RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C MRPL15P36523 253 aa5.23□□□□□ -1.57
VPS4YPR173C ARC40P38328 384 aaKnown RBP5.23□□□□□ -1.57
VPS4YPR173C HSP10P38910 106 aa5.23□□□□□ -1.57
VPS4YPR173C IRC22P40006 225 aa5.23□□□□□ -1.57
VPS4YPR173C URM1P40554 99 aaPredicted RBP5.23□□□□□ -1.57
VPS4YPR173C SEH1P53011 349 aaKnown RBP5.23□□□□□ -1.57
VPS4YPR173C ERG25P53045 309 aa5.23□□□□□ -1.57
VPS4YPR173C YAP1802P53309 568 aa5.23□□□□□ -1.57
VPS4YPR173C SMM1P53720 384 aaKnown RBP5.23□□□□□ -1.57
VPS4YPR173C YPR174CQ06616 221 aaPredicted RBP5.23□□□□□ -1.57
VPS4YPR173C MIM1Q08176 113 aa5.23□□□□□ -1.57
VPS4YPR173C FYV7Q12247 151 aa5.23□□□□□ -1.57
VPS4YPR173C ERG27Q12452 347 aaKnown RBP5.23□□□□□ -1.57
VPS4YPR173C YNR034W-AQ3E841 98 aa5.23□□□□□ -1.57
VPS4YPR173C MPD2Q99316 277 aa5.23□□□□□ -1.57
VPS4YPR173C SCEIP03882 235 aa5.23□□□□□ -1.57
VPS4YPR173C NHP6AP11632 93 aaKnown RBP5.23□□□□□ -1.57
VPS4YPR173C STP22P25604 385 aa5.23□□□□□ -1.57
VPS4YPR173C PPA2P28239 310 aa5.23□□□□□ -1.57
VPS4YPR173C ACP1P32463 125 aa5.23□□□□□ -1.57
VPS4YPR173C AIM3P38266 947 aaKnown RBP5.23□□□□□ -1.57
VPS4YPR173C FLO5P38894 1075 aa5.23□□□□□ -1.57
VPS4YPR173C NOP16P40007 231 aaKnown RBP5.23□□□□□ -1.57
VPS4YPR173C PAU5P43575 122 aa5.23□□□□□ -1.57
VPS4YPR173C NSA1P53136 463 aaPredicted RBP5.23□□□□□ -1.57
VPS4YPR173C PAU4P53427 120 aa5.23□□□□□ -1.57
VPS4YPR173C RHO5P53879 331 aaKnown RBP5.23□□□□□ -1.57
VPS4YPR173C ATC1Q04005 294 aa5.23□□□□□ -1.57
VPS4YPR173C FSH2Q05015 223 aa5.23□□□□□ -1.57
VPS4YPR173C FCY22Q12119 530 aa5.23□□□□□ -1.57
VPS4YPR173C YOP1Q12402 180 aa5.23□□□□□ -1.57
VPS4YPR173C AGC1Q12482 902 aa5.23□□□□□ -1.57
VPS4YPR173C YIL134C-AQ45U18 67 aa5.23□□□□□ -1.57
VPS4YPR173C YCL001W-BQ96VH2 84 aa5.23□□□□□ -1.57
VPS4YPR173C YDR157WA0A023PZE8 133 aa5.22□□□□□ -1.57
VPS4YPR173C CET1O13297 549 aaPredicted RBP5.22□□□□□ -1.57
VPS4YPR173C TDH3P00359 332 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
VPS4YPR173C TRP4P07285 380 aaPredicted RBP5.22□□□□□ -1.57
VPS4YPR173C RIP1P08067 215 aa5.22□□□□□ -1.57
VPS4YPR173C CKA1P15790 372 aa5.22□□□□□ -1.57
VPS4YPR173C AIM17P23180 465 aaKnown RBP5.22□□□□□ -1.57
VPS4YPR173C RPL14AP36105 138 aaKnown RBP5.22□□□□□ -1.57
VPS4YPR173C OM14P38325 134 aa5.22□□□□□ -1.57
VPS4YPR173C RPL14BP38754 138 aaKnown RBP5.22□□□□□ -1.57
VPS4YPR173C POP2P39008 433 aa5.22□□□□□ -1.57
VPS4YPR173C YNL208WP40159 199 aaKnown RBP5.22□□□□□ -1.57
VPS4YPR173C PIG2P40187 538 aa5.22□□□□□ -1.57
VPS4YPR173C ATG27P46989 271 aa5.22□□□□□ -1.57
VPS4YPR173C YJR012CP47087 207 aa5.22□□□□□ -1.57
VPS4YPR173C OST3P48439 350 aa5.22□□□□□ -1.57
VPS4YPR173C COQ5P49017 307 aa5.22□□□□□ -1.57
VPS4YPR173C YHM2Q04013 314 aa5.22□□□□□ -1.57
VPS4YPR173C YDL242WQ07746 117 aa5.22□□□□□ -1.57
VPS4YPR173C IRC19Q07843 230 aa5.22□□□□□ -1.57
VPS4YPR173C MCH4Q08268 501 aa5.22□□□□□ -1.57
VPS4YPR173C SME1Q12330 94 aaPredicted RBP5.22□□□□□ -1.57
VPS4YPR173C RAX2Q12465 1220 aa5.22□□□□□ -1.57
VPS4YPR173C YDL085C-AQ3E7B7 68 aaKnown RBP5.22□□□□□ -1.57
VPS4YPR173C ATP5P09457 212 aa5.21□□□□□ -1.58
VPS4YPR173C PAU1P0CE88 120 aa5.21□□□□□ -1.58
VPS4YPR173C PAU14P0CE89 120 aa5.21□□□□□ -1.58
VPS4YPR173C PAU6P0CE90 120 aa5.21□□□□□ -1.58
VPS4YPR173C PAU18P0CE91 120 aa5.21□□□□□ -1.58
VPS4YPR173C PAU8P0CE92 120 aa5.21□□□□□ -1.58
VPS4YPR173C PAU11P0CE93 120 aa5.21□□□□□ -1.58
VPS4YPR173C AFG1P32317 509 aa5.21□□□□□ -1.58
VPS4YPR173C UPS2P35200 230 aa5.21□□□□□ -1.58
VPS4YPR173C MIA40P36046 403 aa5.21□□□□□ -1.58
VPS4YPR173C YBR096WP38256 230 aa5.21□□□□□ -1.58
VPS4YPR173C PAU13P38725 120 aa5.21□□□□□ -1.58
VPS4YPR173C YJL193WP39542 402 aa5.21□□□□□ -1.58
VPS4YPR173C SHR5P41912 237 aa5.21□□□□□ -1.58
VPS4YPR173C YFR054CP43622 192 aa5.21□□□□□ -1.58
VPS4YPR173C RPA34P47006 233 aaPredicted RBP5.21□□□□□ -1.58
VPS4YPR173C YLR460CP54007 376 aa5.21□□□□□ -1.58
VPS4YPR173C PAU10Q03050 120 aa5.21□□□□□ -1.58
VPS4YPR173C YMR090WQ04304 227 aaKnown RBP5.21□□□□□ -1.58
VPS4YPR173C PAL1Q05518 499 aaKnown RBP5.21□□□□□ -1.58
VPS4YPR173C YPR147CQ06522 304 aaKnown RBP5.21□□□□□ -1.58
VPS4YPR173C PAU20Q08322 120 aa5.21□□□□□ -1.58
VPS4YPR173C ATG5Q12380 294 aa5.21□□□□□ -1.58
VPS4YPR173C HMS1Q12398 434 aa5.21□□□□□ -1.58
VPS4YPR173C PAU9Q3E770 120 aa5.21□□□□□ -1.58
VPS4YPR173C YMR084WA2P2R3 262 aa5.2□□□□□ -1.58
VPS4YPR173C DIF1O13577 133 aa5.2□□□□□ -1.58
VPS4YPR173C MDH2P22133 377 aa5.2□□□□□ -1.58
VPS4YPR173C MRS4P23500 304 aa5.2□□□□□ -1.58
VPS4YPR173C VMA16P23968 213 aa5.2□□□□□ -1.58
VPS4YPR173C YCR025CP25352 136 aa5.2□□□□□ -1.58
VPS4YPR173C ERG2P32352 222 aa5.2□□□□□ -1.58
VPS4YPR173C GLC7P32598 312 aaKnown RBP5.2□□□□□ -1.58
VPS4YPR173C SEF1P34228 1148 aa5.2□□□□□ -1.58
VPS4YPR173C MRPL11P36521 249 aaPredicted RBP5.2□□□□□ -1.58
VPS4YPR173C NSA2P40078 261 aaKnown RBP5.2□□□□□ -1.58
VPS4YPR173C HOL1P53389 586 aa5.2□□□□□ -1.58
VPS4YPR173C MSO1P53604 210 aaKnown RBP5.2□□□□□ -1.58
VPS4YPR173C SAE3P89114 91 aa5.2□□□□□ -1.58
VPS4YPR173C SNP1Q00916 300 aaPredicted RBP5.2□□□□□ -1.58
VPS4YPR173C RSM23Q01163 450 aa5.2□□□□□ -1.58
VPS4YPR173C YVH1Q02256 364 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 107.2 ms