RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Thoc2B1AZI6 1594 aaKnown RBP19.09■□□□□ 0.65
Usp38-201ENSMUST00000042724 Ncoa3O09000 1398 aa19.09■□□□□ 0.65
Usp38-201ENSMUST00000042724 Fyb1O35601 819 aa19.09■□□□□ 0.65
Usp38-201ENSMUST00000042724 Nol10Q5RJG1 687 aaKnown RBP19.09■□□□□ 0.65
Usp38-201ENSMUST00000042724 Pak3Q61036 559 aa19.09■□□□□ 0.65
Usp38-201ENSMUST00000042724 Samd9lQ69Z37 1561 aa19.09■□□□□ 0.65
Usp38-201ENSMUST00000042724 Ppp2r1aQ76MZ3 589 aa19.08■□□□□ 0.65
Usp38-201ENSMUST00000042724 Ccdc30Q8BVF4 654 aa19.08■□□□□ 0.64
Usp38-201ENSMUST00000042724 Ttc21bQ0HA38 1315 aa19.08■□□□□ 0.64
Usp38-201ENSMUST00000042724 Q7TT23 1179 aa19.07■□□□□ 0.64
Usp38-201ENSMUST00000042724 Slc52a2Q9D8F3 450 aa19.06■□□□□ 0.64
Usp38-201ENSMUST00000042724 PxdnQ3UQ28 1475 aa19.05■□□□□ 0.64
Usp38-201ENSMUST00000042724 Eif4g1Q6NZJ6 1600 aaKnown RBP19.05■□□□□ 0.64
Usp38-201ENSMUST00000042724 Mfap1aC0HKD8 439 aaKnown RBP19.05■□□□□ 0.64
Usp38-201ENSMUST00000042724 Mfap1bC0HKD9 439 aaKnown RBP19.05■□□□□ 0.64
Usp38-201ENSMUST00000042724 Sh3bp5Q9Z131 463 aa19.05■□□□□ 0.64
Usp38-201ENSMUST00000042724 Ythdc1E9Q5K9 736 aaKnown RBP19.04■□□□□ 0.64
Usp38-201ENSMUST00000042724 OvosQ3UU35 1456 aa19.04■□□□□ 0.64
Usp38-201ENSMUST00000042724 BC005561E9Q5E2 1589 aa19.04■□□□□ 0.64
Usp38-201ENSMUST00000042724 Trim58Q5NCC9 485 aa19.04■□□□□ 0.64
Usp38-201ENSMUST00000042724 WizO88286 1684 aaKnown RBP19.03■□□□□ 0.64
Usp38-201ENSMUST00000042724 Asxl1P59598 1514 aa19.03■□□□□ 0.64
Usp38-201ENSMUST00000042724 Cgnl1Q6AW69 1298 aa19.02■□□□□ 0.64
Usp38-201ENSMUST00000042724 AampJ3QN89 436 aa19.02■□□□□ 0.64
Usp38-201ENSMUST00000042724 3425401B19RikD3Z1D3 1412 aa19.01■□□□□ 0.63
Usp38-201ENSMUST00000042724 Swt1Q9DBQ9 907 aa19.01■□□□□ 0.63
Usp38-201ENSMUST00000042724 Gnai1B2RSH2 354 aa19.01■□□□□ 0.63
Usp38-201ENSMUST00000042724 Gnai3Q9DC51 354 aa19.01■□□□□ 0.63
Usp38-201ENSMUST00000042724 DroshaQ5HZJ0 1373 aaKnown RBP19■□□□□ 0.63
Usp38-201ENSMUST00000042724 Rassf8Q8CJ96 419 aa19■□□□□ 0.63
Usp38-201ENSMUST00000042724 Rapgef6Q5NCJ1 1609 aa19■□□□□ 0.63
Usp38-201ENSMUST00000042724 Shroom2A2ALU4 1481 aa18.99■□□□□ 0.63
Usp38-201ENSMUST00000042724 Kif16bB1AVY7 1312 aa18.99■□□□□ 0.63
Usp38-201ENSMUST00000042724 PtmsQ9D0J8 101 aaKnown RBP18.99■□□□□ 0.63
Usp38-201ENSMUST00000042724 Rprd2Q6NXI6 1469 aaKnown RBP18.99■□□□□ 0.63
Usp38-201ENSMUST00000042724 Gsdma3Q5Y4Y6 464 aa18.98■□□□□ 0.63
Usp38-201ENSMUST00000042724 Kif21aQ9QXL2 1672 aa18.98■□□□□ 0.63
Usp38-201ENSMUST00000042724 AI481877A2ALV5 1481 aa18.98■□□□□ 0.63
Usp38-201ENSMUST00000042724 Polr3aB2RXC6 1390 aa18.97■□□□□ 0.63
Usp38-201ENSMUST00000042724 Spryd3E9Q9B3 442 aa18.97■□□□□ 0.63
Usp38-201ENSMUST00000042724 Casc1Q6TDU8 730 aa18.97■□□□□ 0.63
Usp38-201ENSMUST00000042724 Cdk19Q8BWD8 501 aa18.96■□□□□ 0.63
Usp38-201ENSMUST00000042724 Chmp7Q8R1T1 451 aa18.96■□□□□ 0.63
Usp38-201ENSMUST00000042724 Plekhh1Q80TI1 1356 aa18.96■□□□□ 0.63
Usp38-201ENSMUST00000042724 Washc2Q6PGL7 1334 aa18.96■□□□□ 0.63
Usp38-201ENSMUST00000042724 Q8BT18 775 aa18.96■□□□□ 0.63
Usp38-201ENSMUST00000042724 Ythdc2B2RR83 1445 aaKnown RBP18.96■□□□□ 0.63
Usp38-201ENSMUST00000042724 TatQ8QZR1 454 aa18.96■□□□□ 0.63
Usp38-201ENSMUST00000042724 Naip5Q9R016 1403 aa18.96■□□□□ 0.62
Usp38-201ENSMUST00000042724 Ylpm1Q9R0I7 1386 aaKnown RBP18.95■□□□□ 0.62
Usp38-201ENSMUST00000042724 MecomP14404 1042 aa18.95■□□□□ 0.62
Usp38-201ENSMUST00000042724 Usp16Q99LG0 825 aa18.95■□□□□ 0.62
Usp38-201ENSMUST00000042724 Zfp444Q3TDV8 331 aaKnown RBP18.95■□□□□ 0.62
Usp38-201ENSMUST00000042724 Atf3Q60765 181 aa18.95■□□□□ 0.62
Usp38-201ENSMUST00000042724 GorabQ8BRM2 368 aa18.95■□□□□ 0.62
Usp38-201ENSMUST00000042724 Ccdc146E9Q9F7 977 aa18.94■□□□□ 0.62
Usp38-201ENSMUST00000042724 Chmp3Q9CQ10 224 aa18.94■□□□□ 0.62
Usp38-201ENSMUST00000042724 PrxO55103 1391 aa18.94■□□□□ 0.62
Usp38-201ENSMUST00000042724 Rbm25B2RY56 838 aaKnown RBP18.93■□□□□ 0.62
Usp38-201ENSMUST00000042724 Sall3Q62255 1320 aa18.93■□□□□ 0.62
Usp38-201ENSMUST00000042724 Pik3c2gO70167 1506 aa18.93■□□□□ 0.62
Usp38-201ENSMUST00000042724 Mapkbp1Q6NS57 1503 aa18.93■□□□□ 0.62
Usp38-201ENSMUST00000042724 Prkrip1Q9CWV6 186 aaKnown RBP18.92■□□□□ 0.62
Usp38-201ENSMUST00000042724 Cavin4A2AMM0 362 aa18.92■□□□□ 0.62
Usp38-201ENSMUST00000042724 Clstn1Q9EPL2 979 aa18.92■□□□□ 0.62
Usp38-201ENSMUST00000042724 Slc4a10Q5DTL9 1118 aa18.91■□□□□ 0.62
Usp38-201ENSMUST00000042724 Brpf1B2RRD7 1212 aa18.91■□□□□ 0.62
Usp38-201ENSMUST00000042724 PnnO35691 725 aaKnown RBP18.9■□□□□ 0.62
Usp38-201ENSMUST00000042724 Nup160Q9Z0W3 1402 aaKnown RBP18.89■□□□□ 0.62
Usp38-201ENSMUST00000042724 ChgaP26339 463 aaKnown RBP18.89■□□□□ 0.61
Usp38-201ENSMUST00000042724 Pip4k2bQ80XI4 416 aa18.88■□□□□ 0.61
Usp38-201ENSMUST00000042724 Ric3Q8BPM6 367 aa18.87■□□□□ 0.61
Usp38-201ENSMUST00000042724 HnrnpmQ9D0E1 729 aaKnown RBP18.87■□□□□ 0.61
Usp38-201ENSMUST00000042724 Pank1Q8K4K6 548 aa18.87■□□□□ 0.61
Usp38-201ENSMUST00000042724 Prex2Q3LAC4 1598 aa18.87■□□□□ 0.61
Usp38-201ENSMUST00000042724 Apaf1O88879 1249 aa18.86■□□□□ 0.61
Usp38-201ENSMUST00000042724 Gm156Q58A37 223 aa18.86■□□□□ 0.61
Usp38-201ENSMUST00000042724 GphnQ8BUV3 769 aaKnown RBP18.86■□□□□ 0.61
Usp38-201ENSMUST00000042724 Ccdc171E9Q1U1 1324 aa18.86■□□□□ 0.61
Usp38-201ENSMUST00000042724 Trappc8E9PWG2 1437 aa18.86■□□□□ 0.61
Usp38-201ENSMUST00000042724 Ncoa1P70365 1447 aa18.86■□□□□ 0.61
Usp38-201ENSMUST00000042724 Magi3Q9EQJ9 1476 aa18.86■□□□□ 0.61
Usp38-201ENSMUST00000042724 Iffo2Q8R2V2 512 aa18.85■□□□□ 0.61
Usp38-201ENSMUST00000042724 Erich3F6QRE9 1637 aa18.85■□□□□ 0.61
Usp38-201ENSMUST00000042724 Cc2d1aQ8K1A6 943 aa18.85■□□□□ 0.61
Usp38-201ENSMUST00000042724 HypkQ9CR41 129 aa18.85■□□□□ 0.61
Usp38-201ENSMUST00000042724 Triml2E9PW10 424 aa18.85■□□□□ 0.61
Usp38-201ENSMUST00000042724 IbtkQ6ZPR6 1352 aaKnown RBP18.84■□□□□ 0.61
Usp38-201ENSMUST00000042724 Smarce1O54941 411 aaKnown RBP18.84■□□□□ 0.61
Usp38-201ENSMUST00000042724 Smc4Q8CG47 1286 aa18.84■□□□□ 0.61
Usp38-201ENSMUST00000042724 Atl3Q91YH5 541 aa18.83■□□□□ 0.61
Usp38-201ENSMUST00000042724 Sirt1Q923E4 737 aa18.83■□□□□ 0.61
Usp38-201ENSMUST00000042724 Cald1E9QA15 768 aaKnown RBP18.82■□□□□ 0.6
Usp38-201ENSMUST00000042724 Atp7aQ64430 1491 aa18.82■□□□□ 0.6
Usp38-201ENSMUST00000042724 Evi5lH3BKQ3 813 aa18.82■□□□□ 0.6
Usp38-201ENSMUST00000042724 Gm10471E9Q1C7 252 aa18.81■□□□□ 0.6
Usp38-201ENSMUST00000042724 Abcc1O35379 1528 aa18.81■□□□□ 0.6
Usp38-201ENSMUST00000042724 Peg3Q3URU2 1571 aa18.81■□□□□ 0.6
Usp38-201ENSMUST00000042724 Tceal9Q9DD24 104 aa18.81■□□□□ 0.6
Usp38-201ENSMUST00000042724 Gimap6Q8K349 305 aa18.81■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms