RNA–Protein interactions for RNA: ENSMUST00000020877.8

Twistnb-201, Transcript of DNA-directed RNA polymerase I subunit RPA43, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Twistnb, Length 4,325 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Twistnb-201ENSMUST00000020877 Il16O54824 1322 aa16.16■□□□□ 0.18
Twistnb-201ENSMUST00000020877 Tnnt2P50752 301 aa16.16■□□□□ 0.18
Twistnb-201ENSMUST00000020877 Map3k5O35099 1380 aa16.16■□□□□ 0.18
Twistnb-201ENSMUST00000020877 HnrnpuQ8VEK3 800 aaKnown RBP16.16■□□□□ 0.18
Twistnb-201ENSMUST00000020877 Mug1P28665 1476 aa16.15■□□□□ 0.18
Twistnb-201ENSMUST00000020877 Cc2d1aQ8K1A6 943 aa16.15■□□□□ 0.18
Twistnb-201ENSMUST00000020877 Sptbn5F6UCX4 1208 aa16.14■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Ssh1Q76I79 1042 aa16.14■□□□□ 0.17
Twistnb-201ENSMUST00000020877 4933402E13RikQ9D4D2 429 aa16.14■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Wdr62Q3U3T8 1523 aa16.13■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Ddrgk1Q80WW9 315 aa16.13■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Atl3Q91YH5 541 aa16.13■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Lamc3Q9R0B6 1581 aa16.13■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Mink1Q9JM52 1308 aa16.12■□□□□ 0.17
Twistnb-201ENSMUST00000020877 VgfQ0VGU4 617 aa16.12■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Cog6Q8R3I3 657 aa16.12■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Nek4Q9Z1J2 792 aa16.11■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Tnnt1O88346 262 aa16.11■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Nkx1-2P42580 305 aa16.11■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Paxip1Q6NZQ4 1056 aa16.11■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Sall3Q62255 1320 aa16.11■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Stard8Q8K031 1019 aa16.11■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Urb2E9Q7L1 1524 aaKnown RBP16.1■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Gpatch11Q3UFS4 262 aa16.1■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Puf60Q3UEB3 564 aaKnown RBP16.1■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Camsap2Q8C1B1 1461 aa16.1■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Ppp1r9bQ6R891 817 aaKnown RBP16.1■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Triml2E9PW10 424 aa16.09■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Utp14aQ640M1 767 aaKnown RBP16.09■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Rbm25B2RY56 838 aaKnown RBP16.08■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Casq1O09165 405 aa16.08■□□□□ 0.17
Twistnb-201ENSMUST00000020877 Eif4g2Q62448 906 aaKnown RBP16.07■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Pik3c2gO70167 1506 aa16.07■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Dusp27Q148W8 1138 aa16.07■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Rnf214Q8BFU3 668 aaKnown RBP16.07■□□□□ 0.16
Twistnb-201ENSMUST00000020877 MccE9PWI3 1003 aa16.06■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Kif18aQ91WD7 886 aa16.06■□□□□ 0.16
Twistnb-201ENSMUST00000020877 CenpjQ569L8 1344 aa16.05■□□□□ 0.16
Twistnb-201ENSMUST00000020877 MsnP26041 577 aaKnown RBP16.05■□□□□ 0.16
Twistnb-201ENSMUST00000020877 CgnP59242 1191 aa16.05■□□□□ 0.16
Twistnb-201ENSMUST00000020877 SkilQ60665 675 aa16.05■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Gpatch8A2A6A1 1505 aa16.05■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Nol12Q8BG17 217 aa16.04■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Fam163aQ8CAA5 168 aa16.04■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Rbm10Q99KG3 930 aaKnown RBP16.04■□□□□ 0.16
Twistnb-201ENSMUST00000020877 SynmQ70IV5 1561 aa16.04■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Tfip11Q9ERA6 838 aaKnown RBP16.04■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Q3TQI7 289 aaKnown RBP16.03■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Gtf2a1Q99PM3 378 aa16.03■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Ush1cQ9ES64 910 aa16.03■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Becn1O88597 448 aa16.03■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Phf14Q9D4H9 881 aa16.03■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Ncoa3O09000 1398 aa16.03■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Shq1Q7TMX5 569 aa16.03■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Rtf1A2AQ19 715 aaKnown RBP16.02■□□□□ 0.16
Twistnb-201ENSMUST00000020877 Polr3aB2RXC6 1390 aa16.02■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Rfx7F8VPJ6 1459 aa16.02■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Phactr2B1AVP0 632 aa16.02■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Mcm4P49717 862 aa16.02■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Gas2l2Q5SSG4 860 aa16.02■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Q9D2X8 372 aa16.01■□□□□ 0.15
Twistnb-201ENSMUST00000020877 ErbinQ80TH2 1402 aa16.01■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Thoc2B1AZI6 1594 aaKnown RBP16.01■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Rrp9Q91WM3 475 aaKnown RBP16.01■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Usp16Q99LG0 825 aa16■□□□□ 0.15
Twistnb-201ENSMUST00000020877 BC005561E9Q5E2 1589 aa16■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Mrc2Q64449 1479 aa15.99■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Maco1Q7TQE6 664 aaKnown RBP15.99■□□□□ 0.15
Twistnb-201ENSMUST00000020877 PogkQ80TC5 607 aa15.99■□□□□ 0.15
Twistnb-201ENSMUST00000020877 PtmsQ9D0J8 101 aaKnown RBP15.99■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Eif4g1Q6NZJ6 1600 aaKnown RBP15.99■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Ric3Q8BPM6 367 aa15.98■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Asxl1P59598 1514 aa15.98■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Samd1D3YXK1 519 aa15.98■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Q4VA45 678 aa15.98■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Sox12Q04890 314 aa15.98■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Crocc2F6XLV1 1638 aa15.98■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Plb1Q3TTY0 1478 aa15.97■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Duxf3A0A0N4SV92 674 aa15.97■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Mug2P28666 1451 aa15.97■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Safb2Q80YR5 991 aaKnown RBP15.97■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Nsd2Q8BVE8 1365 aa15.97■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Swt1Q9DBQ9 907 aa15.96■□□□□ 0.15
Twistnb-201ENSMUST00000020877 Brpf1B2RRD7 1212 aa15.95■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Aplp1Q03157 653 aa15.95■□□□□ 0.14
Twistnb-201ENSMUST00000020877 CrebrfQ8CDG5 640 aaKnown RBP15.95■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Cgnl1Q6AW69 1298 aa15.95■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Cald1E9QA15 768 aaKnown RBP15.94■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Filip1lQ6P6L0 1131 aa15.94■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Prdm16A2A935 1275 aa15.94■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Catsper2A2ARP9 588 aa15.94■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Ubap1lG3UW59 384 aa15.93■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Stk31Q99MW1 1018 aa15.93■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Cavin4A2AMM0 362 aa15.93■□□□□ 0.14
Twistnb-201ENSMUST00000020877 AampJ3QN89 436 aa15.93■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Kiaa0754Q69ZZ9 979 aa15.93■□□□□ 0.14
Twistnb-201ENSMUST00000020877 TnnQ80Z71 1560 aa15.92■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Fbxo2Q80UW2 297 aa15.92■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Arhgap5P97393 1501 aa15.92■□□□□ 0.14
Twistnb-201ENSMUST00000020877 Wdr7Q920I9 1489 aa15.91■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms