RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	BRR2	P32639	2163 aa	Known RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	QCR7	P00128	127 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	RPL7A	P05737	244 aa	Known RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	GPI16	P38875	610 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	PAU15	P40585	124 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	CUP9	P41817	306 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	ACS2	P52910	683 aa	Known RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	YNL184C	P53876	108 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	CNL1	Q06333	122 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	MCH1	Q07376	486 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	IRC25	Q07951	179 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	RPL7B	Q12213	244 aa	Known RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	ATG5	Q12380	294 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	SPO24	Q3E752	67 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	SLM5	P25345	492 aa	Known RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	MGM101	P32787	269 aa	Known RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	LSB3	P43603	459 aa	Known RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	RIB4	P50861	169 aa	Predicted RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	RPB5	P20434	215 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	SLY41	P22215	453 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	FIG1	P38224	298 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	YNL195C	P40168	261 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	YIP4	P53093	235 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	MTQ2	Q03920	221 aa	Predicted RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	YDR391C	Q04170	232 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	HNT1	Q04344	158 aa	Known RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	ISR1	Q06098	443 aa	Known RBP	3.58	□□□□□ -1.84
ATG2	YNL242W	YOR385W	Q08909	290 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	YPQ1	Q12010	308 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	ORT1	Q12375	292 aa		3.58	□□□□□ -1.84
ATG2	YNL242W	QCR2	P07257	368 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	MRS4	P23500	304 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	SUA7	P29055	345 aa	Predicted RBP	3.57	□□□□□ -1.84
ATG2	YNL242W	SDS24	P38314	527 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	PRP39	P39682	629 aa	Known RBP	3.57	□□□□□ -1.84
ATG2	YNL242W	YEA6	P39953	335 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	HRT1	Q08273	121 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	SCS22	Q6Q595	175 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	YGL010W	P25338	174 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	AGP1	P25376	633 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	SLC1	P33333	303 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	AUR1	P36107	401 aa	Predicted RBP	3.57	□□□□□ -1.84
ATG2	YNL242W	VBA2	P38358	474 aa	Known RBP	3.57	□□□□□ -1.84
ATG2	YNL242W	YPT35	P38815	214 aa	Known RBP	3.57	□□□□□ -1.84
ATG2	YNL242W	YFL054C	P43549	646 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	ABF2	Q02486	183 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	MIX14	Q04341	121 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	YOP1	Q12402	180 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	LAA1	P39526	2014 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	GAL7	P08431	366 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	AFG1	P32317	509 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	HEM14	P40012	539 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	YGR012W	P53206	393 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	ATG4	P53867	494 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	RCE1	Q03530	315 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	MRX8	Q05473	314 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	MRL1	Q06815	381 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	YOL024W	Q08172	172 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	TGS1	Q12052	315 aa		3.57	□□□□□ -1.84
ATG2	YNL242W	ARO2	P28777	376 aa	Known RBP	3.56	□□□□□ -1.84
ATG2	YNL242W	MRPS9	P38120	278 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	YER188W	P40103	239 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	HIT1	P46973	164 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	ATC1	Q04005	294 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	YML096W	Q04489	525 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	IZH2	Q12442	317 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	TRS65	P32893	560 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	TRS20	P38334	175 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	YAL037W	P39728	267 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	YDL183C	P48569	320 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	NIF3	P53081	288 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	YPR147C	Q06522	304 aa	Known RBP	3.56	□□□□□ -1.84
ATG2	YNL242W	URA5	P13298	226 aa	Known RBP	3.56	□□□□□ -1.84
ATG2	YNL242W	DPM1	P14020	267 aa	Known RBP	3.56	□□□□□ -1.84
ATG2	YNL242W	HMX1	P32339	317 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	PAU5	P43575	122 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	UBC9	P50623	157 aa	Predicted RBP	3.56	□□□□□ -1.84
ATG2	YNL242W	TNA1	P53322	534 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	MSB2	P32334	1306 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	COX9	P07255	59 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	RPL1A	P0CX43	217 aa	Known RBP	3.56	□□□□□ -1.84
ATG2	YNL242W	RPL1B	P0CX44	217 aa	Known RBP	3.56	□□□□□ -1.84
ATG2	YNL242W	LSB5	P25369	354 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	MRPL27	P36526	146 aa	Predicted RBP	3.56	□□□□□ -1.84
ATG2	YNL242W	UMP1	P38293	148 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	YIL152W	P40455	235 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	SHR5	P41912	237 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	SMM1	P53720	384 aa	Known RBP	3.56	□□□□□ -1.84
ATG2	YNL242W	HHT1	P61830	136 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	SUL2	Q12325	893 aa		3.56	□□□□□ -1.84
ATG2	YNL242W	YLL053C	P0CD98	152 aa		3.55	□□□□□ -1.84
ATG2	YNL242W	DDI2	P0CH63	225 aa		3.55	□□□□□ -1.84
ATG2	YNL242W	DDI3	P0CH64	225 aa		3.55	□□□□□ -1.84
ATG2	YNL242W	CBS1	P14066	229 aa		3.55	□□□□□ -1.84
ATG2	YNL242W	YCL042W	P25572	119 aa		3.55	□□□□□ -1.84
ATG2	YNL242W	CSH1	P38287	376 aa		3.55	□□□□□ -1.84
ATG2	YNL242W	YEA4	P40004	342 aa		3.55	□□□□□ -1.84
ATG2	YNL242W	SPC25	P40014	221 aa		3.55	□□□□□ -1.84
ATG2	YNL242W	YMR090W	Q04304	227 aa	Known RBP	3.55	□□□□□ -1.84
ATG2	YNL242W	SEI1	Q06058	285 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms