RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Map3k1P53349 1493 aa16.98■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Tpm3-rs7D3Z2H9 248 aa16.98■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Gpatch11Q3UFS4 262 aa16.98■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Mre11Q61216 706 aa16.98■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Gm7298A0A0N4SVU1 1476 aa16.98■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Grin2bQ01097 1482 aa16.97■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Plcd3Q8K2J0 785 aa16.97■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Arhgap31A6X8Z5 1425 aa16.96■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Gsto1O09131 240 aa16.96■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Gm21190A0A0G2JGJ6 266 aa16.96■□□□□ 0.3
Col18a1-201ENSMUST00000072755 PogzQ8BZH4 1409 aaKnown RBP16.95■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Ciz1Q8VEH2 845 aa16.94■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Arhgef5E9Q7D5 1581 aa16.94■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Mrvi1Q9WUX5 899 aaKnown RBP16.94■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Trim30aP15533 496 aa16.94■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Esx1O88933 382 aa16.93■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Puf60Q3UEB3 564 aaKnown RBP16.93■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Fyb1O35601 819 aa16.92■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Mrc2Q64449 1479 aa16.92■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Cd109Q8R422 1442 aa16.92■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Fgd6Q69ZL1 1399 aa16.91■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Chmp7Q8R1T1 451 aa16.91■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Smc4Q8CG47 1286 aa16.91■□□□□ 0.3
Col18a1-201ENSMUST00000072755 FanciQ8K368 1330 aa16.91■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Ccdc141E9Q8Q6 1531 aa16.91■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Calcoco2A2A6M5 331 aa16.9■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Ccdc47Q9D024 483 aaKnown RBP16.9■□□□□ 0.3
Col18a1-201ENSMUST00000072755 Cald1E9QA15 768 aaKnown RBP16.89■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Trim58Q5NCC9 485 aa16.89■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Gsdma3Q5Y4Y6 464 aa16.89■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Zfp644E9QA22 1323 aa16.89■□□□□ 0.29
Col18a1-201ENSMUST00000072755 BbxQ8VBW5 907 aa16.88■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Dusp27Q148W8 1138 aa16.88■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Mroh2bQ7M6Y6 1581 aa16.88■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Arap1Q4LDD4 1452 aa16.88■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Map3k5O35099 1380 aa16.88■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Paxip1Q6NZQ4 1056 aa16.88■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Arid4aF8VPQ2 1261 aaKnown RBP16.87■□□□□ 0.29
Col18a1-201ENSMUST00000072755 CrebrfQ8CDG5 640 aaKnown RBP16.87■□□□□ 0.29
Col18a1-201ENSMUST00000072755 AppP12023 770 aa16.87■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Gnai1B2RSH2 354 aa16.86■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Gnai3Q9DC51 354 aa16.86■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Rsph3aQ3UFY4 516 aa16.86■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Rpgrip1lQ8CG73 1264 aa16.86■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Frmpd1A2AKB4 1549 aa16.86■□□□□ 0.29
Col18a1-201ENSMUST00000072755 PnisrA2AJT4 805 aaKnown RBP16.85■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Atp2b2Q9R0K7 1198 aa16.85■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Ttll5Q8CHB8 1328 aa16.85■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Tceal9Q9DD24 104 aa16.85■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Usp16Q99LG0 825 aa16.84■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Q9D9H8 365 aa16.84■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Ccdc30Q8BVF4 654 aa16.84■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Myom3A2ABU4 1439 aa16.83■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Znf526Q8BI66 675 aa16.83■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Swt1Q9DBQ9 907 aa16.83■□□□□ 0.29
Col18a1-201ENSMUST00000072755 Ccer1Q9CQL2 403 aa16.83■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Phf14Q9D4H9 881 aa16.83■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Cc2d1aQ8K1A6 943 aa16.83■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Ncapd3Q6ZQK0 1506 aa16.82■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Triml2E9PW10 424 aa16.82■□□□□ 0.28
Col18a1-201ENSMUST00000072755 St18Q80TY4 1045 aa16.82■□□□□ 0.28
Col18a1-201ENSMUST00000072755 SetQ9EQU5 289 aaKnown RBP16.82■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Tiam1Q60610 1591 aa16.81■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Gm14025A2AP89 1413 aa16.81■□□□□ 0.28
Col18a1-201ENSMUST00000072755 RdxP26043 583 aaKnown RBP16.81■□□□□ 0.28
Col18a1-201ENSMUST00000072755 EprsQ8CGC7 1512 aaKnown RBP16.81■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Filip1lQ6P6L0 1131 aa16.81■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Tpd52l1O54818 204 aa16.8■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Ric3Q8BPM6 367 aa16.8■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Kif16bB1AVY7 1312 aa16.79■□□□□ 0.28
Col18a1-201ENSMUST00000072755 CadpsQ80TJ1 1355 aa16.79■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Il16O54824 1322 aa16.79■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Rbm25B2RY56 838 aaKnown RBP16.79■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Samd1D3YXK1 519 aa16.79■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Scaf1Q5U4C3 1256 aaKnown RBP16.79■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Fam163aQ8CAA5 168 aa16.79■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Atf3Q60765 181 aa16.78■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Eif2s2Q99L45 331 aaKnown RBP16.78■□□□□ 0.28
Col18a1-201ENSMUST00000072755 Plekhh1Q80TI1 1356 aa16.77■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Pdia4P08003 638 aaKnown RBP16.77■□□□□ 0.27
Col18a1-201ENSMUST00000072755 TatQ8QZR1 454 aa16.77■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Cspp1B2RX88 1205 aa16.76■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Casq1O09165 405 aa16.76■□□□□ 0.27
Col18a1-201ENSMUST00000072755 KinQ8K339 391 aa16.76■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Rab3gap2Q8BMG7 1366 aa16.76■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Ddx11Q6AXC6 880 aa16.75■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Nap1l3Q794H2 544 aa16.75■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Atl3Q91YH5 541 aa16.75■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Gprasp1Q5U4C1 1347 aa16.75■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Tmem132aQ922P8 1018 aa16.75■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Ppp2r1aQ76MZ3 589 aa16.74■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Sf3a1Q8K4Z5 791 aaKnown RBP16.74■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Znf710Q3U288 666 aa16.73■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Srek1Q8BZX4 494 aaKnown RBP16.73■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Camsap1A2AHC3 1581 aa16.73■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Kiaa1211Q5PR69 1207 aa16.73■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Sirt1Q923E4 737 aa16.73■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Plb1Q3TTY0 1478 aa16.73■□□□□ 0.27
Col18a1-201ENSMUST00000072755 Ccdc171E9Q1U1 1324 aa16.73■□□□□ 0.27
Col18a1-201ENSMUST00000072755 TchhA0A0B4J1F9 1599 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms