RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Rrp9Q91WM3 475 aaKnown RBP14.2□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Ncoa3O09000 1398 aa14.2□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Ccdc146E9Q9F7 977 aa14.2□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Phf14Q9D4H9 881 aa14.2□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Chmp4cQ9D7F7 232 aa14.2□□□□□ -0.14
Topbp1-201ENSMUST00000035164 U2surpQ6NV83 1029 aaKnown RBP14.19□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Rbm10Q99KG3 930 aaKnown RBP14.19□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Sall3Q62255 1320 aa14.19□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Arhgap31A6X8Z5 1425 aa14.19□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Cd109Q8R422 1442 aa14.19□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Spag9Q58A65 1321 aaKnown RBP14.18□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Pde4cQ3UEI1 686 aa14.18□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Cog6Q8R3I3 657 aa14.18□□□□□ -0.14
Topbp1-201ENSMUST00000035164 SynmQ70IV5 1561 aa14.18□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Rfx7F8VPJ6 1459 aa14.18□□□□□ -0.14
Topbp1-201ENSMUST00000035164 IqubQ8CDK3 788 aa14.18□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Naip6Q9JIB6 1403 aa14.17□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Rsph3aQ3UFY4 516 aa14.17□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Lmo7E9PYF4 1699 aaKnown RBP14.17□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Catsper2A2ARP9 588 aa14.17□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Cdk13Q69ZA1 1511 aaKnown RBP14.17□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Pnmal2G3X9N3 661 aa14.16□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Irx6Q9ER75 438 aa14.16□□□□□ -0.14
Topbp1-201ENSMUST00000035164 4933402E13RikQ9D4D2 429 aa14.16□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Pprc1Q6NZN1 1644 aa14.16□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Rlbp1Q9Z275 317 aa14.16□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Adgrb2Q8CGM1 1561 aa14.16□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Duxf3A0A0N4SV92 674 aa14.16□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Q4VA45 678 aa14.15□□□□□ -0.14
Topbp1-201ENSMUST00000035164 AampJ3QN89 436 aa14.15□□□□□ -0.14
Topbp1-201ENSMUST00000035164 DmtnQ9WV69 405 aa14.15□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Wdr7Q920I9 1489 aa14.15□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Aplp1Q03157 653 aa14.15□□□□□ -0.14
Topbp1-201ENSMUST00000035164 Polr3aB2RXC6 1390 aa14.14□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Samd9lQ69Z37 1561 aa14.14□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Il4rP16382 810 aa14.14□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Ddrgk1Q80WW9 315 aa14.14□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Tfip11Q9ERA6 838 aaKnown RBP14.13□□□□□ -0.15
Topbp1-201ENSMUST00000035164 VgfQ0VGU4 617 aa14.13□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Map3k5O35099 1380 aa14.13□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Arid3cA6PWV5 409 aa14.13□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Pibf1E9Q6K3 756 aa14.13□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Kif18aQ91WD7 886 aa14.13□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Atl3Q91YH5 541 aa14.13□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Arhgef40Q3UPH7 1517 aa14.13□□□□□ -0.15
Topbp1-201ENSMUST00000035164 G3bp1P97855 465 aaKnown RBP14.12□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Rnf214Q8BFU3 668 aaKnown RBP14.12□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Nek4Q9Z1J2 792 aa14.12□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Zmym4A2A791 1549 aaKnown RBP14.12□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Birc3O08863 600 aa14.11□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Jph4Q80WT0 628 aa14.09□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Dusp27Q148W8 1138 aa14.09□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Asxl1P59598 1514 aa14.09□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Lmtk2Q3TYD6 1471 aa14.09□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Pdia4P08003 638 aaKnown RBP14.09□□□□□ -0.15
Topbp1-201ENSMUST00000035164 TnikP83510 1323 aa14.09□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Mink1Q9JM52 1308 aa14.09□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Ppp1r3fQ9JIG4 799 aa14.08□□□□□ -0.15
Topbp1-201ENSMUST00000035164 RalgapbQ8BQZ4 1484 aa14.08□□□□□ -0.15
Topbp1-201ENSMUST00000035164 Znf316Q6PGE4 1016 aa14.08□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Zfp777B9EKF4 885 aa14.07□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Cc2d1aQ8K1A6 943 aa14.07□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Pcmtd1P59913 357 aa14.07□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Terf2O35144 541 aa14.07□□□□□ -0.16
Topbp1-201ENSMUST00000035164 SkilQ60665 675 aa14.07□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Fam163aQ8CAA5 168 aa14.06□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Gpatch11Q3UFS4 262 aa14.06□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Uspl1Q3ULM6 1089 aa14.06□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Maco1Q7TQE6 664 aaKnown RBP14.06□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Casq1O09165 405 aa14.06□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Hsp90b1P08113 802 aaKnown RBP14.06□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Ush1cQ9ES64 910 aa14.05□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Rbm25B2RY56 838 aaKnown RBP14.05□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Nol12Q8BG17 217 aa14.05□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Puf60Q3UEB3 564 aaKnown RBP14.04□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Casc1Q6TDU8 730 aa14.04□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Kcnn1Q9EQR3 537 aa14.04□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Tbc1d32Q3URV1 1296 aa14.03□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Triml2E9PW10 424 aa14.02□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Tnnt2P50752 301 aa14.02□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Becn1O88597 448 aa14.02□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Kif20aP97329 887 aa14.02□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Plb1Q3TTY0 1478 aa14.02□□□□□ -0.16
Topbp1-201ENSMUST00000035164 Peg3Q3URU2 1571 aa14.01□□□□□ -0.17
Topbp1-201ENSMUST00000035164 PogkQ80TC5 607 aa14.01□□□□□ -0.17
Topbp1-201ENSMUST00000035164 AU019823E9PUQ3 292 aa14.01□□□□□ -0.17
Topbp1-201ENSMUST00000035164 PxdnQ3UQ28 1475 aa14□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Zranb1Q7M760 708 aa14□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Samd1D3YXK1 519 aa14□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Fbxo2Q80UW2 297 aa14□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Nsfl1cQ9CZ44 370 aaKnown RBP14□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Grin2aP35436 1464 aa14□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Cald1E9QA15 768 aaKnown RBP13.99□□□□□ -0.17
Topbp1-201ENSMUST00000035164 MsnP26041 577 aaKnown RBP13.99□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Atp7aQ64430 1491 aa13.98□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Dmrtc1Q9D9R7 182 aa13.98□□□□□ -0.17
Topbp1-201ENSMUST00000035164 AlkP97793 1621 aa13.98□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Pla2r1Q62028 1487 aa13.98□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Phactr2B1AVP0 632 aa13.98□□□□□ -0.17
Topbp1-201ENSMUST00000035164 Tmc1Q8R4P5 757 aa13.98□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms