RNA–Protein interactions for RNA: ENSMUST00000028752.7

Vps39-201, Transcript of Vam6/Vps39-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps39, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-201ENSMUST00000028752 Gtf3c5Q8R2T8 520 aa11.53□□□□□ -0.56
Vps39-201ENSMUST00000028752 Shroom4Q1W617 1475 aa11.53□□□□□ -0.56
Vps39-201ENSMUST00000028752 SkilQ60665 675 aa11.53□□□□□ -0.56
Vps39-201ENSMUST00000028752 Chmp4cQ9D7F7 232 aa11.52□□□□□ -0.56
Vps39-201ENSMUST00000028752 PnnO35691 725 aaKnown RBP11.52□□□□□ -0.57
Vps39-201ENSMUST00000028752 Pnmal2G3X9N3 661 aa11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 EzrP26040 586 aaKnown RBP11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 Cog6Q8R3I3 657 aa11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 Phactr2B1AVP0 632 aa11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 1700010I14RikQ7TPG0 532 aa11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 Iffo2Q8R2V2 512 aa11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 Fan1Q69ZT1 1020 aa11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 Dixdc1Q80Y83 711 aa11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 Cetn4Q8K4K1 168 aa11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 Cux2P70298 1426 aa11.51□□□□□ -0.57
Vps39-201ENSMUST00000028752 Zkscan1Q8BGS3 561 aaKnown RBP11.5□□□□□ -0.57
Vps39-201ENSMUST00000028752 Smarca4Q3TKT4 1613 aaKnown RBP11.5□□□□□ -0.57
Vps39-201ENSMUST00000028752 Rab3gap2Q8BMG7 1366 aa11.5□□□□□ -0.57
Vps39-201ENSMUST00000028752 Gse1Q3U3C9 1213 aa11.5□□□□□ -0.57
Vps39-201ENSMUST00000028752 NcapgE9PWG6 1004 aa11.5□□□□□ -0.57
Vps39-201ENSMUST00000028752 Polr3gQ6NXY9 223 aa11.5□□□□□ -0.57
Vps39-201ENSMUST00000028752 Nutm1Q8BHP2 1126 aa11.5□□□□□ -0.57
Vps39-201ENSMUST00000028752 Cbx1P83917 185 aaKnown RBP11.49□□□□□ -0.57
Vps39-201ENSMUST00000028752 Kif18aQ91WD7 886 aa11.49□□□□□ -0.57
Vps39-201ENSMUST00000028752 Vgll3P85442 326 aa11.49□□□□□ -0.57
Vps39-201ENSMUST00000028752 Nol12Q8BG17 217 aa11.49□□□□□ -0.57
Vps39-201ENSMUST00000028752 Dhx9O70133 1380 aaKnown RBP11.49□□□□□ -0.57
Vps39-201ENSMUST00000028752 PtprkP35822 1457 aa11.49□□□□□ -0.57
Vps39-201ENSMUST00000028752 Naip2Q9QUK4 1447 aa11.49□□□□□ -0.57
Vps39-201ENSMUST00000028752 Top2bQ64511 1612 aa11.48□□□□□ -0.57
Vps39-201ENSMUST00000028752 Olfml1Q8BSH2 233 aa11.48□□□□□ -0.57
Vps39-201ENSMUST00000028752 R3hcc1Q8BSI6 488 aa11.48□□□□□ -0.57
Vps39-201ENSMUST00000028752 Q9D2X8 372 aa11.48□□□□□ -0.57
Vps39-201ENSMUST00000028752 Sh3bgrQ9WUZ7 214 aa11.48□□□□□ -0.57
Vps39-201ENSMUST00000028752 Ubap1lG3UW59 384 aa11.47□□□□□ -0.57
Vps39-201ENSMUST00000028752 Birc3O08863 600 aa11.47□□□□□ -0.57
Vps39-201ENSMUST00000028752 Tex2Q6ZPJ0 1128 aaKnown RBP11.47□□□□□ -0.57
Vps39-201ENSMUST00000028752 Stk26Q99JT2 416 aa11.47□□□□□ -0.57
Vps39-201ENSMUST00000028752 Nectin2P32507 530 aa11.47□□□□□ -0.57
Vps39-201ENSMUST00000028752 Sh3bp5Q9Z131 463 aa11.47□□□□□ -0.57
Vps39-201ENSMUST00000028752 Map3k1P53349 1493 aa11.46□□□□□ -0.57
Vps39-201ENSMUST00000028752 Triml2E9PW10 424 aa11.46□□□□□ -0.57
Vps39-201ENSMUST00000028752 Nap1l3Q794H2 544 aa11.46□□□□□ -0.57
Vps39-201ENSMUST00000028752 Pibf1E9Q6K3 756 aa11.46□□□□□ -0.58
Vps39-201ENSMUST00000028752 Tfip11Q9ERA6 838 aaKnown RBP11.46□□□□□ -0.58
Vps39-201ENSMUST00000028752 Ncoa2Q61026 1462 aa11.46□□□□□ -0.58
Vps39-201ENSMUST00000028752 Rassf8Q8CJ96 419 aa11.46□□□□□ -0.58
Vps39-201ENSMUST00000028752 Tmc1Q8R4P5 757 aa11.45□□□□□ -0.58
Vps39-201ENSMUST00000028752 Mrvi1Q9WUX5 899 aaKnown RBP11.45□□□□□ -0.58
Vps39-201ENSMUST00000028752 Myom3A2ABU4 1439 aa11.45□□□□□ -0.58
Vps39-201ENSMUST00000028752 Terf2O35144 541 aa11.45□□□□□ -0.58
Vps39-201ENSMUST00000028752 KinQ8K339 391 aa11.45□□□□□ -0.58
Vps39-201ENSMUST00000028752 Syce3B5KM66 88 aa11.45□□□□□ -0.58
Vps39-201ENSMUST00000028752 MecomP14404 1042 aa11.45□□□□□ -0.58
Vps39-201ENSMUST00000028752 Usp40Q8BWR4 1235 aa11.45□□□□□ -0.58
Vps39-201ENSMUST00000028752 Camsap2Q8C1B1 1461 aa11.44□□□□□ -0.58
Vps39-201ENSMUST00000028752 Brpf1B2RRD7 1212 aa11.44□□□□□ -0.58
Vps39-201ENSMUST00000028752 Il4rP16382 810 aa11.44□□□□□ -0.58
Vps39-201ENSMUST00000028752 Cdkn1cP49919 348 aa11.44□□□□□ -0.58
Vps39-201ENSMUST00000028752 Anp32eP97822 260 aaKnown RBP11.44□□□□□ -0.58
Vps39-201ENSMUST00000028752 Pdcl2Q78Y63 240 aa11.43□□□□□ -0.58
Vps39-201ENSMUST00000028752 Cc2d1aQ8K1A6 943 aa11.43□□□□□ -0.58
Vps39-201ENSMUST00000028752 AqrQ8CFQ3 1481 aaKnown RBP11.43□□□□□ -0.58
Vps39-201ENSMUST00000028752 Tpm3P21107 285 aaKnown RBP11.43□□□□□ -0.58
Vps39-201ENSMUST00000028752 Ttll5Q8CHB8 1328 aa11.43□□□□□ -0.58
Vps39-201ENSMUST00000028752 Apaf1O88879 1249 aa11.43□□□□□ -0.58
Vps39-201ENSMUST00000028752 Pde3bQ61409 1100 aa11.43□□□□□ -0.58
Vps39-201ENSMUST00000028752 Dhx57Q6P5D3 1388 aaKnown RBP11.43□□□□□ -0.58
Vps39-201ENSMUST00000028752 PrxO55103 1391 aa11.42□□□□□ -0.58
Vps39-201ENSMUST00000028752 Rtf1A2AQ19 715 aaKnown RBP11.42□□□□□ -0.58
Vps39-201ENSMUST00000028752 Catsper2A2ARP9 588 aa11.42□□□□□ -0.58
Vps39-201ENSMUST00000028752 Soga1E1U8D0 1418 aa11.42□□□□□ -0.58
Vps39-201ENSMUST00000028752 Pds5bQ4VA53 1446 aaKnown RBP11.42□□□□□ -0.58
Vps39-201ENSMUST00000028752 Rbm25B2RY56 838 aaKnown RBP11.42□□□□□ -0.58
Vps39-201ENSMUST00000028752 Q3TQI7 289 aaKnown RBP11.42□□□□□ -0.58
Vps39-201ENSMUST00000028752 Gm7298A0A0N4SVU1 1476 aa11.42□□□□□ -0.58
Vps39-201ENSMUST00000028752 Rcan3Q9JKK0 239 aa11.41□□□□□ -0.58
Vps39-201ENSMUST00000028752 Sart1Q9Z315 806 aaKnown RBP11.41□□□□□ -0.58
Vps39-201ENSMUST00000028752 Zhx1P70121 873 aa11.41□□□□□ -0.58
Vps39-201ENSMUST00000028752 Hmgn5Q9JL35 406 aa11.41□□□□□ -0.58
Vps39-201ENSMUST00000028752 EprsQ8CGC7 1512 aaKnown RBP11.41□□□□□ -0.58
Vps39-201ENSMUST00000028752 Smc3Q9CW03 1217 aaKnown RBP11.41□□□□□ -0.58
Vps39-201ENSMUST00000028752 Tdrd9Q14BI7 1383 aa11.4□□□□□ -0.58
Vps39-201ENSMUST00000028752 SetQ9EQU5 289 aaKnown RBP11.4□□□□□ -0.58
Vps39-201ENSMUST00000028752 LrpprcQ6PB66 1392 aaKnown RBP11.4□□□□□ -0.58
Vps39-201ENSMUST00000028752 Tbc1d32Q3URV1 1296 aa11.4□□□□□ -0.58
Vps39-201ENSMUST00000028752 A2mQ6GQT1 1474 aa11.4□□□□□ -0.58
Vps39-201ENSMUST00000028752 NrkQ9R0G8 1455 aa11.4□□□□□ -0.58
Vps39-201ENSMUST00000028752 Bicd2Q921C5 820 aa11.4□□□□□ -0.58
Vps39-201ENSMUST00000028752 Ccer1Q9CQL2 403 aa11.39□□□□□ -0.59
Vps39-201ENSMUST00000028752 Mad1l1Q9WTX8 717 aaKnown RBP11.39□□□□□ -0.59
Vps39-201ENSMUST00000028752 ImpactO55091 318 aa11.39□□□□□ -0.59
Vps39-201ENSMUST00000028752 Znf771Q8BJ90 317 aa11.39□□□□□ -0.59
Vps39-201ENSMUST00000028752 Mroh2bQ7M6Y6 1581 aa11.39□□□□□ -0.59
Vps39-201ENSMUST00000028752 CastP51125 788 aa11.39□□□□□ -0.59
Vps39-201ENSMUST00000028752 Clcn1Q64347 994 aa11.39□□□□□ -0.59
Vps39-201ENSMUST00000028752 Gprasp1Q5U4C1 1347 aa11.38□□□□□ -0.59
Vps39-201ENSMUST00000028752 Fmnl2A2APV2 1086 aa11.38□□□□□ -0.59
Vps39-201ENSMUST00000028752 Bag4Q8CI61 457 aa11.38□□□□□ -0.59
Vps39-201ENSMUST00000028752 Frmd3Q8BHD4 595 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms