RNA–Protein interactions for RNA: ENSMUST00000068439.12

Pdlim1-201, Transcript of PDZ and LIM domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim1, Length 2,571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1-201ENSMUST00000068439 Cep152A2AUM9 1736 aaKnown RBP21.74■■□□□ 1.07
Pdlim1-201ENSMUST00000068439 Hfm1D3Z4R1 1434 aa21.73■■□□□ 1.07
Pdlim1-201ENSMUST00000068439 Afap1Q80YS6 731 aa21.73■■□□□ 1.07
Pdlim1-201ENSMUST00000068439 Dnajc5P60904 198 aa21.73■■□□□ 1.07
Pdlim1-201ENSMUST00000068439 Plekhg5Q66T02 1073 aa21.72■■□□□ 1.07
Pdlim1-201ENSMUST00000068439 Skint5A7XUY5 1461 aa21.71■■□□□ 1.07
Pdlim1-201ENSMUST00000068439 Nop58Q6DFW4 536 aaKnown RBP21.7■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 CltcQ68FD5 1675 aaKnown RBP21.7■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Arhgap23Q69ZH9 1483 aa21.7■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Mroh1E0CZ22 1640 aa21.69■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Setd1aE9PYH6 1716 aa21.69■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Dnajc5gQ8C632 165 aa21.68■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Ahdc1Q6PAL7 1594 aaKnown RBP21.67■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Kdm2aP59997 1161 aa21.67■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 RictorQ6QI06 1708 aa21.66■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Myo3aQ8K3H5 1613 aa21.66■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Plxnc1Q9QZC2 1574 aa21.65■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Adamtsl3G3UXC7 1706 aa21.64■■□□□ 1.06
Pdlim1-201ENSMUST00000068439 Smg6P61406 1418 aaKnown RBP21.64■■□□□ 1.05
Pdlim1-201ENSMUST00000068439 Gm20521D3Z5F7 333 aa21.61■■□□□ 1.05
Pdlim1-201ENSMUST00000068439 Srpk2O54781 681 aaKnown RBP21.61■■□□□ 1.05
Pdlim1-201ENSMUST00000068439 Cdk5rap2Q8K389 1822 aa21.6■■□□□ 1.05
Pdlim1-201ENSMUST00000068439 AU022751B1B0V2 589 aa21.6■■□□□ 1.05
Pdlim1-201ENSMUST00000068439 Pola1P33609 1465 aa21.59■■□□□ 1.05
Pdlim1-201ENSMUST00000068439 Os9Q8K2C7 672 aa21.58■■□□□ 1.05
Pdlim1-201ENSMUST00000068439 Srcin1Q9QWI6 1250 aa21.58■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Myom1Q62234 1667 aaKnown RBP21.57■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Fan1Q69ZT1 1020 aa21.56■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Stard8Q8K031 1019 aa21.56■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Prrc2bQ7TPM1 1486 aaKnown RBP21.55■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 PtprmP28828 1452 aa21.55■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Itsn1Q9Z0R4 1714 aa21.54■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Nphp4P59240 1425 aa21.54■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Kif13aQ9EQW7 1749 aa21.54■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Pcdh10E9PXQ7 1057 aa21.53■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 DnmbpQ6TXD4 1580 aa21.53■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Zbtb4Q5F293 982 aa21.53■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Med14A2ABV5 1459 aaKnown RBP21.53■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Sipa1l1Q8C0T5 1782 aa21.53■■□□□ 1.04
Pdlim1-201ENSMUST00000068439 Puf60Q3UEB3 564 aaKnown RBP21.51■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Slc52a2Q9D8F3 450 aa21.51■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Gm13695A2AK44 830 aa21.5■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Usp40Q8BWR4 1235 aa21.5■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Naip7Q9JIB3 1402 aa21.5■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Itsn2Q9Z0R6 1659 aa21.49■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Ercc6l2Q9JIM3 1537 aa21.49■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Tubgcp6G5E8P0 1769 aa21.49■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Plppr3Q7TPB0 716 aa21.49■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Gtf2e1Q9D0D5 440 aa21.49■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Slc24a1Q91WD8 1130 aa21.47■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Sbno1Q689Z5 1390 aa21.46■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 Lrrc7Q80TE7 1490 aa21.46■■□□□ 1.03
Pdlim1-201ENSMUST00000068439 PalldQ9ET54 1408 aa21.44■■□□□ 1.02
Pdlim1-201ENSMUST00000068439 Safb2Q80YR5 991 aaKnown RBP21.43■■□□□ 1.02
Pdlim1-201ENSMUST00000068439 Kdm5aQ3UXZ9 1690 aa21.43■■□□□ 1.02
Pdlim1-201ENSMUST00000068439 Ift172Q6VH22 1749 aa21.41■■□□□ 1.02
Pdlim1-201ENSMUST00000068439 PrxO55103 1391 aa21.4■■□□□ 1.02
Pdlim1-201ENSMUST00000068439 Zc3h13E9Q784 1729 aaKnown RBP21.4■■□□□ 1.02
Pdlim1-201ENSMUST00000068439 Arhgef28P97433 1693 aa21.39■■□□□ 1.02
Pdlim1-201ENSMUST00000068439 Chd2E9PZM4 1827 aaKnown RBP21.37■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Shq1Q7TMX5 569 aa21.37■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Pank3Q8R2W9 370 aa21.37■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 MaddQ80U28 1577 aa21.36■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Arid4bA2CG63 1314 aaKnown RBP21.36■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Eif2ak4Q9QZ05 1648 aa21.35■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Tmf1B9EKI3 1091 aa21.35■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 IqubQ8CDK3 788 aa21.35■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Atp1b4Q99ME6 356 aa21.35■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Dip2bQ3UH60 1574 aa21.34■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 PplQ9R269 1755 aa21.34■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Stag3O70576 1240 aa21.34■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Exoc6Q8R313 802 aa21.34■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Gemin5Q8BX17 1502 aaKnown RBP21.34■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Stra8P70278 393 aa21.34■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Wwc2Q6NXJ0 1187 aa21.33■■□□□ 1.01
Pdlim1-201ENSMUST00000068439 Slc4a1apE9PX68 744 aa21.32■■□□□ 1
Pdlim1-201ENSMUST00000068439 Gm16486A0A1D5RMD1 1434 aa21.31■■□□□ 1
Pdlim1-201ENSMUST00000068439 P3h3Q8CG70 732 aa21.31■■□□□ 1
Pdlim1-201ENSMUST00000068439 Inpp5dQ9ES52 1191 aa21.31■■□□□ 1
Pdlim1-201ENSMUST00000068439 Mrs2Q5NCE8 434 aa21.3■■□□□ 1
Pdlim1-201ENSMUST00000068439 Q9D9H8 365 aa21.3■■□□□ 1
Pdlim1-201ENSMUST00000068439 Fam184bQ0KK56 942 aa21.29■■□□□ 1
Pdlim1-201ENSMUST00000068439 Dip2aQ8BWT5 1523 aa21.29■■□□□ 1
Pdlim1-201ENSMUST00000068439 PnisrA2AJT4 805 aaKnown RBP21.29■■□□□ 1
Pdlim1-201ENSMUST00000068439 Zscan10Q3URR7 782 aa21.29■■□□□ 1
Pdlim1-201ENSMUST00000068439 Stk26Q99JT2 416 aa21.27■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 Txndc2Q6P902 515 aa21.26■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 CenpjQ569L8 1344 aa21.26■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 InsrP15208 1372 aa21.26■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 Cep170bQ80U49 1574 aa21.25■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 Plekhg1F6S200 1446 aa21.24■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 Psme1P97371 249 aa21.24■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 Slc4a2P13808 1237 aaKnown RBP21.24■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 Bcl9Q9D219 1425 aa21.23■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 4930407I10RikD3Z5T8 1512 aa21.22■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 Anks4bQ8K3X6 423 aa21.21■□□□□ 0.99
Pdlim1-201ENSMUST00000068439 Utp14aQ640M1 767 aaKnown RBP21.2■□□□□ 0.98
Pdlim1-201ENSMUST00000068439 Alpk3Q924C5 1678 aa21.19■□□□□ 0.98
Pdlim1-201ENSMUST00000068439 Anp32bQ9EST5 272 aaKnown RBP21.19■□□□□ 0.98
Pdlim1-201ENSMUST00000068439 Slit3Q9WVB4 1523 aa21.19■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms