RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 Neurl4Q5NCX5 1563 aa18.97■□□□□ 0.63
Clcnka-201ENSMUST00000042617 PtprgQ05909 1442 aa18.97■□□□□ 0.63
Clcnka-201ENSMUST00000042617 Cdk13Q69ZA1 1511 aaKnown RBP18.97■□□□□ 0.63
Clcnka-201ENSMUST00000042617 Ttc41Q692V3 1318 aa18.97■□□□□ 0.63
Clcnka-201ENSMUST00000042617 Fndc1E9Q043 1732 aa18.96■□□□□ 0.63
Clcnka-201ENSMUST00000042617 Dnai1Q8C0M8 701 aa18.96■□□□□ 0.63
Clcnka-201ENSMUST00000042617 Dnajc5gQ8C632 165 aa18.96■□□□□ 0.63
Clcnka-201ENSMUST00000042617 Cpsf1Q9EPU4 1441 aaKnown RBP18.96■□□□□ 0.63
Clcnka-201ENSMUST00000042617 Tubgcp6G5E8P0 1769 aa18.96■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Zmym3Q9JLM4 1370 aa18.95■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Asxl1P59598 1514 aa18.95■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Kdm5cP41230 1554 aa18.94■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Kcnn1Q9EQR3 537 aa18.94■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Kdm2bQ6P1G2 1309 aa18.94■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Cul9Q80TT8 1865 aa18.94■□□□□ 0.62
Clcnka-201ENSMUST00000042617 AdgbG3UZ78 1657 aa18.93■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Prdm16A2A935 1275 aa18.93■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Nos1Q9Z0J4 1429 aa18.92■□□□□ 0.62
Clcnka-201ENSMUST00000042617 NudcO35685 332 aaKnown RBP18.92■□□□□ 0.62
Clcnka-201ENSMUST00000042617 EspnQ9ET47 871 aa18.92■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Spag9Q58A65 1321 aaKnown RBP18.92■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Kiaa0556Q8C753 1610 aa18.91■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Zbtb4Q5F293 982 aa18.91■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Ppm1gQ61074 542 aa18.91■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Yeats2Q3TUF7 1407 aa18.91■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Dip2cE9PWR4 1557 aa18.91■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Cd109Q8R422 1442 aa18.91■□□□□ 0.62
Clcnka-201ENSMUST00000042617 Dot1lQ6XZL8 1540 aa18.91■□□□□ 0.62
Clcnka-201ENSMUST00000042617 B4galnt3Q6L8S8 986 aa18.89■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Setd1aE9PYH6 1716 aa18.89■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Abca17E9PX95 1733 aa18.88■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Usp54Q8BL06 1588 aaKnown RBP18.88■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Pdcl3Q8BVF2 240 aa18.88■□□□□ 0.61
Clcnka-201ENSMUST00000042617 RereQ80TZ9 1558 aa18.88■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Q7TT23 1179 aa18.88■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Iqgap1Q9JKF1 1657 aaKnown RBP18.87■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Polr3aB2RXC6 1390 aa18.87■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Atp10aO54827 1508 aa18.87■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Kif3bQ61771 747 aa18.86■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Atp7aQ64430 1491 aa18.86■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Rad21Q61550 635 aaKnown RBP18.85■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Rock1P70335 1354 aa18.85■□□□□ 0.61
Clcnka-201ENSMUST00000042617 ShprhQ7TPQ3 1674 aa18.85■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Arid4bA2CG63 1314 aaKnown RBP18.85■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Hecw2Q6I6G8 1578 aa18.83■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Plppr3Q7TPB0 716 aa18.83■□□□□ 0.61
Clcnka-201ENSMUST00000042617 Pde4cQ3UEI1 686 aa18.83■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Plch2A2AP18 1501 aa18.82■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Znf518aB2RRF6 1478 aaKnown RBP18.82■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Chmp5Q9D7S9 219 aa18.81■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Synj2Q9D2G5 1434 aa18.81■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Mroh3A0A1D5RM54 893 aa18.81■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Cfap65Q3V0B4 1847 aa18.8■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Qser1A2BIE1 1698 aa18.79■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Tex14Q7M6U3 1450 aa18.79■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Tarbp1E9Q368 1579 aa18.79■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Kif1bQ60575 1816 aaKnown RBP18.79■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Smc5Q8CG46 1101 aaKnown RBP18.79■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Tmc1Q8R4P5 757 aa18.78■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Gtf2a1Q99PM3 378 aa18.78■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Myo5cE9Q1F5 1742 aa18.78■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Dbr1Q923B1 550 aa18.78■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Rwdd1Q9CQK7 243 aa18.78■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Kif16bB1AVY7 1312 aa18.78■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Robo2Q7TPD3 1470 aa18.77■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Gli2Q0VGT2 1544 aa18.77■□□□□ 0.6
Clcnka-201ENSMUST00000042617 Mapk8ip3Q9ESN9 1337 aa18.76■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Cdc42bpgQ80UW5 1551 aa18.76■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Plekhh1Q80TI1 1356 aa18.75■□□□□ 0.59
Clcnka-201ENSMUST00000042617 AU015836B2RUM3 263 aa18.75■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Ppip5k1A2ARP1 1436 aa18.75■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Ipo8Q7TMY7 1010 aa18.72■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Topbp1Q6ZQF0 1515 aa18.72■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Nsd2Q8BVE8 1365 aa18.72■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Abca6Q8K441 1624 aa18.71■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Edc4Q3UJB9 1406 aaKnown RBP18.71■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Ppp1r9bQ6R891 817 aaKnown RBP18.71■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Eif2s2Q99L45 331 aaKnown RBP18.71■□□□□ 0.59
Clcnka-201ENSMUST00000042617 PrxO55103 1391 aa18.71■□□□□ 0.59
Clcnka-201ENSMUST00000042617 Ifit1bl1D3Z6F0 470 aa18.7■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Esx1O88933 382 aa18.7■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Htatsf1Q8BGC0 757 aa18.69■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Pank3Q8R2W9 370 aa18.69■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Ak7Q9D2H2 614 aa18.68■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Prex1Q69ZK0 1650 aa18.68■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Erich6D3Z6S9 713 aa18.68■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Trpm1Q2TV84 1622 aa18.67■□□□□ 0.58
Clcnka-201ENSMUST00000042617 CrbnQ8C7D2 445 aa18.66■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Hsp90ab1P11499 724 aaKnown RBP18.66■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Rrp9Q91WM3 475 aaKnown RBP18.66■□□□□ 0.58
Clcnka-201ENSMUST00000042617 4933402E13RikQ9D4D2 429 aa18.66■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Adamts13Q769J6 1426 aa18.66■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Zscan10Q3URR7 782 aa18.65■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Inpp5dQ9ES52 1191 aa18.65■□□□□ 0.58
Clcnka-201ENSMUST00000042617 NpatQ8BMA5 1420 aa18.64■□□□□ 0.58
Clcnka-201ENSMUST00000042617 Atf7ipQ7TT18 1306 aa18.64■□□□□ 0.57
Clcnka-201ENSMUST00000042617 Uggt2E9Q4X2 1504 aa18.63■□□□□ 0.57
Clcnka-201ENSMUST00000042617 Ylpm1Q9R0I7 1386 aaKnown RBP18.63■□□□□ 0.57
Clcnka-201ENSMUST00000042617 Trim30dE9PWL0 497 aa18.63■□□□□ 0.57
Clcnka-201ENSMUST00000042617 Afap1Q80YS6 731 aa18.63■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms