RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C ABF2Q02486 183 aa2.05□□□□□ -2.08
CCL1YPR025C BOL1Q3E793 110 aa2.05□□□□□ -2.08
CCL1YPR025C CDC28P00546 298 aaKnown RBP2.04□□□□□ -2.08
CCL1YPR025C GRX2P17695 143 aaKnown RBP2.04□□□□□ -2.08
CCL1YPR025C OAC1P32332 324 aa2.04□□□□□ -2.08
CCL1YPR025C YER034WP40022 185 aaKnown RBP2.04□□□□□ -2.08
CCL1YPR025C BMT5P40493 336 aa2.04□□□□□ -2.08
CCL1YPR025C FYV6P53913 173 aa2.04□□□□□ -2.08
CCL1YPR025C NEJ1Q06148 342 aa2.04□□□□□ -2.08
CCL1YPR025C DRS2P39524 1355 aa2.03□□□□□ -2.08
CCL1YPR025C RPL27AP0C2H6 136 aaKnown RBP2.03□□□□□ -2.08
CCL1YPR025C RPL27BP0C2H7 136 aaKnown RBP2.03□□□□□ -2.08
CCL1YPR025C YCR087C-AP37263 153 aa2.03□□□□□ -2.08
CCL1YPR025C PHO88P38264 188 aaPredicted RBP2.03□□□□□ -2.08
CCL1YPR025C ERV15P38312 142 aa2.03□□□□□ -2.08
CCL1YPR025C LSM4P40070 187 aaKnown RBP2.03□□□□□ -2.08
CCL1YPR025C AYR1P40471 297 aa2.03□□□□□ -2.08
CCL1YPR025C BXI1P48558 297 aa2.03□□□□□ -2.08
CCL1YPR025C YMD8Q03697 442 aa2.03□□□□□ -2.08
CCL1YPR025C ARR2Q06597 130 aa2.03□□□□□ -2.08
CCL1YPR025C QCR6P00127 147 aa2.02□□□□□ -2.09
CCL1YPR025C YPR170W-BP0C5R9 85 aa2.02□□□□□ -2.09
CCL1YPR025C YHR180WP38868 163 aa2.02□□□□□ -2.09
CCL1YPR025C YFR054CP43622 192 aa2.02□□□□□ -2.09
CCL1YPR025C CYT2Q00873 224 aa2.02□□□□□ -2.09
CCL1YPR025C GRE1Q08969 168 aa2.02□□□□□ -2.09
CCL1YPR025C CDC8P00572 216 aa2.01□□□□□ -2.09
CCL1YPR025C APS1P35181 156 aa2.01□□□□□ -2.09
CCL1YPR025C YHR022CP38763 256 aa2.01□□□□□ -2.09
CCL1YPR025C IRC18P47056 224 aa2.01□□□□□ -2.09
CCL1YPR025C ERG25P53045 309 aa2.01□□□□□ -2.09
CCL1YPR025C PDR17P53844 350 aa2.01□□□□□ -2.09
CCL1YPR025C YML108WQ03759 105 aa2.01□□□□□ -2.09
CCL1YPR025C YDR248CQ03786 193 aa2.01□□□□□ -2.09
CCL1YPR025C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
CCL1YPR025C SEC4P07560 215 aaKnown RBP2□□□□□ -2.09
CCL1YPR025C RAD51P25454 400 aa2□□□□□ -2.09
CCL1YPR025C RME1P32338 300 aaKnown RBP2□□□□□ -2.09
CCL1YPR025C PEP8P40335 379 aa2□□□□□ -2.09
CCL1YPR025C YKE4P40544 346 aa2□□□□□ -2.09
CCL1YPR025C HOP2P53187 214 aa2□□□□□ -2.09
CCL1YPR025C GPM2Q12008 311 aa2□□□□□ -2.09
CCL1YPR025C TCA17P32613 152 aa1.99□□□□□ -2.09
CCL1YPR025C DOG2P38773 246 aa1.99□□□□□ -2.09
CCL1YPR025C TRM5P38793 499 aa1.99□□□□□ -2.09
CCL1YPR025C RSM25P40496 264 aa1.99□□□□□ -2.09
CCL1YPR025C PRM10P42946 383 aa1.99□□□□□ -2.09
CCL1YPR025C FAR7P43592 221 aa1.99□□□□□ -2.09
CCL1YPR025C MMS2P53152 137 aa1.99□□□□□ -2.09
CCL1YPR025C PET191Q02772 108 aa1.99□□□□□ -2.09
CCL1YPR025C SMD2Q06217 110 aaKnown RBP1.99□□□□□ -2.09
CCL1YPR025C LSO2Q3E772 92 aaKnown RBP1.99□□□□□ -2.09
CCL1YPR025C GCN3P14741 305 aa1.98□□□□□ -2.09
CCL1YPR025C ATP7P30902 174 aa1.98□□□□□ -2.09
CCL1YPR025C IRC22P40006 225 aa1.98□□□□□ -2.09
CCL1YPR025C ERG10P41338 398 aaKnown RBP1.98□□□□□ -2.09
CCL1YPR025C PRM8P53174 237 aa1.98□□□□□ -2.09
CCL1YPR025C YNR062CP53748 327 aa1.98□□□□□ -2.09
CCL1YPR025C YNL010WP53981 241 aaKnown RBP1.98□□□□□ -2.09
CCL1YPR025C LPP1Q04396 274 aa1.98□□□□□ -2.09
CCL1YPR025C USB1Q12208 290 aaKnown RBP1.98□□□□□ -2.09
CCL1YPR025C PSF1Q12488 208 aa1.98□□□□□ -2.09
CCL1YPR025C MRPL28P36527 147 aa1.97□□□□□ -2.09
CCL1YPR025C DID2P69771 204 aa1.97□□□□□ -2.09
CCL1YPR025C TRM12Q04235 462 aa1.97□□□□□ -2.09
CCL1YPR025C YNG1Q08465 219 aa1.97□□□□□ -2.09
CCL1YPR025C YHR214C-EQ8TGK0 99 aa1.97□□□□□ -2.09
CCL1YPR025C CDC7P06243 507 aa1.96□□□□□ -2.1
CCL1YPR025C DDI2P0CH63 225 aa1.96□□□□□ -2.1
CCL1YPR025C DDI3P0CH64 225 aa1.96□□□□□ -2.1
CCL1YPR025C RPL35AP0CX84 120 aaKnown RBP1.96□□□□□ -2.1
CCL1YPR025C RPL35BP0CX85 120 aaKnown RBP1.96□□□□□ -2.1
CCL1YPR025C KSS1P14681 368 aa1.96□□□□□ -2.1
CCL1YPR025C PET9P18239 318 aaKnown RBP1.96□□□□□ -2.1
CCL1YPR025C ATG22P25568 528 aa1.96□□□□□ -2.1
CCL1YPR025C PTM1P32857 523 aa1.96□□□□□ -2.1
CCL1YPR025C DSE2P38844 325 aa1.96□□□□□ -2.1
CCL1YPR025C EGD2P38879 174 aaKnown RBP1.96□□□□□ -2.1
CCL1YPR025C LSM7P53905 115 aaKnown RBP1.96□□□□□ -2.1
CCL1YPR025C SPG3Q04398 127 aaPredicted RBP1.96□□□□□ -2.1
CCL1YPR025C MDH2P22133 377 aa1.95□□□□□ -2.1
CCL1YPR025C ECM4P36156 370 aa1.95□□□□□ -2.1
CCL1YPR025C SEC72P39742 193 aaKnown RBP1.95□□□□□ -2.1
CCL1YPR025C VTC1P40046 129 aaRIP-Chip data1.95□□□□□ -2.1not detected
CCL1YPR025C AGE2P40529 298 aa1.95□□□□□ -2.1
CCL1YPR025C RPL33BP41056 107 aaKnown RBP1.95□□□□□ -2.1
CCL1YPR025C AIM25P47140 327 aa1.95□□□□□ -2.1
CCL1YPR025C GIM5Q04493 163 aa1.95□□□□□ -2.1
CCL1YPR025C GGA1Q06336 557 aa1.95□□□□□ -2.1
CCL1YPR025C CMC2Q3E7A4 109 aa1.95□□□□□ -2.1
CCL1YPR025C TDA8Q6B2U8 126 aa1.95□□□□□ -2.1
CCL1YPR025C REP2P03872 296 aa1.94□□□□□ -2.1
CCL1YPR025C MRS1P07266 363 aa1.94□□□□□ -2.1
CCL1YPR025C YLR156WP0CE96 114 aa1.94□□□□□ -2.1
CCL1YPR025C YLR159WP0CE97 114 aa1.94□□□□□ -2.1
CCL1YPR025C YLR161WP0CE98 114 aa1.94□□□□□ -2.1
CCL1YPR025C MEI4P29467 408 aa1.94□□□□□ -2.1
CCL1YPR025C ARC19P33204 171 aaKnown RBP1.94□□□□□ -2.1
CCL1YPR025C PGD1P40356 397 aa1.94□□□□□ -2.1
CCL1YPR025C AIF1P52923 378 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms