RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C YAL064W-BO13512 126 aa2.72□□□□□ -1.97
LCB4YOR171C STE7P06784 515 aa2.72□□□□□ -1.97
LCB4YOR171C YER039C-AP0CD97 72 aa2.72□□□□□ -1.97
LCB4YOR171C LSB5P25369 354 aa2.72□□□□□ -1.97
LCB4YOR171C RNP1P32385 249 aa2.72□□□□□ -1.97
LCB4YOR171C ALK2P32789 676 aaPredicted RBP2.72□□□□□ -1.97
LCB4YOR171C YBR062CP38239 180 aa2.72□□□□□ -1.97
LCB4YOR171C YIL169CP40442 995 aa2.72□□□□□ -1.97
LCB4YOR171C GLR1P41921 483 aaKnown RBP2.72□□□□□ -1.97
LCB4YOR171C MNN5P46982 586 aa2.72□□□□□ -1.97
LCB4YOR171C XPT1P47165 209 aa2.72□□□□□ -1.97
LCB4YOR171C RSM27P53305 110 aa2.72□□□□□ -1.97
LCB4YOR171C ARK1P53974 638 aa2.72□□□□□ -1.97
LCB4YOR171C YET2Q04210 160 aa2.72□□□□□ -1.97
LCB4YOR171C SPG4Q04438 115 aa2.72□□□□□ -1.97
LCB4YOR171C YLR446WQ06204 433 aa2.72□□□□□ -1.97
LCB4YOR171C YOL160WQ08321 113 aa2.72□□□□□ -1.97
LCB4YOR171C IES4Q08561 116 aa2.72□□□□□ -1.97
LCB4YOR171C FCF2Q12035 217 aaPredicted RBP2.72□□□□□ -1.97
LCB4YOR171C YLR118CQ12354 227 aa2.72□□□□□ -1.97
LCB4YOR171C SPS100P13130 326 aa2.71□□□□□ -1.98
LCB4YOR171C TRS65P32893 560 aa2.71□□□□□ -1.98
LCB4YOR171C YKL102CP34249 101 aa2.71□□□□□ -1.98
LCB4YOR171C PRY2P36110 329 aa2.71□□□□□ -1.98
LCB4YOR171C RFS1P38234 210 aaKnown RBP2.71□□□□□ -1.98
LCB4YOR171C YHL026CP38740 315 aa2.71□□□□□ -1.98
LCB4YOR171C HMF1P40037 129 aaKnown RBP2.71□□□□□ -1.98
LCB4YOR171C YPL073CP40323 161 aa2.71□□□□□ -1.98
LCB4YOR171C DFG10P40526 253 aa2.71□□□□□ -1.98
LCB4YOR171C YGR219WP53307 113 aa2.71□□□□□ -1.98
LCB4YOR171C YDR366CP87287 132 aa2.71□□□□□ -1.98
LCB4YOR171C SDC1Q03323 175 aa2.71□□□□□ -1.98
LCB4YOR171C TAF9Q05027 157 aa2.71□□□□□ -1.98
LCB4YOR171C YPR114WQ06107 315 aa2.71□□□□□ -1.98
LCB4YOR171C RRG7Q08774 242 aaPredicted RBP2.71□□□□□ -1.98
LCB4YOR171C SAS5Q99314 248 aa2.71□□□□□ -1.98
LCB4YOR171C YPL229WQ99395 206 aa2.71□□□□□ -1.98
LCB4YOR171C SEC4P07560 215 aaKnown RBP2.71□□□□□ -1.98
LCB4YOR171C SNF4P12904 322 aa2.71□□□□□ -1.98
LCB4YOR171C MSI1P13712 422 aa2.71□□□□□ -1.98
LCB4YOR171C PRE1P22141 198 aaKnown RBP2.71□□□□□ -1.98
LCB4YOR171C STP22P25604 385 aa2.71□□□□□ -1.98
LCB4YOR171C PEX4P29340 183 aa2.71□□□□□ -1.98
LCB4YOR171C ARN2P38724 620 aa2.71□□□□□ -1.98
LCB4YOR171C YFR054CP43622 192 aa2.71□□□□□ -1.98
LCB4YOR171C LCB3P47013 409 aa2.71□□□□□ -1.98
LCB4YOR171C SCS3P53012 380 aa2.71□□□□□ -1.98
LCB4YOR171C YGR039WP53225 103 aa2.71□□□□□ -1.98
LCB4YOR171C TDA7P53882 636 aaPredicted RBP2.71□□□□□ -1.98
LCB4YOR171C LSM7P53905 115 aaKnown RBP2.71□□□□□ -1.98
LCB4YOR171C LSM3P57743 89 aaKnown RBP2.71□□□□□ -1.98
LCB4YOR171C DAD3P69850 94 aa2.71□□□□□ -1.98
LCB4YOR171C AIM11P87275 137 aa2.71□□□□□ -1.98
LCB4YOR171C ODC1Q03028 310 aa2.71□□□□□ -1.98
LCB4YOR171C BET5Q03630 159 aa2.71□□□□□ -1.98
LCB4YOR171C YDR415CQ04033 374 aaPredicted RBP2.71□□□□□ -1.98
LCB4YOR171C YLR281CQ05863 155 aa2.71□□□□□ -1.98
LCB4YOR171C LIP2Q06005 328 aa2.71□□□□□ -1.98
LCB4YOR171C LOA1Q06508 300 aa2.71□□□□□ -1.98
LCB4YOR171C DGA1Q08650 418 aa2.71□□□□□ -1.98
LCB4YOR171C YOR376WQ08900 122 aa2.71□□□□□ -1.98
LCB4YOR171C FCY1Q12178 158 aa2.71□□□□□ -1.98
LCB4YOR171C YGK3Q12222 375 aaPredicted RBP2.71□□□□□ -1.98
LCB4YOR171C CSR2Q12734 1121 aa2.71□□□□□ -1.98
LCB4YOR171C SPP41P38904 1435 aa2.7□□□□□ -1.98
LCB4YOR171C SPS2P08459 502 aa2.7□□□□□ -1.98
LCB4YOR171C SKG1P36169 355 aa2.7□□□□□ -1.98
LCB4YOR171C MRP21P38175 177 aa2.7□□□□□ -1.98
LCB4YOR171C TRS20P38334 175 aa2.7□□□□□ -1.98
LCB4YOR171C MED6P38782 295 aa2.7□□□□□ -1.98
LCB4YOR171C TIF34P40217 347 aaKnown RBP2.7□□□□□ -1.98
LCB4YOR171C YNL320WP42840 284 aa2.7□□□□□ -1.98
LCB4YOR171C COS10P52924 374 aa2.7□□□□□ -1.98
LCB4YOR171C YKR005CQ02203 525 aa2.7□□□□□ -1.98
LCB4YOR171C DIG2Q03373 323 aaKnown RBP2.7□□□□□ -1.98
LCB4YOR171C YLR179CQ06252 201 aaKnown RBP2.7□□□□□ -1.98
LCB4YOR171C YOR342CQ12182 319 aa2.7□□□□□ -1.98
LCB4YOR171C APS1P35181 156 aa2.69□□□□□ -1.98
LCB4YOR171C YCR041WP37265 110 aa2.69□□□□□ -1.98
LCB4YOR171C YEA6P39953 335 aa2.69□□□□□ -1.98
LCB4YOR171C CAB4P53332 305 aa2.69□□□□□ -1.98
LCB4YOR171C INP1Q03694 420 aa2.69□□□□□ -1.98
LCB4YOR171C PRR2Q12310 699 aa2.69□□□□□ -1.98
LCB4YOR171C TFC7Q12415 435 aa2.69□□□□□ -1.98
LCB4YOR171C PRM4Q12498 284 aa2.69□□□□□ -1.98
LCB4YOR171C YBL112CQ3E7Y4 105 aa2.69□□□□□ -1.98
LCB4YOR171C FMP49A0A023PZB3 126 aa2.69□□□□□ -1.98
LCB4YOR171C YLR462WO13556 202 aa2.69□□□□□ -1.98
LCB4YOR171C ADH1P00330 348 aaKnown RBP2.69□□□□□ -1.98
LCB4YOR171C SIR2P06700 562 aa2.69□□□□□ -1.98
LCB4YOR171C RPL30P14120 105 aaKnown RBP2.69□□□□□ -1.98
LCB4YOR171C SPO13P23624 291 aa2.69□□□□□ -1.98
LCB4YOR171C YCR007CP25354 239 aa2.69□□□□□ -1.98
LCB4YOR171C YKR070WP36151 352 aaKnown RBP2.69□□□□□ -1.98
LCB4YOR171C MRPL39P36533 70 aa2.69□□□□□ -1.98
LCB4YOR171C PET8P38921 284 aa2.69□□□□□ -1.98
LCB4YOR171C HEM14P40012 539 aa2.69□□□□□ -1.98
LCB4YOR171C PEX17P40155 199 aa2.69□□□□□ -1.98
LCB4YOR171C GTT1P40582 234 aa2.69□□□□□ -1.98
LCB4YOR171C YNR062CP53748 327 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms