RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 GsdmaQ9EST1 446 aa12.84□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Rabep1O35551 862 aa12.84□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Trim58Q5NCC9 485 aa12.84□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Utp3Q9JI13 469 aaKnown RBP12.84□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Slc4a10Q5DTL9 1118 aa12.83□□□□□ -0.35
Col6a3-202ENSMUST00000097653 Stk31Q99MW1 1018 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Sh3bgrQ9WUZ7 214 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Gcom1E9PZ54 550 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 MyzapQ3UIJ9 466 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Gripap1Q8VD04 806 aa12.83□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Gprasp1Q5U4C1 1347 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Ak7Q9D2H2 614 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Hook1Q8BIL5 728 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Rab11fip3Q8CHD8 1047 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Ap3b2Q9JME5 1082 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 WrnO09053 1401 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Fam184bQ0KK56 942 aa12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Atad2bE9Q166 1460 aaKnown RBP12.82□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Plekhh1Q80TI1 1356 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Rfx1P48377 963 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Ccdc43Q9CR29 222 aaKnown RBP12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Znf771Q8BJ90 317 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 KinQ8K339 391 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 G3bp1P97855 465 aaKnown RBP12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Sycp1Q62209 993 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Kif4P33174 1231 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Pak3Q61036 559 aa12.81□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Phldb1Q6PDH0 1371 aaKnown RBP12.8□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Eif2s2Q99L45 331 aaKnown RBP12.8□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Ubap1lG3UW59 384 aa12.8□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Atl3Q91YH5 541 aa12.8□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Prkrip1Q9CWV6 186 aaKnown RBP12.79□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Sart1Q9Z315 806 aaKnown RBP12.79□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Arid4aF8VPQ2 1261 aaKnown RBP12.79□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Gabpb2P81069 414 aa12.79□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Dhx8A2A4P0 1244 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Pdcl3Q8BVF2 240 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Zscan10Q3URR7 782 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Utp14aQ640M1 767 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Cc2d2bA0A286YDU8 1405 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Srek1Q8BZX4 494 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 LrpprcQ6PB66 1392 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Kif7B7ZNG0 1348 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Shroom4Q1W617 1475 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 HmmrQ00547 794 aaKnown RBP12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Evc2Q8K1G2 1220 aa12.78□□□□□ -0.36
Col6a3-202ENSMUST00000097653 Esx1O88933 382 aa12.77□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Tceal9Q9DD24 104 aa12.77□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Smc4Q8CG47 1286 aa12.77□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Hmgn5Q9JL35 406 aa12.77□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Def6Q8C2K1 630 aa12.76□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Usp40Q8BWR4 1235 aa12.76□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Rnf20Q5DTM8 973 aa12.76□□□□□ -0.37
Col6a3-202ENSMUST00000097653 NaspQ99MD9 773 aaKnown RBP12.76□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Pnmal2G3X9N3 661 aa12.75□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Mrvi1Q9WUX5 899 aaKnown RBP12.75□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Tiam1Q60610 1591 aa12.75□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ccdc30Q8BVF4 654 aa12.75□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Cplx2P84086 134 aa12.74□□□□□ -0.37
Col6a3-202ENSMUST00000097653 AppP12023 770 aa12.74□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Dhx16G3X8X0 1044 aaKnown RBP12.74□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ccdc173A0JLY1 547 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Necab1Q8BG18 352 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Cabp4Q8VHC5 271 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 PhaxQ9JJT9 385 aaKnown RBP12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 ErbinQ80TH2 1402 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 EzrP26040 586 aaKnown RBP12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Znf710Q3U288 666 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Dhx29Q6PGC1 1365 aaKnown RBP12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Trim55G3X8Y1 545 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ncapd3Q6ZQK0 1506 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Cetn4Q8K4K1 168 aa12.73□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ncbp3Q8BZR9 615 aaKnown RBP12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Chmp4cQ9D7F7 232 aa12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Arhgef5E9Q7D5 1581 aa12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 KarsQ99MN1 595 aaKnown RBP12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Top2bQ64511 1612 aa12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Bicd2Q921C5 820 aa12.72□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Mns1Q61884 491 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Kif3aP28741 701 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Arhgap5P97393 1501 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Ccdc183A2AJB1 534 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Phactr2B1AVP0 632 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Gpatch3Q8BIY1 525 aa12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 Fam193aQ8CGI1 1231 aaKnown RBP12.71□□□□□ -0.37
Col6a3-202ENSMUST00000097653 BbxQ8VBW5 907 aa12.71□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Cplx1P63040 134 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Rpgrip1lQ8CG73 1264 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Nsd2Q8BVE8 1365 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Chrna2Q91X60 512 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Smc3Q9CW03 1217 aaKnown RBP12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Drc7Q6V3W6 876 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Cc2d1aQ8K1A6 943 aa12.7□□□□□ -0.38
Col6a3-202ENSMUST00000097653 UvssaQ9D479 717 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Rrp9Q91WM3 475 aaKnown RBP12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Dixdc1Q80Y83 711 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Ift140E9PY46 1464 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Ttll13A4Q9F6 804 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Erc2Q6PH08 957 aa12.69□□□□□ -0.38
Col6a3-202ENSMUST00000097653 Cchcr1Q8K2I2 770 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 101.8 ms