RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Ric3Q8BPM6 367 aa11.99□□□□□ -0.49
Syne1-201ENSMUST00000041639 WrnO09053 1401 aa11.99□□□□□ -0.49
Syne1-201ENSMUST00000041639 Map7d2A2AG50 781 aa11.99□□□□□ -0.49
Syne1-201ENSMUST00000041639 Tpm1P58771 284 aa11.99□□□□□ -0.49
Syne1-201ENSMUST00000041639 Znf710Q3U288 666 aa11.99□□□□□ -0.49
Syne1-201ENSMUST00000041639 Cplx2P84086 134 aa11.98□□□□□ -0.49
Syne1-201ENSMUST00000041639 Rsph4aQ8BYM7 716 aa11.98□□□□□ -0.49
Syne1-201ENSMUST00000041639 Ttll13A4Q9F6 804 aa11.98□□□□□ -0.49
Syne1-201ENSMUST00000041639 Nol12Q8BG17 217 aa11.98□□□□□ -0.49
Syne1-201ENSMUST00000041639 Smc4Q8CG47 1286 aa11.98□□□□□ -0.49
Syne1-201ENSMUST00000041639 Gm21190A0A0G2JGJ6 266 aa11.98□□□□□ -0.49
Syne1-201ENSMUST00000041639 Prkrip1Q9CWV6 186 aaKnown RBP11.98□□□□□ -0.49
Syne1-201ENSMUST00000041639 Sycp2Q9CUU3 1500 aa11.98□□□□□ -0.49
Syne1-201ENSMUST00000041639 FosbP13346 338 aa11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 Kri1Q8VDQ9 704 aaKnown RBP11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 Smc3Q9CW03 1217 aaKnown RBP11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 Tdrd9Q14BI7 1383 aa11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 Ccdc183A2AJB1 534 aa11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 PrkcshO08795 521 aa11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 Ftsj3Q9DBE9 838 aaKnown RBP11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 PogkQ80TC5 607 aa11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 Neurod6P48986 337 aa11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 Atl3Q91YH5 541 aa11.97□□□□□ -0.49
Syne1-201ENSMUST00000041639 Cplx1P63040 134 aa11.96□□□□□ -0.49
Syne1-201ENSMUST00000041639 Wdr78E9PYY5 807 aa11.96□□□□□ -0.49
Syne1-201ENSMUST00000041639 Taf3Q5HZG4 932 aa11.96□□□□□ -0.49
Syne1-201ENSMUST00000041639 Ddx11Q6AXC6 880 aa11.96□□□□□ -0.5
Syne1-201ENSMUST00000041639 Hmox1P14901 289 aa11.95□□□□□ -0.5
Syne1-201ENSMUST00000041639 Srek1Q8BZX4 494 aaKnown RBP11.95□□□□□ -0.5
Syne1-201ENSMUST00000041639 Mad1l1Q9WTX8 717 aaKnown RBP11.95□□□□□ -0.5
Syne1-201ENSMUST00000041639 Nek4Q9Z1J2 792 aa11.95□□□□□ -0.5
Syne1-201ENSMUST00000041639 Dixdc1Q80Y83 711 aa11.95□□□□□ -0.5
Syne1-201ENSMUST00000041639 Fam193aQ8CGI1 1231 aaKnown RBP11.95□□□□□ -0.5
Syne1-201ENSMUST00000041639 Rnf20Q5DTM8 973 aa11.95□□□□□ -0.5
Syne1-201ENSMUST00000041639 Rnf214Q8BFU3 668 aaKnown RBP11.95□□□□□ -0.5
Syne1-201ENSMUST00000041639 LrpprcQ6PB66 1392 aaKnown RBP11.94□□□□□ -0.5
Syne1-201ENSMUST00000041639 Cc2d2bA0A286YDU8 1405 aa11.94□□□□□ -0.5
Syne1-201ENSMUST00000041639 Rbm25B2RY56 838 aaKnown RBP11.94□□□□□ -0.5
Syne1-201ENSMUST00000041639 Rec8Q8C5S7 591 aa11.94□□□□□ -0.5
Syne1-201ENSMUST00000041639 Stk11ipQ3TAA7 1072 aa11.94□□□□□ -0.5
Syne1-201ENSMUST00000041639 Q7TT23 1179 aa11.94□□□□□ -0.5
Syne1-201ENSMUST00000041639 Tpm2P58774 284 aa11.94□□□□□ -0.5
Syne1-201ENSMUST00000041639 Tpm4Q6IRU2 248 aa11.94□□□□□ -0.5
Syne1-201ENSMUST00000041639 Chmp7Q8R1T1 451 aa11.93□□□□□ -0.5
Syne1-201ENSMUST00000041639 Evc2Q8K1G2 1220 aa11.93□□□□□ -0.5
Syne1-201ENSMUST00000041639 Plcd4Q8K3R3 807 aa11.93□□□□□ -0.5
Syne1-201ENSMUST00000041639 Gnai1B2RSH2 354 aa11.93□□□□□ -0.5
Syne1-201ENSMUST00000041639 Hnrnpul1Q8VDM6 859 aaKnown RBP11.93□□□□□ -0.5
Syne1-201ENSMUST00000041639 Gnai3Q9DC51 354 aa11.93□□□□□ -0.5
Syne1-201ENSMUST00000041639 AampJ3QN89 436 aa11.93□□□□□ -0.5
Syne1-201ENSMUST00000041639 Q8C5K5 320 aa11.93□□□□□ -0.5
Syne1-201ENSMUST00000041639 Cfdp1O88271 295 aaKnown RBP11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 Usp48Q3V0C5 1052 aa11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 Swt1Q9DBQ9 907 aa11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 Rab11fip3Q8CHD8 1047 aa11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 Ipo4Q8VI75 1082 aa11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 ErbinQ80TH2 1402 aa11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 Zfp644E9QA22 1323 aa11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 A0A0U1RNP2 1173 aa11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 Phldb1Q6PDH0 1371 aaKnown RBP11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 Ipo7Q9EPL8 1038 aaKnown RBP11.92□□□□□ -0.5
Syne1-201ENSMUST00000041639 Dhx16G3X8X0 1044 aaKnown RBP11.91□□□□□ -0.5
Syne1-201ENSMUST00000041639 Smarca2Q6DIC0 1577 aa11.91□□□□□ -0.5
Syne1-201ENSMUST00000041639 Slc4a2P13808 1237 aaKnown RBP11.91□□□□□ -0.5
Syne1-201ENSMUST00000041639 Gsto1O09131 240 aa11.91□□□□□ -0.5
Syne1-201ENSMUST00000041639 Cetn4Q8K4K1 168 aa11.91□□□□□ -0.5
Syne1-201ENSMUST00000041639 Tnpo1Q8BFY9 898 aaKnown RBP11.9□□□□□ -0.5
Syne1-201ENSMUST00000041639 Pknox2Q8BG99 474 aa11.9□□□□□ -0.5
Syne1-201ENSMUST00000041639 Ankrd36D3Z4K0 1415 aa11.9□□□□□ -0.5
Syne1-201ENSMUST00000041639 Plekhh1Q80TI1 1356 aa11.9□□□□□ -0.5
Syne1-201ENSMUST00000041639 Bcl2l13P59017 434 aa11.9□□□□□ -0.51
Syne1-201ENSMUST00000041639 Sv2bQ8BG39 683 aa11.9□□□□□ -0.51
Syne1-201ENSMUST00000041639 Ciz1Q8VEH2 845 aa11.9□□□□□ -0.51
Syne1-201ENSMUST00000041639 PhaxQ9JJT9 385 aaKnown RBP11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 Crybg2B7ZCC2 1516 aa11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 CrcpO35427 148 aa11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 Erc2Q6PH08 957 aa11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 Ccp110Q7TSH4 1004 aa11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 Gpatch3Q8BIY1 525 aa11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 Stk3Q9JI10 497 aa11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 Ccdc34Q3UI66 367 aa11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 SkilQ60665 675 aa11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 Hook1Q8BIL5 728 aa11.89□□□□□ -0.51
Syne1-201ENSMUST00000041639 Gprasp1Q5U4C1 1347 aa11.88□□□□□ -0.51
Syne1-201ENSMUST00000041639 PnisrA2AJT4 805 aaKnown RBP11.88□□□□□ -0.51
Syne1-201ENSMUST00000041639 Cyp46a1Q9WVK8 500 aa11.88□□□□□ -0.51
Syne1-201ENSMUST00000041639 A0A1L1SQF0 893 aa11.88□□□□□ -0.51
Syne1-201ENSMUST00000041639 Zfp444Q3TDV8 331 aaKnown RBP11.88□□□□□ -0.51
Syne1-201ENSMUST00000041639 Ppp2r3aB2RXC8 1150 aa11.88□□□□□ -0.51
Syne1-201ENSMUST00000041639 Noc3lQ8VI84 807 aaKnown RBP11.88□□□□□ -0.51
Syne1-201ENSMUST00000041639 Hmgn5Q9JL35 406 aa11.88□□□□□ -0.51
Syne1-201ENSMUST00000041639 Dhx29Q6PGC1 1365 aaKnown RBP11.88□□□□□ -0.51
Syne1-201ENSMUST00000041639 Apaf1O88879 1249 aa11.87□□□□□ -0.51
Syne1-201ENSMUST00000041639 Puf60Q3UEB3 564 aaKnown RBP11.87□□□□□ -0.51
Syne1-201ENSMUST00000041639 Pnmal2G3X9N3 661 aa11.87□□□□□ -0.51
Syne1-201ENSMUST00000041639 Fyb1O35601 819 aa11.87□□□□□ -0.51
Syne1-201ENSMUST00000041639 BcanQ61361 883 aa11.87□□□□□ -0.51
Syne1-201ENSMUST00000041639 Babam1Q3UI43 333 aa11.86□□□□□ -0.51
Syne1-201ENSMUST00000041639 Ccdc173A0JLY1 547 aa11.86□□□□□ -0.51
Syne1-201ENSMUST00000041639 Kcnh8P59111 1102 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 93.7 ms