RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Itsn2Q9Z0R6 1659 aa21.3■■□□□ 1
Ttc39b-202ENSMUST00000048274 Pde4cQ3UEI1 686 aa21.3■■□□□ 1
Ttc39b-202ENSMUST00000048274 Usp54Q8BL06 1588 aaKnown RBP21.3■■□□□ 1
Ttc39b-202ENSMUST00000048274 Inpp5dQ9ES52 1191 aa21.29■■□□□ 1
Ttc39b-202ENSMUST00000048274 AknaQ80VW7 1404 aa21.28■■□□□ 1
Ttc39b-202ENSMUST00000048274 Rab3gap2Q8BMG7 1366 aa21.26■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Ak9G3UYQ4 1894 aa21.26■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Abcc6Q9R1S7 1498 aa21.26■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Kidins220E9Q9B7 1793 aa21.25■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Kif16bB1AVY7 1312 aa21.25■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Fkbp15Q6P9Q6 1216 aaKnown RBP21.25■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Cep152A2AUM9 1736 aaKnown RBP21.24■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Ppp2r1aQ76MZ3 589 aa21.24■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Ifnlr1Q8CGK5 535 aa21.24■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Abcc1O35379 1528 aa21.23■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Mroh3A0A1D5RM54 893 aa21.22■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Kdm2bQ6P1G2 1309 aa21.22■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Ylpm1Q9R0I7 1386 aaKnown RBP21.22■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Xrn1P97789 1719 aaKnown RBP21.21■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Plekhh1Q80TI1 1356 aa21.21■□□□□ 0.99
Ttc39b-202ENSMUST00000048274 Fam184bQ0KK56 942 aa21.2■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Myo5cE9Q1F5 1742 aa21.2■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Srcin1Q9QWI6 1250 aa21.2■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Chd1P40201 1711 aa21.19■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Tmem131lQ3U3D7 1597 aa21.19■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Ttll13A4Q9F6 804 aa21.19■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Atp10dQ8K2X1 1416 aa21.18■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Stard8Q8K031 1019 aa21.17■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Kdm5aQ3UXZ9 1690 aa21.16■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Zfyve16Q80U44 1528 aa21.16■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Esx1O88933 382 aa21.15■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Rad21Q61550 635 aaKnown RBP21.15■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Iqcf3Q9D498 203 aa21.15■□□□□ 0.98
Ttc39b-202ENSMUST00000048274 Fndc1E9Q043 1732 aa21.14■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Slc4a1apE9PX68 744 aa21.13■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Rwdd1Q9CQK7 243 aa21.13■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Zbtb7cQ8VCZ7 619 aa21.11■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Nos1Q9Z0J4 1429 aa21.11■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Gprasp1Q5U4C1 1347 aa21.11■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Rims1Q99NE5 1463 aa21.11■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Map3k5O35099 1380 aa21.11■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Hsp90aa1P07901 733 aaKnown RBP21.11■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Trpm1Q2TV84 1622 aa21.1■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Abca8aQ8K442 1620 aa21.1■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 DnmbpQ6TXD4 1580 aa21.1■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Iqgap3F8VQ29 1632 aa21.1■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Nphp4P59240 1425 aa21.1■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Nkx1-2P42580 305 aa21.09■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Usp19Q3UJD6 1360 aa21.09■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 Igf1rQ60751 1373 aa21.09■□□□□ 0.97
Ttc39b-202ENSMUST00000048274 EspnQ9ET47 871 aa21.08■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Talpid3E9PV87 1520 aa21.06■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 KdrP35918 1367 aa21.06■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Myom1Q62234 1667 aaKnown RBP21.06■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Zbtb4Q5F293 982 aa21.06■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 CrbnQ8C7D2 445 aa21.05■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Ythdc2B2RR83 1445 aaKnown RBP21.05■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Cdk5rap2Q8K389 1822 aa21.05■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Znf518aB2RRF6 1478 aaKnown RBP21.05■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Smc5Q8CG46 1101 aaKnown RBP21.04■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Sipa1l1Q8C0T5 1782 aa21.03■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 AampJ3QN89 436 aa21.02■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Myom2Q14BI5 1463 aa21.02■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 Mapk8ip3Q9ESN9 1337 aa21.02■□□□□ 0.96
Ttc39b-202ENSMUST00000048274 ErbinQ80TH2 1402 aa21.01■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Kif7B7ZNG0 1348 aa21.01■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Ttc21bQ0HA38 1315 aa21.01■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Tmc1Q8R4P5 757 aa21.01■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Myo3aQ8K3H5 1613 aa21.01■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Topbp1Q6ZQF0 1515 aa21■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Gtf2e1Q9D0D5 440 aa21■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Abca6Q8K441 1624 aa21■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Uggt1Q6P5E4 1551 aa21■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Ccdc30Q8BVF4 654 aa20.99■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Abca9Q8K449 1623 aa20.99■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 ChgaP26339 463 aaKnown RBP20.99■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Ralbp1Q62172 648 aa20.99■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Adgrb3Q80ZF8 1522 aa20.99■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Ehbp1l1Q99MS7 1716 aa20.99■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Depdc5P61460 1591 aa20.98■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Gm20521D3Z5F7 333 aa20.97■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Efcab6Q6P1E8 1516 aa20.96■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Sall3Q62255 1320 aa20.96■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Tecpr2Q3UH45 1423 aa20.96■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 NudcO35685 332 aaKnown RBP20.96■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Uspl1Q3ULM6 1089 aa20.96■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Speer4f1Q9D5Q6 258 aa20.96■□□□□ 0.95
Ttc39b-202ENSMUST00000048274 Kdm2aP59997 1161 aa20.95■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Znf521Q6KAS7 1311 aa20.95■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Kiaa1107Q80TK0 1369 aa20.94■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Cfap65Q3V0B4 1847 aa20.94■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Map4k4P97820 1233 aaKnown RBP20.94■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Chmp5Q9D7S9 219 aa20.94■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 AatkQ80YE4 1365 aa20.94■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Akap12Q9WTQ5 1684 aa20.94■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Znf608Q56A10 1511 aa20.93■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Ppm1gQ61074 542 aa20.93■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Mre11Q61216 706 aa20.92■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Usp40Q8BWR4 1235 aa20.92■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Ncbp3Q8BZR9 615 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 159.9 ms