RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W REP2P03872 296 aa0.97□□□□□ -2.25
DDR48YMR173W RHO1P06780 209 aaKnown RBP0.97□□□□□ -2.25
DDR48YMR173W YPR170W-BP0C5R9 85 aa0.97□□□□□ -2.25
DDR48YMR173W STE18P18852 110 aa0.97□□□□□ -2.25
DDR48YMR173W COQ1P18900 473 aa0.97□□□□□ -2.25
DDR48YMR173W APS1P35181 156 aa0.97□□□□□ -2.25
DDR48YMR173W SRY1P36007 326 aa0.97□□□□□ -2.25
DDR48YMR173W MRPL28P36527 147 aa0.97□□□□□ -2.25
DDR48YMR173W POP4P38336 279 aa0.97□□□□□ -2.25
DDR48YMR173W IRC22P40006 225 aa0.97□□□□□ -2.25
DDR48YMR173W PGD1P40356 397 aa0.97□□□□□ -2.25
DDR48YMR173W BXI1P48558 297 aa0.97□□□□□ -2.25
DDR48YMR173W MGA1P53050 456 aa0.97□□□□□ -2.25
DDR48YMR173W YDR248CQ03786 193 aa0.97□□□□□ -2.25
DDR48YMR173W LPP1Q04396 274 aa0.97□□□□□ -2.25
DDR48YMR173W YMR226CQ05016 267 aaKnown RBP0.97□□□□□ -2.25
DDR48YMR173W JLP1Q12358 412 aa0.97□□□□□ -2.25
DDR48YMR173W DRS2P39524 1355 aa0.96□□□□□ -2.26
DDR48YMR173W CFT1Q06632 1357 aaKnown RBP0.96□□□□□ -2.26
DDR48YMR173W CYR1P08678 2026 aaKnown RBP0.96□□□□□ -2.26
DDR48YMR173W FLO9P39712 1322 aa0.96□□□□□ -2.26
DDR48YMR173W RPL28P02406 149 aaKnown RBP0.96□□□□□ -2.26
DDR48YMR173W ATG22P25568 528 aa0.96□□□□□ -2.26
DDR48YMR173W TCA17P32613 152 aa0.96□□□□□ -2.26
DDR48YMR173W MGM101P32787 269 aaKnown RBP0.96□□□□□ -2.26
DDR48YMR173W PRX1P34227 261 aaKnown RBP0.96□□□□□ -2.26
DDR48YMR173W SKG1P36169 355 aa0.96□□□□□ -2.26
DDR48YMR173W UMP1P38293 148 aa0.96□□□□□ -2.26
DDR48YMR173W MIC12P38341 106 aa0.96□□□□□ -2.26
DDR48YMR173W TRM5P38793 499 aa0.96□□□□□ -2.26
DDR48YMR173W RTC3P38804 111 aaPredicted RBP0.96□□□□□ -2.26
DDR48YMR173W ERG28P40030 148 aa0.96□□□□□ -2.26
DDR48YMR173W RAD17P48581 401 aa0.96□□□□□ -2.26
DDR48YMR173W BOL2P53082 120 aa0.96□□□□□ -2.26
DDR48YMR173W PDR17P53844 350 aa0.96□□□□□ -2.26
DDR48YMR173W TIM11P81449 96 aaPredicted RBP0.96□□□□□ -2.26
DDR48YMR173W MRPS17Q03246 237 aaPredicted RBP0.96□□□□□ -2.26
DDR48YMR173W BNA7Q04066 261 aa0.96□□□□□ -2.26
DDR48YMR173W SPG3Q04398 127 aaPredicted RBP0.96□□□□□ -2.26
DDR48YMR173W YKL183C-AQ3E765 70 aa0.96□□□□□ -2.26
DDR48YMR173W TSC3Q3E790 80 aa0.96□□□□□ -2.26
DDR48YMR173W CDC28P00546 298 aaKnown RBP0.95□□□□□ -2.26
DDR48YMR173W SEC4P07560 215 aaKnown RBP0.95□□□□□ -2.26
DDR48YMR173W RPL27BP0C2H7 136 aaKnown RBP0.95□□□□□ -2.26
DDR48YMR173W GCN3P14741 305 aa0.95□□□□□ -2.26
DDR48YMR173W MRPS28P21771 286 aa0.95□□□□□ -2.26
DDR48YMR173W MAG1P22134 296 aaKnown RBP0.95□□□□□ -2.26
DDR48YMR173W DBF2P22204 572 aa0.95□□□□□ -2.26
DDR48YMR173W SNC2P33328 115 aa0.95□□□□□ -2.26
DDR48YMR173W PRP18P33411 251 aaPredicted RBP0.95□□□□□ -2.26
DDR48YMR173W SHE2P36068 246 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
DDR48YMR173W SIP3P38717 1229 aa0.95□□□□□ -2.26
DDR48YMR173W IKI1P38874 309 aa0.95□□□□□ -2.26
DDR48YMR173W YNL217WP40152 326 aa0.95□□□□□ -2.26
DDR48YMR173W YRB2P40517 327 aa0.95□□□□□ -2.26
DDR48YMR173W AIF1P52923 378 aa0.95□□□□□ -2.26
DDR48YMR173W CGR1P53188 120 aa0.95□□□□□ -2.26
DDR48YMR173W SWP1Q02795 286 aa0.95□□□□□ -2.26
DDR48YMR173W SNZ1Q03148 297 aa0.95□□□□□ -2.26
DDR48YMR173W CDC33P07260 213 aaKnown RBP0.94□□□□□ -2.26
DDR48YMR173W YLR156WP0CE96 114 aa0.94□□□□□ -2.26
DDR48YMR173W YLR159WP0CE97 114 aa0.94□□□□□ -2.26
DDR48YMR173W YLR161WP0CE98 114 aa0.94□□□□□ -2.26
DDR48YMR173W URA5P13298 226 aaKnown RBP0.94□□□□□ -2.26
DDR48YMR173W FZF1P32805 299 aa0.94□□□□□ -2.26
DDR48YMR173W YET1P35723 206 aa0.94□□□□□ -2.26
DDR48YMR173W ADO1P47143 340 aaKnown RBP0.94□□□□□ -2.26
DDR48YMR173W DOC1P53068 250 aa0.94□□□□□ -2.26
DDR48YMR173W ALG13P53178 202 aa0.94□□□□□ -2.26
DDR48YMR173W YGR050CP53231 118 aa0.94□□□□□ -2.26
DDR48YMR173W COG5P53951 403 aa0.94□□□□□ -2.26
DDR48YMR173W ABP140Q08641 628 aaKnown RBP0.94□□□□□ -2.26
DDR48YMR173W GPM2Q12008 311 aa0.94□□□□□ -2.26
DDR48YMR173W FSF1Q12029 327 aaKnown RBP0.94□□□□□ -2.26
DDR48YMR173W RPL25P04456 142 aaKnown RBP0.93□□□□□ -2.26
DDR48YMR173W KSS1P14681 368 aa0.93□□□□□ -2.26
DDR48YMR173W IDH1P28834 360 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
DDR48YMR173W TFC1P32367 649 aa0.93□□□□□ -2.26
DDR48YMR173W SEC17P32602 292 aa0.93□□□□□ -2.26
DDR48YMR173W TMA19P35691 167 aaKnown RBP0.93□□□□□ -2.26
DDR48YMR173W YKT6P36015 200 aaKnown RBP0.93□□□□□ -2.26
DDR48YMR173W MRPL17P36528 281 aa0.93□□□□□ -2.26
DDR48YMR173W YBR209WP38311 105 aa0.93□□□□□ -2.26
DDR48YMR173W RMD6P39975 231 aa0.93□□□□□ -2.26
DDR48YMR173W YNL194CP40169 301 aa0.93□□□□□ -2.26
DDR48YMR173W GVP36P40531 326 aaKnown RBP0.93□□□□□ -2.26
DDR48YMR173W CWC23P52868 283 aaPredicted RBP0.93□□□□□ -2.26
DDR48YMR173W CUS2P53830 285 aaPredicted RBP0.93□□□□□ -2.26
DDR48YMR173W LSM7P53905 115 aaKnown RBP0.93□□□□□ -2.26
DDR48YMR173W YDR249CQ03787 373 aa0.93□□□□□ -2.26
DDR48YMR173W MDM32Q12171 622 aa0.93□□□□□ -2.26
DDR48YMR173W TDA8Q6B2U8 126 aa0.93□□□□□ -2.26
DDR48YMR173W CPA1P07258 411 aaKnown RBP0.92□□□□□ -2.26
DDR48YMR173W RPB3P16370 318 aaKnown RBP0.92□□□□□ -2.26
DDR48YMR173W BET1P22804 142 aa0.92□□□□□ -2.26
DDR48YMR173W PTM1P32857 523 aa0.92□□□□□ -2.26
DDR48YMR173W CBT1P36038 271 aaPredicted RBP0.92□□□□□ -2.26
DDR48YMR173W YCR087C-AP37263 153 aa0.92□□□□□ -2.26
DDR48YMR173W YBR285WP38354 144 aa0.92□□□□□ -2.26
DDR48YMR173W GAA1P39012 614 aa0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms