RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Drc7Q6V3W6 876 aa17.42■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Arid4aF8VPQ2 1261 aaKnown RBP17.41■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Cep112Q5PR68 954 aa17.41■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Cep162Q6ZQ06 1403 aa17.41■□□□□ 0.38
Col7a1-201ENSMUST00000026740 AppP12023 770 aa17.4■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Znf330Q922H9 316 aa17.4■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Kdm5dQ62240 1548 aa17.4■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Trak1Q6PD31 939 aa17.4■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Rpap1Q80TE0 1409 aa17.39■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Mphosph9A6H5Y1 991 aa17.39■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Pnmal2G3X9N3 661 aa17.39■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Kiaa0753Q6A000 959 aa17.39■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Smg6P61406 1418 aaKnown RBP17.38■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Fam193aQ8CGI1 1231 aaKnown RBP17.38■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Psma5Q9Z2U1 241 aaKnown RBP17.38■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Ccp110Q7TSH4 1004 aa17.37■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Rabep1O35551 862 aa17.37■□□□□ 0.37
Col7a1-201ENSMUST00000026740 TxlnbQ8VBT1 685 aa17.37■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Atl3Q91YH5 541 aa17.37■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Gnl3lQ6PGG6 577 aaKnown RBP17.36■□□□□ 0.37
Col7a1-201ENSMUST00000026740 PdcQ9QW08 244 aa17.36■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Sycp1Q62209 993 aa17.36■□□□□ 0.37
Col7a1-201ENSMUST00000026740 NexnQ7TPW1 607 aa17.36■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Dixdc1Q80Y83 711 aa17.36■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Cetn4Q8K4K1 168 aa17.36■□□□□ 0.37
Col7a1-201ENSMUST00000026740 CrcpO35427 148 aa17.35■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Dhx16G3X8X0 1044 aaKnown RBP17.35■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Cdkn1cP49919 348 aa17.35■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Smc3Q9CW03 1217 aaKnown RBP17.35■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Nap1l1P28656 391 aaKnown RBP17.34■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Ncoa2Q61026 1462 aa17.34■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Gsdma3Q5Y4Y6 464 aa17.34■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Chmp7Q8R1T1 451 aa17.34■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Def6Q8C2K1 630 aa17.34■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Tsen2Q6P7W5 460 aa17.33■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Lrrc45Q8CIM1 670 aa17.33■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Pdcl3Q8BVF2 240 aa17.33■□□□□ 0.37
Col7a1-201ENSMUST00000026740 Ccnb3Q810T2 1396 aa17.33■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Ccdc146E9Q9F7 977 aa17.33■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Pak3Q61036 559 aa17.33■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Taok2Q6ZQ29 1240 aa17.33■□□□□ 0.36
Col7a1-201ENSMUST00000026740 CrbnQ8C7D2 445 aa17.33■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Cfap99A0A140LIX9 648 aa17.32■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Tubb6Q922F4 447 aa17.32■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Phldb2Q8K1N2 1249 aa17.31■□□□□ 0.36
Col7a1-201ENSMUST00000026740 SafbD3YXK2 937 aaKnown RBP17.31■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Sox12Q04890 314 aa17.3■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Ercc6lQ8BHK9 1240 aa17.3■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Aebp1Q640N1 1128 aa17.29■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Ak7Q9D2H2 614 aa17.29■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Trim58Q5NCC9 485 aa17.29■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Ccdc60Q8C4J0 545 aa17.29■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Mcm2P97310 904 aa17.28■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Stim1P70302 685 aa17.28■□□□□ 0.36
Col7a1-201ENSMUST00000026740 Cux2P70298 1426 aa17.27■□□□□ 0.36
Col7a1-201ENSMUST00000026740 OptnQ8K3K8 584 aa17.27■□□□□ 0.36
Col7a1-201ENSMUST00000026740 G3bp1P97855 465 aaKnown RBP17.27■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Ankrd36D3Z4K0 1415 aa17.26■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Map9Q3TRR0 646 aa17.26■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Ccdc96Q9CR92 584 aa17.26■□□□□ 0.35
Col7a1-201ENSMUST00000026740 GsdmaQ9EST1 446 aa17.26■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Usp47Q8BY87 1376 aa17.25■□□□□ 0.35
Col7a1-201ENSMUST00000026740 AnlnQ8K298 1121 aaKnown RBP17.25■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Nat10Q8K224 1024 aaKnown RBP17.24■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Commd10Q8JZY2 202 aa17.24■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Fez1Q8K0X8 392 aa17.24■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Cabp4Q8VHC5 271 aa17.24■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Me1P06801 572 aa17.24■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Nop14Q8R3N1 860 aaKnown RBP17.24■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Prl7d1P04769 244 aa17.24■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Smarca2Q6DIC0 1577 aa17.24■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Ints3Q7TPD0 1041 aaKnown RBP17.23■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Pibf1E9Q6K3 756 aa17.23■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Kif20aP97329 887 aa17.23■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Tmco3Q8BH01 678 aa17.22■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Eif2s2Q99L45 331 aaKnown RBP17.22■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Ccdc171E9Q1U1 1324 aa17.22■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Trim55G3X8Y1 545 aa17.22■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Gbp4Q61107 620 aa17.22■□□□□ 0.35
Col7a1-201ENSMUST00000026740 Plekhh1Q80TI1 1356 aa17.21■□□□□ 0.35
Col7a1-201ENSMUST00000026740 FanciQ8K368 1330 aa17.21■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Rrp9Q91WM3 475 aaKnown RBP17.2■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Cep89Q9CZX2 791 aa17.2■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Rbm25B2RY56 838 aaKnown RBP17.2■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Pknox2Q8BG99 474 aa17.2■□□□□ 0.34
Col7a1-201ENSMUST00000026740 SelenooQ9DBC0 667 aa17.2■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Hmgb2P30681 210 aaKnown RBP17.2■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Ppm1fQ8CGA0 452 aa17.2■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Gnai1B2RSH2 354 aa17.19■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Utp14aQ640M1 767 aaKnown RBP17.19■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Gnai3Q9DC51 354 aa17.19■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Nap1l2P51860 460 aa17.19■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Hnrnpul1Q8VDM6 859 aaKnown RBP17.19■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Eif3aP23116 1344 aaKnown RBP17.19■□□□□ 0.34
Col7a1-201ENSMUST00000026740 PnisrA2AJT4 805 aaKnown RBP17.19■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Spata24Q6P926 205 aa17.19■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Mrvi1Q9WUX5 899 aaKnown RBP17.19■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Znf771Q8BJ90 317 aa17.18■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Kif3bQ61771 747 aa17.18■□□□□ 0.34
Col7a1-201ENSMUST00000026740 Q8C5K5 320 aa17.17■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 61.4 ms