Sptbn4-202ENSMUST00000108362 Usp40Q8BWR4 1235 aa19.64■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Dapk1Q80YE7 1442 aa19.64■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 A0A0U1RNP2 1173 aa19.64■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Polr1aO35134 1717 aaKnown RBP19.63■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Krt82Q99M74 516 aa19.63■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Cplx2P84086 134 aa19.63■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Fam193aQ8CGI1 1231 aaKnown RBP19.63■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Mroh2bQ7M6Y6 1581 aa19.63■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Tnpo1Q8BFY9 898 aaKnown RBP19.63■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 AppP12023 770 aa19.63■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Ccdc34Q3UI66 367 aa19.63■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Stk11ipQ3TAA7 1072 aa19.62■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Wdr78E9PYY5 807 aa19.62■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Ppp1r18Q8BQ30 594 aa19.62■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Ipo7Q9EPL8 1038 aaKnown RBP19.62■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Nek4Q9Z1J2 792 aa19.62■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Isy1Q69ZQ2 285 aaKnown RBP19.62■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Cabp4Q8VHC5 271 aa19.62■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Fam13bQ8K2H3 851 aa19.61■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Mad1l1Q9WTX8 717 aaKnown RBP19.61■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Ccdc173A0JLY1 547 aa19.61■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Nectin2P32507 530 aa19.61■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Ccdc47Q9D024 483 aaKnown RBP19.61■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Jph4Q80WT0 628 aa19.6■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Nutm1Q8BHP2 1126 aa19.6■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Rbm10Q99KG3 930 aaKnown RBP19.6■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Tceal9Q9DD24 104 aa19.6■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Rrp9Q91WM3 475 aaKnown RBP19.6■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Cplx1P63040 134 aa19.59■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Zfp644E9QA22 1323 aa19.59■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Slc4a2P13808 1237 aaKnown RBP19.59■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Rec8Q8C5S7 591 aa19.59■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 PogzQ8BZH4 1409 aaKnown RBP19.58■□□□□ 0.73
Sptbn4-202ENSMUST00000108362 Srek1Q8BZX4 494 aaKnown RBP19.58■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 AampJ3QN89 436 aa19.57■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Anp32eP97822 260 aaKnown RBP19.57■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 FosbP13346 338 aa19.57■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Kif3aP28741 701 aa19.57■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Tpm2P58774 284 aa19.57■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Hmgn5Q9JL35 406 aa19.57■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Ric3Q8BPM6 367 aa19.57■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Hnrnpul1Q8VDM6 859 aaKnown RBP19.57■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 NaspQ99MD9 773 aaKnown RBP19.56■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 EzrP26040 586 aaKnown RBP19.56■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Znhit6Q3UFB2 460 aaKnown RBP19.55■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Q7TT23 1179 aa19.55■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 HdgfP51859 237 aaKnown RBP19.55■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Rnf20Q5DTM8 973 aa19.55■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Ncoa2Q61026 1462 aa19.55■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Usp48Q3V0C5 1052 aa19.55■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Vps53Q8CCB4 832 aa19.55■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Cetn4Q8K4K1 168 aa19.54■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Usp16Q99LG0 825 aa19.54■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Mink1Q9JM52 1308 aa19.53■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Kri1Q8VDQ9 704 aaKnown RBP19.53■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Tiam1Q60610 1591 aa19.53■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Ggt6Q6PDE7 497 aa19.53■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Hmox1P14901 289 aa19.52■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Zfp444Q3TDV8 331 aaKnown RBP19.52■□□□□ 0.72
Sptbn4-202ENSMUST00000108362 Evc2Q8K1G2 1220 aa19.52■□□□□ 0.71
Sptbn4-202ENSMUST00000108362 Urb2E9Q7L1 1524 aaKnown RBP19.52■□□□□ 0.71
Sptbn4-202ENSMUST00000108362 Kcnh8P59111 1102 aa19.51■□□□□ 0.71
Sptbn4-202ENSMUST00000108362 Ppp2r3aB2RXC8 1150 aa19.51■□□□□ 0.71
Sptbn4-202ENSMUST00000108362 Tpm4Q6IRU2 248 aa19.51■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms