RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A ATP10P18496 279 aa13.06□□□□□ -0.32
TRN1tP(UGG)A VMA8P32610 256 aaKnown RBP13.06□□□□□ -0.32
TRN1tP(UGG)A IES6P32617 166 aa13.06□□□□□ -0.32
TRN1tP(UGG)A BFR1P38934 470 aaKnown RBP RIP-Chip data13.06□□□□□ -0.32not detected
TRN1tP(UGG)A SSO2P39926 295 aa13.06□□□□□ -0.32
TRN1tP(UGG)A RPA34P47006 233 aaPredicted RBP13.06□□□□□ -0.32
TRN1tP(UGG)A THI74Q04083 370 aa13.06□□□□□ -0.32
TRN1tP(UGG)A SUA5P32579 426 aa13.05□□□□□ -0.32
TRN1tP(UGG)A YUH1P35127 236 aa13.05□□□□□ -0.32
TRN1tP(UGG)A LAG1P38703 411 aa13.05□□□□□ -0.32
TRN1tP(UGG)A LSM4P40070 187 aaKnown RBP13.05□□□□□ -0.32
TRN1tP(UGG)A YGR210CP42942 411 aa13.05□□□□□ -0.32
TRN1tP(UGG)A TTI2P47168 421 aa13.05□□□□□ -0.32
TRN1tP(UGG)A NIF3P53081 288 aa13.05□□□□□ -0.32
TRN1tP(UGG)A FEX1Q08913 375 aa13.05□□□□□ -0.32
TRN1tP(UGG)A BBP1Q12365 385 aa13.05□□□□□ -0.32
TRN1tP(UGG)A DGK1Q12382 290 aa13.05□□□□□ -0.32
TRN1tP(UGG)A TFB5Q3E7C1 72 aaPredicted RBP13.05□□□□□ -0.32
TRN1tP(UGG)A ISC10P32645 267 aa13.04□□□□□ -0.32
TRN1tP(UGG)A CPR5P35176 225 aa13.04□□□□□ -0.32
TRN1tP(UGG)A POP2P39008 433 aa13.04□□□□□ -0.32
TRN1tP(UGG)A PCL7P40186 285 aa13.04□□□□□ -0.32
TRN1tP(UGG)A MRPL22P53881 309 aa13.04□□□□□ -0.32
TRN1tP(UGG)A MEH1Q02205 184 aa13.04□□□□□ -0.32
TRN1tP(UGG)A YOR292CQ08743 309 aa13.04□□□□□ -0.32
TRN1tP(UGG)A TFC7Q12415 435 aa13.04□□□□□ -0.32
TRN1tP(UGG)A HUG1Q6Q5K6 68 aa13.04□□□□□ -0.32
TRN1tP(UGG)A DBP2P24783 546 aaKnown RBP13.03□□□□□ -0.32
TRN1tP(UGG)A ALG14P38242 237 aa13.03□□□□□ -0.32
TRN1tP(UGG)A CWC25P53854 179 aaKnown RBP13.03□□□□□ -0.32
TRN1tP(UGG)A ALG6Q12001 544 aaKnown RBP13.03□□□□□ -0.32
TRN1tP(UGG)A PRM4Q12498 284 aa13.03□□□□□ -0.32
TRN1tP(UGG)A OLE1P21147 510 aaKnown RBP13.02□□□□□ -0.33
TRN1tP(UGG)A TCA17P32613 152 aa13.02□□□□□ -0.33
TRN1tP(UGG)A SOR1P35497 357 aaKnown RBP13.02□□□□□ -0.33
TRN1tP(UGG)A WSC2P53832 503 aa13.02□□□□□ -0.33
TRN1tP(UGG)A SOR2Q07786 357 aa13.02□□□□□ -0.33
TRN1tP(UGG)A YLR125WQ12138 136 aa13.02□□□□□ -0.33
TRN1tP(UGG)A TPI1P00942 248 aaKnown RBP13.01□□□□□ -0.33
TRN1tP(UGG)A PUT1P09368 476 aa13.01□□□□□ -0.33
TRN1tP(UGG)A MRP20P32387 263 aa13.01□□□□□ -0.33
TRN1tP(UGG)A MIA40P36046 403 aa13.01□□□□□ -0.33
TRN1tP(UGG)A IRC24P40580 263 aa13.01□□□□□ -0.33
TRN1tP(UGG)A ASM4Q05166 528 aa13.01□□□□□ -0.33
TRN1tP(UGG)A QCR2P07257 368 aa13□□□□□ -0.33
TRN1tP(UGG)A UTP30P36144 274 aaKnown RBP13□□□□□ -0.33
TRN1tP(UGG)A CUE1P38428 203 aa13□□□□□ -0.33
TRN1tP(UGG)A RRF1P38771 230 aa13□□□□□ -0.33
TRN1tP(UGG)A ABM1P47146 123 aa13□□□□□ -0.33
TRN1tP(UGG)A YFH1Q07540 174 aa13□□□□□ -0.33
TRN1tP(UGG)A LSB5P25369 354 aa12.99□□□□□ -0.33
TRN1tP(UGG)A VMA11P32842 164 aa12.99□□□□□ -0.33
TRN1tP(UGG)A REC104P33323 182 aa12.99□□□□□ -0.33
TRN1tP(UGG)A GZF3P42944 551 aaKnown RBP12.99□□□□□ -0.33
TRN1tP(UGG)A YFL015CP43578 164 aa12.99□□□□□ -0.33
TRN1tP(UGG)A GAR1P28007 205 aaKnown RBP12.98□□□□□ -0.33
TRN1tP(UGG)A ERG2P32352 222 aa12.98□□□□□ -0.33
TRN1tP(UGG)A IKI1P38874 309 aa12.98□□□□□ -0.33
TRN1tP(UGG)A YDR415CQ04033 374 aaPredicted RBP12.98□□□□□ -0.33
TRN1tP(UGG)A PRP11Q07350 266 aaPredicted RBP12.98□□□□□ -0.33
TRN1tP(UGG)A YDL086WQ07505 273 aa12.98□□□□□ -0.33
TRN1tP(UGG)A YGL114WP53134 725 aa12.97□□□□□ -0.33
TRN1tP(UGG)A YER137CP40083 148 aaKnown RBP12.96□□□□□ -0.33
TRN1tP(UGG)A YIR035CP40579 254 aa12.96□□□□□ -0.33
TRN1tP(UGG)A SUT1P53032 299 aaKnown RBP12.96□□□□□ -0.33
TRN1tP(UGG)A ACB1P31787 87 aa12.95□□□□□ -0.34
TRN1tP(UGG)A APJ1P53940 528 aa12.95□□□□□ -0.34
TRN1tP(UGG)A LPP1Q04396 274 aa12.95□□□□□ -0.34
TRN1tP(UGG)A ARR2Q06597 130 aa12.95□□□□□ -0.34
TRN1tP(UGG)A YOL029CQ08187 201 aa12.95□□□□□ -0.34
TRN1tP(UGG)A YCT1Q12235 531 aa12.95□□□□□ -0.34
TRN1tP(UGG)A CKS1P20486 150 aaKnown RBP12.94□□□□□ -0.34
TRN1tP(UGG)A SRL3P36167 246 aa12.94□□□□□ -0.34
TRN1tP(UGG)A ADH5P38113 351 aaKnown RBP12.94□□□□□ -0.34
TRN1tP(UGG)A VPS28Q02767 242 aa12.94□□□□□ -0.34
TRN1tP(UGG)A YPD1Q07688 167 aa12.94□□□□□ -0.34
TRN1tP(UGG)A YOS1Q3E834 85 aa12.94□□□□□ -0.34
TRN1tP(UGG)A YPC1P38298 316 aa12.93□□□□□ -0.34
TRN1tP(UGG)A ROX3P25046 220 aa12.92□□□□□ -0.34
TRN1tP(UGG)A TIP1P27654 210 aaPredicted RBP12.92□□□□□ -0.34
TRN1tP(UGG)A COQ2P32378 372 aa12.92□□□□□ -0.34
TRN1tP(UGG)A ERV15P38312 142 aa12.92□□□□□ -0.34
TRN1tP(UGG)A RRP15Q06511 250 aaPredicted RBP12.91□□□□□ -0.34
TRN1tP(UGG)A BOL1Q3E793 110 aa12.91□□□□□ -0.34
TRN1tP(UGG)A CBT1P36038 271 aaPredicted RBP12.9□□□□□ -0.34
TRN1tP(UGG)A YGR045CP53229 120 aa12.9□□□□□ -0.34
TRN1tP(UGG)A YLR224WQ05947 369 aa12.9□□□□□ -0.34
TRN1tP(UGG)A HRD1Q08109 551 aa12.9□□□□□ -0.34
TRN1tP(UGG)A PMU1P36069 295 aa12.89□□□□□ -0.35
TRN1tP(UGG)A ADH6Q04894 360 aaKnown RBP12.89□□□□□ -0.35
TRN1tP(UGG)A YJR112W-AQ3E743 109 aa12.89□□□□□ -0.35
TRN1tP(UGG)A RPL9AP05738 191 aaKnown RBP12.88□□□□□ -0.35
TRN1tP(UGG)A YCR061WP25639 631 aa12.88□□□□□ -0.35
TRN1tP(UGG)A LSM12P38828 187 aaKnown RBP12.88□□□□□ -0.35
TRN1tP(UGG)A YJL118WP47022 219 aa12.88□□□□□ -0.35
TRN1tP(UGG)A MRPL50P53724 139 aa12.88□□□□□ -0.35
TRN1tP(UGG)A RRT7Q07829 113 aa12.88□□□□□ -0.35
TRN1tP(UGG)A YPR071WQ12346 211 aa12.88□□□□□ -0.35
TRN1tP(UGG)A YMR31P19955 123 aa12.87□□□□□ -0.35
TRN1tP(UGG)A YJR012CP47087 207 aa12.87□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms