RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Tpm1P58771 284 aa17.8■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Srek1Q8BZX4 494 aaKnown RBP17.8■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 GsdmaQ9EST1 446 aa17.8■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Efcab5A0JP43 1406 aa17.8■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Zfp444Q3TDV8 331 aaKnown RBP17.79■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Tsen2Q6P7W5 460 aa17.79■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Znf771Q8BJ90 317 aa17.79■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Pdia4P08003 638 aaKnown RBP17.79■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Mns1Q61884 491 aa17.79■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Q3TQI7 289 aaKnown RBP17.78■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Zkscan1Q8BGS3 561 aaKnown RBP17.78■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Nop14Q8R3N1 860 aaKnown RBP17.78■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Kif7B7ZNG0 1348 aa17.78■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Ftsj3Q9DBE9 838 aaKnown RBP17.78■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 TimelessQ9R1X4 1197 aa17.77■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 NcapgE9PWG6 1004 aa17.77■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Rnf214Q8BFU3 668 aaKnown RBP17.77■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 PdcQ9QW08 244 aa17.77■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Pdcl2Q78Y63 240 aa17.76■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Brpf1B2RRD7 1212 aa17.76■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Mcm2P97310 904 aa17.75■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Dhx8A2A4P0 1244 aaKnown RBP17.75■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Arid3cA6PWV5 409 aa17.75■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Smc3Q9CW03 1217 aaKnown RBP17.75■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Pank1Q8K4K6 548 aa17.74■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 SkilQ60665 675 aa17.74■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Plekhg5Q66T02 1073 aa17.74■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Bicd2Q921C5 820 aa17.74■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 A0A1L1SQF0 893 aa17.73■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Ubxn4Q8VCH8 506 aa17.73■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Gse1Q3U3C9 1213 aa17.73■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Def6Q8C2K1 630 aa17.72■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Podxl2Q8CAE9 603 aa17.72■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Gtf3c5Q8R2T8 520 aa17.72■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Drc7Q6V3W6 876 aa17.71■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 PogkQ80TC5 607 aa17.71■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 CenpjQ569L8 1344 aa17.71■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 NgefQ8CHT1 710 aa17.71■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Cux2P70298 1426 aa17.71■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Smarca4Q3TKT4 1613 aaKnown RBP17.71■□□□□ 0.43
Pcdha1-201ENSMUST00000070797 Fam184aE9PW83 1143 aa17.7■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Polr3gQ6NXY9 223 aa17.7■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Cchcr1Q8K2I2 770 aa17.7■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Ipo7Q9EPL8 1038 aaKnown RBP17.7■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Znf692Q3U381 531 aa17.69■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Nek4Q9Z1J2 792 aa17.69■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Mcm4P49717 862 aa17.69■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Gabpb2P81069 414 aa17.69■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Phactr2B1AVP0 632 aa17.68■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 AnlnQ8K298 1121 aaKnown RBP17.68■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Phldb1Q6PDH0 1371 aaKnown RBP17.68■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Olfml1Q8BSH2 233 aa17.68■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Gcom1E9PZ54 550 aa17.67■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Trim55G3X8Y1 545 aa17.67■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 MyzapQ3UIJ9 466 aa17.67■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Dhx29Q6PGC1 1365 aaKnown RBP17.67■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Ccdc47Q9D024 483 aaKnown RBP17.67■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Ints3Q7TPD0 1041 aaKnown RBP17.67■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Gpatch3Q8BIY1 525 aa17.66■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Kcnh8P59111 1102 aa17.65■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Hook1Q8BIL5 728 aa17.65■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Ccdc171E9Q1U1 1324 aa17.65■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Rufy1Q8BIJ7 712 aa17.65■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Birc3O08863 600 aa17.65■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Rnf20Q5DTM8 973 aa17.65■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Q9D2X8 372 aa17.65■□□□□ 0.42
Pcdha1-201ENSMUST00000070797 Lemd3Q9WU40 921 aa17.64■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Kif3cO35066 796 aa17.64■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Clstn1Q9EPL2 979 aa17.64■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Samd1D3YXK1 519 aa17.63■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Gps2Q921N8 327 aa17.63■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Rab3gap2Q8BMG7 1366 aa17.63■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Chaf1aQ9QWF0 911 aa17.63■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Dnai2A2AC93 623 aa17.62■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Ddx11Q6AXC6 880 aa17.62■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Rec8Q8C5S7 591 aa17.62■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 ImpactO55091 318 aa17.61■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Ppp1r9bQ6R891 817 aaKnown RBP17.61■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Liat1Q810M6 228 aa17.61■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Triml2E9PW10 424 aa17.61■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Otud6bQ8K2H2 294 aa17.61■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Evc2Q8K1G2 1220 aa17.61■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 CastP51125 788 aa17.6■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 MlecQ6ZQI3 291 aaKnown RBP17.6■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Plin1Q8CGN5 517 aa17.6■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 L3mbtl2P59178 703 aa17.59■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Tpm4Q6IRU2 248 aa17.59■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Fez2Q6TYB5 348 aa17.59■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Tex2Q6ZPJ0 1128 aaKnown RBP17.59■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Mad1l1Q9WTX8 717 aaKnown RBP17.59■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Tmc1Q8R4P5 757 aa17.59■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Stk31Q99MW1 1018 aa17.59■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Smc5Q8CG46 1101 aaKnown RBP17.58■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 ScaperF8VQ70 1398 aaKnown RBP17.58■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Tmco3Q8BH01 678 aa17.58■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Cyp46a1Q9WVK8 500 aa17.58■□□□□ 0.41
Pcdha1-201ENSMUST00000070797 Cbx1P83917 185 aaKnown RBP17.58■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Arglu1Q3UL36 271 aaKnown RBP17.58■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Q7TT23 1179 aa17.58■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Stk26Q99JT2 416 aa17.58■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms