RNA–Protein interactions for RNA: ENSMUST00000021761.12

Trim27-201, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim27, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-201ENSMUST00000021761 Rabep1O35551 862 aa17.39■□□□□ 0.37
Trim27-201ENSMUST00000021761 Txndc2Q6P902 515 aa17.39■□□□□ 0.37
Trim27-201ENSMUST00000021761 Wdr62Q3U3T8 1523 aa17.39■□□□□ 0.37
Trim27-201ENSMUST00000021761 Rprd2Q6NXI6 1469 aaKnown RBP17.39■□□□□ 0.37
Trim27-201ENSMUST00000021761 CatipB9EKE5 520 aa17.38■□□□□ 0.37
Trim27-201ENSMUST00000021761 Atxn3Q9CVD2 355 aa17.38■□□□□ 0.37
Trim27-201ENSMUST00000021761 Lamc3Q9R0B6 1581 aa17.38■□□□□ 0.37
Trim27-201ENSMUST00000021761 ErbinQ80TH2 1402 aa17.37■□□□□ 0.37
Trim27-201ENSMUST00000021761 Ppp1r18Q8BQ30 594 aa17.37■□□□□ 0.37
Trim27-201ENSMUST00000021761 Triml2E9PW10 424 aa17.37■□□□□ 0.37
Trim27-201ENSMUST00000021761 Rsph3aQ3UFY4 516 aa17.36■□□□□ 0.37
Trim27-201ENSMUST00000021761 Fam163aQ8CAA5 168 aa17.36■□□□□ 0.37
Trim27-201ENSMUST00000021761 Egfem1Q8C088 590 aa17.36■□□□□ 0.37
Trim27-201ENSMUST00000021761 Plb1Q3TTY0 1478 aa17.35■□□□□ 0.37
Trim27-201ENSMUST00000021761 Psme1P97371 249 aa17.35■□□□□ 0.37
Trim27-201ENSMUST00000021761 MccE9PWI3 1003 aa17.35■□□□□ 0.37
Trim27-201ENSMUST00000021761 Rbm25B2RY56 838 aaKnown RBP17.35■□□□□ 0.37
Trim27-201ENSMUST00000021761 Ppp2r3aB2RXC8 1150 aa17.34■□□□□ 0.37
Trim27-201ENSMUST00000021761 Eif4g2Q62448 906 aaKnown RBP17.33■□□□□ 0.36
Trim27-201ENSMUST00000021761 CgnP59242 1191 aa17.33■□□□□ 0.36
Trim27-201ENSMUST00000021761 Znf692Q3U381 531 aa17.32■□□□□ 0.36
Trim27-201ENSMUST00000021761 Nek4Q9Z1J2 792 aa17.32■□□□□ 0.36
Trim27-201ENSMUST00000021761 SynmQ70IV5 1561 aa17.31■□□□□ 0.36
Trim27-201ENSMUST00000021761 Dusp27Q148W8 1138 aa17.31■□□□□ 0.36
Trim27-201ENSMUST00000021761 Nsd2Q8BVE8 1365 aa17.31■□□□□ 0.36
Trim27-201ENSMUST00000021761 Rrp12Q6P5B0 1295 aaKnown RBP17.31■□□□□ 0.36
Trim27-201ENSMUST00000021761 Atl3Q91YH5 541 aa17.3■□□□□ 0.36
Trim27-201ENSMUST00000021761 Usp16Q99LG0 825 aa17.3■□□□□ 0.36
Trim27-201ENSMUST00000021761 MyclP10166 368 aa17.3■□□□□ 0.36
Trim27-201ENSMUST00000021761 Brpf1B2RRD7 1212 aa17.29■□□□□ 0.36
Trim27-201ENSMUST00000021761 Cog6Q8R3I3 657 aa17.29■□□□□ 0.36
Trim27-201ENSMUST00000021761 Q9D9H8 365 aa17.29■□□□□ 0.36
Trim27-201ENSMUST00000021761 Prdm16A2A935 1275 aa17.29■□□□□ 0.36
Trim27-201ENSMUST00000021761 Stk31Q99MW1 1018 aa17.29■□□□□ 0.36
Trim27-201ENSMUST00000021761 Gpatch8A2A6A1 1505 aa17.28■□□□□ 0.36
Trim27-201ENSMUST00000021761 Pes1Q9EQ61 584 aaKnown RBP17.28■□□□□ 0.36
Trim27-201ENSMUST00000021761 Arhgap5P97393 1501 aa17.28■□□□□ 0.36
Trim27-201ENSMUST00000021761 Gpatch11Q3UFS4 262 aa17.27■□□□□ 0.36
Trim27-201ENSMUST00000021761 Smc5Q8CG46 1101 aaKnown RBP17.27■□□□□ 0.36
Trim27-201ENSMUST00000021761 Kank1E9Q238 1360 aa17.27■□□□□ 0.35
Trim27-201ENSMUST00000021761 Ncoa3O09000 1398 aa17.26■□□□□ 0.35
Trim27-201ENSMUST00000021761 Casq1O09165 405 aa17.26■□□□□ 0.35
Trim27-201ENSMUST00000021761 IbspQ61711 324 aa17.26■□□□□ 0.35
Trim27-201ENSMUST00000021761 Ric3Q8BPM6 367 aa17.26■□□□□ 0.35
Trim27-201ENSMUST00000021761 Nol12Q8BG17 217 aa17.26■□□□□ 0.35
Trim27-201ENSMUST00000021761 Q9D2X8 372 aa17.26■□□□□ 0.35
Trim27-201ENSMUST00000021761 Phactr2B1AVP0 632 aa17.25■□□□□ 0.35
Trim27-201ENSMUST00000021761 Atp2b2Q9R0K7 1198 aa17.25■□□□□ 0.35
Trim27-201ENSMUST00000021761 Rassf8Q8CJ96 419 aa17.25■□□□□ 0.35
Trim27-201ENSMUST00000021761 Sh3bp5Q9Z131 463 aa17.25■□□□□ 0.35
Trim27-201ENSMUST00000021761 SkilQ60665 675 aa17.24■□□□□ 0.35
Trim27-201ENSMUST00000021761 Thoc2B1AZI6 1594 aaKnown RBP17.24■□□□□ 0.35
Trim27-201ENSMUST00000021761 Cabp4Q8VHC5 271 aa17.24■□□□□ 0.35
Trim27-201ENSMUST00000021761 CrebrfQ8CDG5 640 aaKnown RBP17.24■□□□□ 0.35
Trim27-201ENSMUST00000021761 Slc4a10Q5DTL9 1118 aa17.23■□□□□ 0.35
Trim27-201ENSMUST00000021761 Swt1Q9DBQ9 907 aa17.23■□□□□ 0.35
Trim27-201ENSMUST00000021761 Pknox2Q8BG99 474 aa17.23■□□□□ 0.35
Trim27-201ENSMUST00000021761 Pik3c2gO70167 1506 aa17.22■□□□□ 0.35
Trim27-201ENSMUST00000021761 Sptbn5F6UCX4 1208 aa17.22■□□□□ 0.35
Trim27-201ENSMUST00000021761 Kif18aQ91WD7 886 aa17.22■□□□□ 0.35
Trim27-201ENSMUST00000021761 BC005561E9Q5E2 1589 aa17.22■□□□□ 0.35
Trim27-201ENSMUST00000021761 Gsto1O09131 240 aa17.22■□□□□ 0.35
Trim27-201ENSMUST00000021761 Ssh1Q76I79 1042 aa17.21■□□□□ 0.35
Trim27-201ENSMUST00000021761 Rnf214Q8BFU3 668 aaKnown RBP17.21■□□□□ 0.35
Trim27-201ENSMUST00000021761 MecomP14404 1042 aa17.21■□□□□ 0.35
Trim27-201ENSMUST00000021761 Ddrgk1Q80WW9 315 aa17.2■□□□□ 0.34
Trim27-201ENSMUST00000021761 Polr3aB2RXC6 1390 aa17.2■□□□□ 0.34
Trim27-201ENSMUST00000021761 PtmsQ9D0J8 101 aaKnown RBP17.2■□□□□ 0.34
Trim27-201ENSMUST00000021761 VgfQ0VGU4 617 aa17.2■□□□□ 0.34
Trim27-201ENSMUST00000021761 Erbb3Q61526 1339 aa17.2■□□□□ 0.34
Trim27-201ENSMUST00000021761 Rfx7F8VPJ6 1459 aa17.19■□□□□ 0.34
Trim27-201ENSMUST00000021761 Grin2aP35436 1464 aa17.19■□□□□ 0.34
Trim27-201ENSMUST00000021761 Iffo2Q8R2V2 512 aa17.19■□□□□ 0.34
Trim27-201ENSMUST00000021761 Cald1E9QA15 768 aaKnown RBP17.19■□□□□ 0.34
Trim27-201ENSMUST00000021761 Cgnl1Q6AW69 1298 aa17.19■□□□□ 0.34
Trim27-201ENSMUST00000021761 4933402E13RikQ9D4D2 429 aa17.19■□□□□ 0.34
Trim27-201ENSMUST00000021761 Cavin4A2AMM0 362 aa17.18■□□□□ 0.34
Trim27-201ENSMUST00000021761 Maco1Q7TQE6 664 aaKnown RBP17.18■□□□□ 0.34
Trim27-201ENSMUST00000021761 Clstn1Q9EPL2 979 aa17.18■□□□□ 0.34
Trim27-201ENSMUST00000021761 Tfip11Q9ERA6 838 aaKnown RBP17.18■□□□□ 0.34
Trim27-201ENSMUST00000021761 MsnP26041 577 aaKnown RBP17.18■□□□□ 0.34
Trim27-201ENSMUST00000021761 PogkQ80TC5 607 aa17.17■□□□□ 0.34
Trim27-201ENSMUST00000021761 Asxl1P59598 1514 aa17.17■□□□□ 0.34
Trim27-201ENSMUST00000021761 Filip1lQ6P6L0 1131 aa17.17■□□□□ 0.34
Trim27-201ENSMUST00000021761 Magi1Q6RHR9 1471 aa17.17■□□□□ 0.34
Trim27-201ENSMUST00000021761 Ccdc141E9Q8Q6 1531 aa17.17■□□□□ 0.34
Trim27-201ENSMUST00000021761 Zranb1Q7M760 708 aa17.16■□□□□ 0.34
Trim27-201ENSMUST00000021761 Ipo4Q8VI75 1082 aa17.16■□□□□ 0.34
Trim27-201ENSMUST00000021761 Gnai1B2RSH2 354 aa17.16■□□□□ 0.34
Trim27-201ENSMUST00000021761 Gnai3Q9DC51 354 aa17.16■□□□□ 0.34
Trim27-201ENSMUST00000021761 Pdcl3Q8BVF2 240 aa17.15■□□□□ 0.34
Trim27-201ENSMUST00000021761 Zfp777B9EKF4 885 aa17.14■□□□□ 0.33
Trim27-201ENSMUST00000021761 Samd1D3YXK1 519 aa17.14■□□□□ 0.33
Trim27-201ENSMUST00000021761 Ppp1r9bQ6R891 817 aaKnown RBP17.13■□□□□ 0.33
Trim27-201ENSMUST00000021761 Kdm5bQ80Y84 1544 aa17.13■□□□□ 0.33
Trim27-201ENSMUST00000021761 Becn1O88597 448 aa17.13■□□□□ 0.33
Trim27-201ENSMUST00000021761 Q4VA45 678 aa17.13■□□□□ 0.33
Trim27-201ENSMUST00000021761 Gas2l2Q5SSG4 860 aa17.13■□□□□ 0.33
Trim27-201ENSMUST00000021761 Camsap2Q8C1B1 1461 aa17.13■□□□□ 0.33
Trim27-201ENSMUST00000021761 Mrc2Q64449 1479 aa17.13■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms