RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Stard8Q8K031 1019 aa18.56■□□□□ 0.56
Lime1-201ENSMUST00000048077 Ttc41Q692V3 1318 aa18.56■□□□□ 0.56
Lime1-201ENSMUST00000048077 Liat1Q810M6 228 aa18.55■□□□□ 0.56
Lime1-201ENSMUST00000048077 Ythdc2B2RR83 1445 aaKnown RBP18.55■□□□□ 0.56
Lime1-201ENSMUST00000048077 Erbb3Q61526 1339 aa18.55■□□□□ 0.56
Lime1-201ENSMUST00000048077 Iqgap3F8VQ29 1632 aa18.55■□□□□ 0.56
Lime1-201ENSMUST00000048077 Q7TT23 1179 aa18.55■□□□□ 0.56
Lime1-201ENSMUST00000048077 Atf7ipQ7TT18 1306 aa18.54■□□□□ 0.56
Lime1-201ENSMUST00000048077 Tcerg1Q8CGF7 1100 aaKnown RBP18.53■□□□□ 0.56
Lime1-201ENSMUST00000048077 Abca8aQ8K442 1620 aa18.53■□□□□ 0.56
Lime1-201ENSMUST00000048077 TnikP83510 1323 aa18.52■□□□□ 0.56
Lime1-201ENSMUST00000048077 Topbp1Q6ZQF0 1515 aa18.51■□□□□ 0.55
Lime1-201ENSMUST00000048077 Ttc21bQ0HA38 1315 aa18.51■□□□□ 0.55
Lime1-201ENSMUST00000048077 Abca6Q8K441 1624 aa18.51■□□□□ 0.55
Lime1-201ENSMUST00000048077 Rims1Q99NE5 1463 aa18.5■□□□□ 0.55
Lime1-201ENSMUST00000048077 Rab3gap2Q8BMG7 1366 aa18.5■□□□□ 0.55
Lime1-201ENSMUST00000048077 Fam184bQ0KK56 942 aa18.5■□□□□ 0.55
Lime1-201ENSMUST00000048077 Lemd3Q9WU40 921 aa18.5■□□□□ 0.55
Lime1-201ENSMUST00000048077 ErbinQ80TH2 1402 aa18.5■□□□□ 0.55
Lime1-201ENSMUST00000048077 Trpm1Q2TV84 1622 aa18.49■□□□□ 0.55
Lime1-201ENSMUST00000048077 Kif3bQ61771 747 aa18.49■□□□□ 0.55
Lime1-201ENSMUST00000048077 Depdc5P61460 1591 aa18.48■□□□□ 0.55
Lime1-201ENSMUST00000048077 Zbtb4Q5F293 982 aa18.48■□□□□ 0.55
Lime1-201ENSMUST00000048077 Prkrip1Q9CWV6 186 aaKnown RBP18.48■□□□□ 0.55
Lime1-201ENSMUST00000048077 Kdm5aQ3UXZ9 1690 aa18.47■□□□□ 0.55
Lime1-201ENSMUST00000048077 Slc4a1apE9PX68 744 aa18.47■□□□□ 0.55
Lime1-201ENSMUST00000048077 Ppp2r1aQ76MZ3 589 aa18.47■□□□□ 0.55
Lime1-201ENSMUST00000048077 Nphp4P59240 1425 aa18.47■□□□□ 0.55
Lime1-201ENSMUST00000048077 PtprtQ99M80 1454 aa18.46■□□□□ 0.55
Lime1-201ENSMUST00000048077 Erich6D3Z6S9 713 aa18.46■□□□□ 0.55
Lime1-201ENSMUST00000048077 Mbd3Q9Z2D8 285 aaKnown RBP18.45■□□□□ 0.54
Lime1-201ENSMUST00000048077 Adgrb3Q80ZF8 1522 aa18.45■□□□□ 0.54
Lime1-201ENSMUST00000048077 DnmbpQ6TXD4 1580 aa18.45■□□□□ 0.54
Lime1-201ENSMUST00000048077 Ehbp1l1Q99MS7 1716 aa18.45■□□□□ 0.54
Lime1-201ENSMUST00000048077 Col17a1Q07563 1470 aa18.44■□□□□ 0.54
Lime1-201ENSMUST00000048077 Myom2Q14BI5 1463 aa18.44■□□□□ 0.54
Lime1-201ENSMUST00000048077 Prex1Q69ZK0 1650 aa18.44■□□□□ 0.54
Lime1-201ENSMUST00000048077 Cdk5rap2Q8K389 1822 aa18.44■□□□□ 0.54
Lime1-201ENSMUST00000048077 NeflP08551 543 aa18.44■□□□□ 0.54
Lime1-201ENSMUST00000048077 Kdm2aP59997 1161 aa18.44■□□□□ 0.54
Lime1-201ENSMUST00000048077 Sall3Q62255 1320 aa18.44■□□□□ 0.54
Lime1-201ENSMUST00000048077 Efcab6Q6P1E8 1516 aa18.43■□□□□ 0.54
Lime1-201ENSMUST00000048077 Akap12Q9WTQ5 1684 aa18.43■□□□□ 0.54
Lime1-201ENSMUST00000048077 Gm20521D3Z5F7 333 aa18.42■□□□□ 0.54
Lime1-201ENSMUST00000048077 Myo3aQ8K3H5 1613 aa18.42■□□□□ 0.54
Lime1-201ENSMUST00000048077 Tecpr2Q3UH45 1423 aa18.42■□□□□ 0.54
Lime1-201ENSMUST00000048077 Gtf2e1Q9D0D5 440 aa18.42■□□□□ 0.54
Lime1-201ENSMUST00000048077 Atp10aO54827 1508 aa18.41■□□□□ 0.54
Lime1-201ENSMUST00000048077 Sipa1l1Q8C0T5 1782 aa18.41■□□□□ 0.54
Lime1-201ENSMUST00000048077 Uggt1Q6P5E4 1551 aa18.41■□□□□ 0.54
Lime1-201ENSMUST00000048077 Pak3Q61036 559 aa18.41■□□□□ 0.54
Lime1-201ENSMUST00000048077 Egfem1Q8C088 590 aa18.41■□□□□ 0.54
Lime1-201ENSMUST00000048077 AatkQ80YE4 1365 aa18.4■□□□□ 0.54
Lime1-201ENSMUST00000048077 Kif16bB1AVY7 1312 aa18.4■□□□□ 0.54
Lime1-201ENSMUST00000048077 OvosQ3UU35 1456 aa18.4■□□□□ 0.54
Lime1-201ENSMUST00000048077 Talpid3E9PV87 1520 aa18.39■□□□□ 0.53
Lime1-201ENSMUST00000048077 Gprasp1Q5U4C1 1347 aa18.39■□□□□ 0.53
Lime1-201ENSMUST00000048077 Kcnh8P59111 1102 aa18.39■□□□□ 0.53
Lime1-201ENSMUST00000048077 Prdm2A2A7B5 1709 aaKnown RBP18.38■□□□□ 0.53
Lime1-201ENSMUST00000048077 Srpk2O54781 681 aaKnown RBP18.38■□□□□ 0.53
Lime1-201ENSMUST00000048077 Esx1O88933 382 aa18.38■□□□□ 0.53
Lime1-201ENSMUST00000048077 Cdc42bpgQ80UW5 1551 aa18.36■□□□□ 0.53
Lime1-201ENSMUST00000048077 Ak9G3UYQ4 1894 aa18.36■□□□□ 0.53
Lime1-201ENSMUST00000048077 Usp40Q8BWR4 1235 aa18.36■□□□□ 0.53
Lime1-201ENSMUST00000048077 Os9Q8K2C7 672 aa18.36■□□□□ 0.53
Lime1-201ENSMUST00000048077 AglF8VPN4 1532 aa18.36■□□□□ 0.53
Lime1-201ENSMUST00000048077 Slc4a3P16283 1227 aa18.35■□□□□ 0.53
Lime1-201ENSMUST00000048077 Rad21Q61550 635 aaKnown RBP18.35■□□□□ 0.53
Lime1-201ENSMUST00000048077 Ifnlr1Q8CGK5 535 aa18.35■□□□□ 0.53
Lime1-201ENSMUST00000048077 Plekhh1Q80TI1 1356 aa18.35■□□□□ 0.53
Lime1-201ENSMUST00000048077 Zmym3Q9JLM4 1370 aa18.34■□□□□ 0.53
Lime1-201ENSMUST00000048077 Gli2Q0VGT2 1544 aa18.34■□□□□ 0.53
Lime1-201ENSMUST00000048077 Ino80Q6ZPV2 1559 aa18.34■□□□□ 0.53
Lime1-201ENSMUST00000048077 Myom1Q62234 1667 aaKnown RBP18.33■□□□□ 0.53
Lime1-201ENSMUST00000048077 KdrP35918 1367 aa18.33■□□□□ 0.52
Lime1-201ENSMUST00000048077 Ipo9Q91YE6 1041 aa18.33■□□□□ 0.52
Lime1-201ENSMUST00000048077 Stk24Q99KH8 431 aa18.33■□□□□ 0.52
Lime1-201ENSMUST00000048077 Kif7B7ZNG0 1348 aa18.33■□□□□ 0.52
Lime1-201ENSMUST00000048077 Plxnc1Q9QZC2 1574 aa18.32■□□□□ 0.52
Lime1-201ENSMUST00000048077 Arid3cA6PWV5 409 aa18.31■□□□□ 0.52
Lime1-201ENSMUST00000048077 Fan1Q69ZT1 1020 aa18.31■□□□□ 0.52
Lime1-201ENSMUST00000048077 Rwdd1Q9CQK7 243 aa18.29■□□□□ 0.52
Lime1-201ENSMUST00000048077 MaddQ80U28 1577 aa18.29■□□□□ 0.52
Lime1-201ENSMUST00000048077 CrbnQ8C7D2 445 aa18.28■□□□□ 0.52
Lime1-201ENSMUST00000048077 Eif2ak4Q9QZ05 1648 aa18.28■□□□□ 0.52
Lime1-201ENSMUST00000048077 Ift172Q6VH22 1749 aa18.28■□□□□ 0.52
Lime1-201ENSMUST00000048077 Usp19Q3UJD6 1360 aa18.28■□□□□ 0.52
Lime1-201ENSMUST00000048077 Skint5A7XUY5 1461 aa18.28■□□□□ 0.52
Lime1-201ENSMUST00000048077 Cfap65Q3V0B4 1847 aa18.27■□□□□ 0.52
Lime1-201ENSMUST00000048077 Adgrl3Q80TS3 1537 aa18.27■□□□□ 0.52
Lime1-201ENSMUST00000048077 Puf60Q3UEB3 564 aaKnown RBP18.27■□□□□ 0.52
Lime1-201ENSMUST00000048077 Kiaa0556Q8C753 1610 aa18.27■□□□□ 0.51
Lime1-201ENSMUST00000048077 PalldQ9ET54 1408 aa18.25■□□□□ 0.51
Lime1-201ENSMUST00000048077 Dcaf11Q91VU6 549 aa18.25■□□□□ 0.51
Lime1-201ENSMUST00000048077 Nlrp6Q91WS2 869 aa18.25■□□□□ 0.51
Lime1-201ENSMUST00000048077 InsrP15208 1372 aa18.25■□□□□ 0.51
Lime1-201ENSMUST00000048077 Adamts7Q68SA9 1657 aa18.24■□□□□ 0.51
Lime1-201ENSMUST00000048077 AdgbG3UZ78 1657 aa18.23■□□□□ 0.51
Lime1-201ENSMUST00000048077 Mroh1E0CZ22 1640 aa18.23■□□□□ 0.51
Lime1-201ENSMUST00000048077 Slc52a2Q9D8F3 450 aa18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms