RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 SlkO54988 1233 aa8.37□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Fam43aQ8BUP8 424 aa8.36□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Gpatch11Q3UFS4 262 aa8.36□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Ubxn4Q8VCH8 506 aa8.36□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Ankrd36D3Z4K0 1415 aa8.36□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Slc4a3P16283 1227 aa8.36□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Smarca2Q6DIC0 1577 aa8.36□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Slc4a10Q5DTL9 1118 aa8.36□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Tsen2Q6P7W5 460 aa8.35□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Cetn4Q8K4K1 168 aa8.35□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Utp3Q9JI13 469 aaKnown RBP8.35□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Gnl3lQ6PGG6 577 aaKnown RBP8.35□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Hmgb1P63158 215 aaKnown RBP8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Cux2P70298 1426 aa8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 NexnQ7TPW1 607 aa8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Smc2Q8CG48 1191 aaKnown RBP8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Psma5Q9Z2U1 241 aaKnown RBP8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Slc4a1apE9PX68 744 aa8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Pip4k2aO70172 405 aa8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Chmp7Q8R1T1 451 aa8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Znf330Q922H9 316 aa8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Rabep1O35551 862 aa8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Mcm2P97310 904 aa8.34□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Plin1Q8CGN5 517 aa8.34□□□□□ -1.08
Scn3a-202ENSMUST00000100069 CrbnQ8C7D2 445 aa8.33□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Cabp1Q9JLK7 227 aa8.33□□□□□ -1.08
Scn3a-202ENSMUST00000100069 GsdmaQ9EST1 446 aa8.33□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Trim58Q5NCC9 485 aa8.33□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Fbxo2Q80UW2 297 aa8.33□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Kif3bQ61771 747 aa8.33□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Tubb6Q922F4 447 aa8.33□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Usp47Q8BY87 1376 aa8.33□□□□□ -1.08
Scn3a-202ENSMUST00000100069 March6Q6ZQ89 909 aa8.33□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Nsd2Q8BVE8 1365 aa8.32□□□□□ -1.08
Scn3a-202ENSMUST00000100069 G3bp1P97855 465 aaKnown RBP8.32□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Bicd2Q921C5 820 aa8.32□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Luc7lQ9CYI4 371 aaKnown RBP8.32□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Ccdc146E9Q9F7 977 aa8.32□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Pak3Q61036 559 aa8.32□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Hmgb2P30681 210 aaKnown RBP8.32□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Sox12Q04890 314 aa8.32□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Ccdc60Q8C4J0 545 aa8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Mns1Q61884 491 aa8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Smc3Q9CW03 1217 aaKnown RBP8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 FanciQ8K368 1330 aa8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 PdcQ9QW08 244 aa8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 PnisrA2AJT4 805 aaKnown RBP8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Pdcl3Q8BVF2 240 aa8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Smarca4Q3TKT4 1613 aaKnown RBP8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Utp14aQ640M1 767 aaKnown RBP8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 OptnQ8K3K8 584 aa8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Ccdc171E9Q1U1 1324 aa8.31□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Cfap99A0A140LIX9 648 aa8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 CrcpO35427 148 aa8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Dhx16G3X8X0 1044 aaKnown RBP8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Erlin2Q8BFZ9 340 aa8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Gnai1B2RSH2 354 aa8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Gnai3Q9DC51 354 aa8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Ercc6lQ8BHK9 1240 aa8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Ccdc88bQ4QRL3 1481 aa8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 TimelessQ9R1X4 1197 aa8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Ccp110Q7TSH4 1004 aa8.3□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Prm3Q62100 101 aa8.29□□□□□ -1.08
Scn3a-202ENSMUST00000100069 TxlnbQ8VBT1 685 aa8.29□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Cabp4Q8VHC5 271 aa8.29□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Lrrc45Q8CIM1 670 aa8.29□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Phldb1Q6PDH0 1371 aaKnown RBP8.29□□□□□ -1.08
Scn3a-202ENSMUST00000100069 ErbinQ80TH2 1402 aa8.29□□□□□ -1.08
Scn3a-202ENSMUST00000100069 AnlnQ8K298 1121 aaKnown RBP8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Cdkn1cP49919 348 aa8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Fam184bQ0KK56 942 aa8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Drc7Q6V3W6 876 aa8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Ints3Q7TPD0 1041 aaKnown RBP8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Dhx29Q6PGC1 1365 aaKnown RBP8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Plekhh1Q80TI1 1356 aa8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Cep112Q5PR68 954 aa8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Paf1Q8K2T8 535 aa8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Sycp2Q9CUU3 1500 aa8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Fan1Q69ZT1 1020 aa8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Kiaa0753Q6A000 959 aa8.28□□□□□ -1.08
Scn3a-202ENSMUST00000100069 Pank3Q8R2W9 370 aa8.27□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Mical1Q8VDP3 1048 aa8.27□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Prl7d1P04769 244 aa8.27□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Arid3cA6PWV5 409 aa8.27□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Eif3aP23116 1344 aaKnown RBP8.27□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Phldb2Q8K1N2 1249 aa8.27□□□□□ -1.09
Scn3a-202ENSMUST00000100069 AcrbpQ3V140 540 aa8.26□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Gps2Q921N8 327 aa8.26□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Dixdc1Q80Y83 711 aa8.26□□□□□ -1.09
Scn3a-202ENSMUST00000100069 1700010I14RikQ7TPG0 532 aa8.26□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Def6Q8C2K1 630 aa8.26□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Dapk1Q80YE7 1442 aa8.26□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Sycp1Q62209 993 aa8.26□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Me1P06801 572 aa8.25□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Pibf1E9Q6K3 756 aa8.25□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Plcd4Q8K3R3 807 aa8.25□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Nop14Q8R3N1 860 aaKnown RBP8.25□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Nolc1E9Q5C9 702 aaKnown RBP8.25□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Pnmal2G3X9N3 661 aa8.25□□□□□ -1.09
Scn3a-202ENSMUST00000100069 Stim1P70302 685 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 78.8 ms