RNA–Protein interactions for RNA: ENSMUST00000071152.13

Rffl-202, Transcript of E3 ubiquitin-protein ligase rififylin, mousemouse

TSL 1 (best) BASIC

Gene Rffl, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rffl-202ENSMUST00000071152 Arhgef12Q8R4H2 1543 aaKnown RBP20.57■□□□□ 0.88
Rffl-202ENSMUST00000071152 Dnai1Q8C0M8 701 aa20.56■□□□□ 0.88
Rffl-202ENSMUST00000071152 Puf60Q3UEB3 564 aaKnown RBP20.56■□□□□ 0.88
Rffl-202ENSMUST00000071152 Kank1E9Q238 1360 aa20.55■□□□□ 0.88
Rffl-202ENSMUST00000071152 Abcc2Q8VI47 1543 aa20.54■□□□□ 0.88
Rffl-202ENSMUST00000071152 Vsig10D3YX43 558 aa20.52■□□□□ 0.88
Rffl-202ENSMUST00000071152 Prdm16A2A935 1275 aa20.52■□□□□ 0.88
Rffl-202ENSMUST00000071152 Mink1Q9JM52 1308 aa20.52■□□□□ 0.87
Rffl-202ENSMUST00000071152 Rab3gap2Q8BMG7 1366 aa20.51■□□□□ 0.87
Rffl-202ENSMUST00000071152 Tsen2Q6P7W5 460 aa20.51■□□□□ 0.87
Rffl-202ENSMUST00000071152 Fhod3Q76LL6 1578 aa20.51■□□□□ 0.87
Rffl-202ENSMUST00000071152 Ak7Q9D2H2 614 aa20.51■□□□□ 0.87
Rffl-202ENSMUST00000071152 Iqcf3Q9D498 203 aa20.51■□□□□ 0.87
Rffl-202ENSMUST00000071152 Fancd2Q80V62 1450 aa20.5■□□□□ 0.87
Rffl-202ENSMUST00000071152 Setbp1Q9Z180 1582 aa20.5■□□□□ 0.87
Rffl-202ENSMUST00000071152 Caskin1Q6P9K8 1431 aa20.5■□□□□ 0.87
Rffl-202ENSMUST00000071152 ErbinQ80TH2 1402 aa20.5■□□□□ 0.87
Rffl-202ENSMUST00000071152 Tmco5bQ80X59 307 aa20.5■□□□□ 0.87
Rffl-202ENSMUST00000071152 1700019A02RikA0A087WPV9 146 aa20.49■□□□□ 0.87
Rffl-202ENSMUST00000071152 NudcO35685 332 aaKnown RBP20.49■□□□□ 0.87
Rffl-202ENSMUST00000071152 Kiaa1551Q5DTW7 1521 aa20.48■□□□□ 0.87
Rffl-202ENSMUST00000071152 Nutm1Q8BHP2 1126 aa20.48■□□□□ 0.87
Rffl-202ENSMUST00000071152 Birc3O08863 600 aa20.47■□□□□ 0.87
Rffl-202ENSMUST00000071152 GsdmaQ9EST1 446 aa20.47■□□□□ 0.87
Rffl-202ENSMUST00000071152 Mroh2aD3Z750 1679 aa20.47■□□□□ 0.87
Rffl-202ENSMUST00000071152 Mapkbp1Q6NS57 1503 aa20.47■□□□□ 0.87
Rffl-202ENSMUST00000071152 NgefQ8CHT1 710 aa20.47■□□□□ 0.87
Rffl-202ENSMUST00000071152 Map3k4O08648 1597 aa20.47■□□□□ 0.87
Rffl-202ENSMUST00000071152 Cdc42bpaQ3UU96 1719 aa20.46■□□□□ 0.87
Rffl-202ENSMUST00000071152 KarsQ99MN1 595 aaKnown RBP20.46■□□□□ 0.87
Rffl-202ENSMUST00000071152 Mbd3Q9Z2D8 285 aaKnown RBP20.46■□□□□ 0.87
Rffl-202ENSMUST00000071152 Nsd2Q8BVE8 1365 aa20.45■□□□□ 0.86
Rffl-202ENSMUST00000071152 Mapk8ip3Q9ESN9 1337 aa20.45■□□□□ 0.86
Rffl-202ENSMUST00000071152 Setd1bQ8CFT2 1985 aa20.44■□□□□ 0.86
Rffl-202ENSMUST00000071152 Ppm1gQ61074 542 aa20.44■□□□□ 0.86
Rffl-202ENSMUST00000071152 Cpsf1Q9EPU4 1441 aaKnown RBP20.44■□□□□ 0.86
Rffl-202ENSMUST00000071152 Ttc21bQ0HA38 1315 aa20.43■□□□□ 0.86
Rffl-202ENSMUST00000071152 Shq1Q7TMX5 569 aa20.43■□□□□ 0.86
Rffl-202ENSMUST00000071152 Irx6Q9ER75 438 aa20.43■□□□□ 0.86
Rffl-202ENSMUST00000071152 PtprgQ05909 1442 aa20.42■□□□□ 0.86
Rffl-202ENSMUST00000071152 Atp10dQ8K2X1 1416 aa20.42■□□□□ 0.86
Rffl-202ENSMUST00000071152 Nectin2P32507 530 aa20.42■□□□□ 0.86
Rffl-202ENSMUST00000071152 Ipo8Q7TMY7 1010 aa20.41■□□□□ 0.86
Rffl-202ENSMUST00000071152 Mbd5B1AYB6 1498 aa20.41■□□□□ 0.86
Rffl-202ENSMUST00000071152 Plekhh1Q80TI1 1356 aa20.41■□□□□ 0.86
Rffl-202ENSMUST00000071152 Mfap1aC0HKD8 439 aaKnown RBP20.4■□□□□ 0.86
Rffl-202ENSMUST00000071152 Mfap1bC0HKD9 439 aaKnown RBP20.4■□□□□ 0.86
Rffl-202ENSMUST00000071152 Lrrc9Q8CDN9 1456 aa20.39■□□□□ 0.85
Rffl-202ENSMUST00000071152 Tarbp1E9Q368 1579 aa20.39■□□□□ 0.85
Rffl-202ENSMUST00000071152 Utp14aQ640M1 767 aaKnown RBP20.39■□□□□ 0.85
Rffl-202ENSMUST00000071152 U2surpQ6NV83 1029 aaKnown RBP20.38■□□□□ 0.85
Rffl-202ENSMUST00000071152 Zmym4A2A791 1549 aaKnown RBP20.37■□□□□ 0.85
Rffl-202ENSMUST00000071152 AI481877A2ALV5 1481 aa20.37■□□□□ 0.85
Rffl-202ENSMUST00000071152 Pibf1E9Q6K3 756 aa20.36■□□□□ 0.85
Rffl-202ENSMUST00000071152 Q9D9H8 365 aa20.36■□□□□ 0.85
Rffl-202ENSMUST00000071152 Dot1lQ6XZL8 1540 aa20.36■□□□□ 0.85
Rffl-202ENSMUST00000071152 Ccdc60Q8C4J0 545 aa20.35■□□□□ 0.85
Rffl-202ENSMUST00000071152 Lrriq1Q0P5X1 1673 aa20.34■□□□□ 0.85
Rffl-202ENSMUST00000071152 Ralbp1Q62172 648 aa20.34■□□□□ 0.85
Rffl-202ENSMUST00000071152 Znf608Q56A10 1511 aa20.33■□□□□ 0.85
Rffl-202ENSMUST00000071152 Irx3P81067 507 aa20.32■□□□□ 0.84
Rffl-202ENSMUST00000071152 Ccdc183A2AJB1 534 aa20.31■□□□□ 0.84
Rffl-202ENSMUST00000071152 DekQ7TNV0 380 aaKnown RBP20.31■□□□□ 0.84
Rffl-202ENSMUST00000071152 Edc4Q3UJB9 1406 aaKnown RBP20.3■□□□□ 0.84
Rffl-202ENSMUST00000071152 Trim58Q5NCC9 485 aa20.3■□□□□ 0.84
Rffl-202ENSMUST00000071152 Lamc1P02468 1607 aaKnown RBP20.3■□□□□ 0.84
Rffl-202ENSMUST00000071152 Ppp1r18Q8BQ30 594 aa20.3■□□□□ 0.84
Rffl-202ENSMUST00000071152 GorabQ8BRM2 368 aa20.3■□□□□ 0.84
Rffl-202ENSMUST00000071152 DroshaQ5HZJ0 1373 aaKnown RBP20.29■□□□□ 0.84
Rffl-202ENSMUST00000071152 Dusp27Q148W8 1138 aa20.29■□□□□ 0.84
Rffl-202ENSMUST00000071152 Ppp1r3fQ9JIG4 799 aa20.29■□□□□ 0.84
Rffl-202ENSMUST00000071152 Smc5Q8CG46 1101 aaKnown RBP20.27■□□□□ 0.83
Rffl-202ENSMUST00000071152 Ccar1Q8CH18 1146 aaKnown RBP20.27■□□□□ 0.83
Rffl-202ENSMUST00000071152 CenpjQ569L8 1344 aa20.26■□□□□ 0.83
Rffl-202ENSMUST00000071152 Plcb2A3KGF7 1181 aa20.25■□□□□ 0.83
Rffl-202ENSMUST00000071152 Adgrl2Q8JZZ7 1487 aa20.25■□□□□ 0.83
Rffl-202ENSMUST00000071152 Stard8Q8K031 1019 aa20.25■□□□□ 0.83
Rffl-202ENSMUST00000071152 Fmn2Q9JL04 1578 aa20.24■□□□□ 0.83
Rffl-202ENSMUST00000071152 Cald1E9QA15 768 aaKnown RBP20.24■□□□□ 0.83
Rffl-202ENSMUST00000071152 Gtf3c3Q3TMP1 882 aa20.23■□□□□ 0.83
Rffl-202ENSMUST00000071152 Uspl1Q3ULM6 1089 aa20.23■□□□□ 0.83
Rffl-202ENSMUST00000071152 Fam208aQ69ZR9 1610 aaKnown RBP20.23■□□□□ 0.83
Rffl-202ENSMUST00000071152 Atp2b2Q9R0K7 1198 aa20.23■□□□□ 0.83
Rffl-202ENSMUST00000071152 Ak9G3UYQ4 1894 aa20.23■□□□□ 0.83
Rffl-202ENSMUST00000071152 Pnmal2G3X9N3 661 aa20.22■□□□□ 0.83
Rffl-202ENSMUST00000071152 Aplp1Q03157 653 aa20.22■□□□□ 0.83
Rffl-202ENSMUST00000071152 Plcd4Q8K3R3 807 aa20.21■□□□□ 0.83
Rffl-202ENSMUST00000071152 Ythdc2B2RR83 1445 aaKnown RBP20.21■□□□□ 0.83
Rffl-202ENSMUST00000071152 Sox12Q04890 314 aa20.21■□□□□ 0.83
Rffl-202ENSMUST00000071152 Duxf3A0A0N4SV92 674 aa20.21■□□□□ 0.83
Rffl-202ENSMUST00000071152 Nkx1-2P42580 305 aa20.21■□□□□ 0.83
Rffl-202ENSMUST00000071152 Rlbp1Q9Z275 317 aa20.21■□□□□ 0.83
Rffl-202ENSMUST00000071152 Abcc6Q9R1S7 1498 aa20.2■□□□□ 0.82
Rffl-202ENSMUST00000071152 Tnpo1Q8BFY9 898 aaKnown RBP20.2■□□□□ 0.82
Rffl-202ENSMUST00000071152 Kdm5cP41230 1554 aa20.2■□□□□ 0.82
Rffl-202ENSMUST00000071152 Trpm2Q91YD4 1506 aa20.2■□□□□ 0.82
Rffl-202ENSMUST00000071152 Stk11ipQ3TAA7 1072 aa20.2■□□□□ 0.82
Rffl-202ENSMUST00000071152 Rusc2Q80U22 1514 aa20.19■□□□□ 0.82
Rffl-202ENSMUST00000071152 Rfx1P48377 963 aa20.19■□□□□ 0.82
Rffl-202ENSMUST00000071152 Gm16486A0A1D5RMD1 1434 aa20.19■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms