RNA–Protein interactions for RNA: YMR001C

CDC5, Transcript of Polo-like kinase, yeastyeast

Gene CDC5, Length 2,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC5YMR001C YLR156WP0CE96 114 aa2.09□□□□□ -2.08
CDC5YMR001C YLR159WP0CE97 114 aa2.09□□□□□ -2.08
CDC5YMR001C YLR161WP0CE98 114 aa2.09□□□□□ -2.08
CDC5YMR001C MATALPHA2P0CY08 210 aa2.09□□□□□ -2.08
CDC5YMR001C HMLALPHA2P0CY09 210 aa2.09□□□□□ -2.08
CDC5YMR001C GCN3P14741 305 aa2.09□□□□□ -2.08
CDC5YMR001C IDH1P28834 360 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
CDC5YMR001C YGR026WP53217 278 aa2.09□□□□□ -2.08
CDC5YMR001C MRPS8Q03799 155 aa2.09□□□□□ -2.08
CDC5YMR001C USB1Q12208 290 aaKnown RBP2.09□□□□□ -2.08
CDC5YMR001C SCL1P21243 252 aaKnown RBP2.08□□□□□ -2.08
CDC5YMR001C MRPL28P36527 147 aa2.08□□□□□ -2.08
CDC5YMR001C RFC4P40339 323 aaKnown RBP2.08□□□□□ -2.08
CDC5YMR001C SSQ1Q05931 657 aaPredicted RBP2.08□□□□□ -2.08
CDC5YMR001C NEJ1Q06148 342 aa2.08□□□□□ -2.08
CDC5YMR001C TDA8Q6B2U8 126 aa2.08□□□□□ -2.08
CDC5YMR001C CBF1P17106 351 aa2.08□□□□□ -2.08
CDC5YMR001C YAR068WP39564 161 aa2.08□□□□□ -2.08
CDC5YMR001C GAS3Q03655 524 aa2.08□□□□□ -2.08
CDC5YMR001C YFR032C-BQ8TGU2 87 aa2.08□□□□□ -2.08
CDC5YMR001C YOL160WQ08321 113 aa2.07□□□□□ -2.08
CDC5YMR001C LSO2Q3E772 92 aaKnown RBP2.07□□□□□ -2.08
CDC5YMR001C CDC8P00572 216 aa2.06□□□□□ -2.08
CDC5YMR001C YNR062CP53748 327 aa2.06□□□□□ -2.08
CDC5YMR001C LSM7P53905 115 aaKnown RBP2.06□□□□□ -2.08
CDC5YMR001C VMA11P32842 164 aa2.06□□□□□ -2.08
CDC5YMR001C YRB2P40517 327 aa2.06□□□□□ -2.08
CDC5YMR001C ERG10P41338 398 aaKnown RBP2.06□□□□□ -2.08
CDC5YMR001C BOL2P53082 120 aa2.06□□□□□ -2.08
CDC5YMR001C ARO80Q04052 950 aa2.06□□□□□ -2.08
CDC5YMR001C YHR086W-AQ3E746 53 aa2.06□□□□□ -2.08
CDC5YMR001C RAD9P14737 1309 aa2.06□□□□□ -2.08
CDC5YMR001C ASF2P32448 525 aaPredicted RBP2.05□□□□□ -2.08
CDC5YMR001C NRG2P38082 220 aa2.05□□□□□ -2.08
CDC5YMR001C POP4P38336 279 aa2.05□□□□□ -2.08
CDC5YMR001C COG5P53951 403 aa2.05□□□□□ -2.08
CDC5YMR001C YRA1Q12159 226 aaKnown RBP2.05□□□□□ -2.08
CDC5YMR001C MSW1P04803 379 aa2.05□□□□□ -2.08
CDC5YMR001C DDI2P0CH63 225 aa2.05□□□□□ -2.08
CDC5YMR001C DDI3P0CH64 225 aa2.05□□□□□ -2.08
CDC5YMR001C ATP15P21306 62 aa2.05□□□□□ -2.08
CDC5YMR001C PEX4P29340 183 aa2.05□□□□□ -2.08
CDC5YMR001C MRPL17P36528 281 aa2.05□□□□□ -2.08
CDC5YMR001C DOC1P53068 250 aa2.05□□□□□ -2.08
CDC5YMR001C YNR077CP53758 84 aa2.05□□□□□ -2.08
CDC5YMR001C MRS1P07266 363 aa2.04□□□□□ -2.08
CDC5YMR001C AIF1P52923 378 aa2.04□□□□□ -2.08
CDC5YMR001C SWP1Q02795 286 aa2.04□□□□□ -2.08
CDC5YMR001C ATO3Q12359 275 aa2.04□□□□□ -2.08
CDC5YMR001C MHT1Q12525 324 aa2.04□□□□□ -2.08
CDC5YMR001C CHD1P32657 1468 aa2.04□□□□□ -2.08
CDC5YMR001C MDH3P32419 343 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
CDC5YMR001C PTM1P32857 523 aa2.03□□□□□ -2.08
CDC5YMR001C FMP23P38231 175 aa2.03□□□□□ -2.08
CDC5YMR001C PHO88P38264 188 aaPredicted RBP2.03□□□□□ -2.08
CDC5YMR001C ICE2P40499 491 aa2.03□□□□□ -2.08
CDC5YMR001C UBC12P52491 188 aa2.03□□□□□ -2.08
CDC5YMR001C DAD3P69850 94 aa2.03□□□□□ -2.08
CDC5YMR001C CDD1Q06549 142 aa2.03□□□□□ -2.08
CDC5YMR001C YPL162CQ12042 273 aa2.03□□□□□ -2.08
CDC5YMR001C ADH3P07246 375 aaKnown RBP2.03□□□□□ -2.08
CDC5YMR001C PUT1P09368 476 aa2.03□□□□□ -2.08
CDC5YMR001C PET9P18239 318 aaKnown RBP2.03□□□□□ -2.08
CDC5YMR001C YMR226CQ05016 267 aaKnown RBP2.03□□□□□ -2.08
CDC5YMR001C GRE1Q08969 168 aa2.03□□□□□ -2.08
CDC5YMR001C YOR283WQ12040 230 aaKnown RBP2.03□□□□□ -2.08
CDC5YMR001C RPL27BP0C2H7 136 aaKnown RBP2.02□□□□□ -2.09
CDC5YMR001C CNB1P25296 175 aa2.02□□□□□ -2.09
CDC5YMR001C FAS1P07149 2051 aaKnown RBP2.02□□□□□ -2.09
CDC5YMR001C RPB3P16370 318 aaKnown RBP2.02□□□□□ -2.09
CDC5YMR001C YIL001WP40560 513 aa2.02□□□□□ -2.09
CDC5YMR001C AIM25P47140 327 aa2.02□□□□□ -2.09
CDC5YMR001C GET1P53192 235 aa2.02□□□□□ -2.09
CDC5YMR001C ATG22P25568 528 aa2.01□□□□□ -2.09
CDC5YMR001C YKE4P40544 346 aa2.01□□□□□ -2.09
CDC5YMR001C YMD8Q03697 442 aa2.01□□□□□ -2.09
CDC5YMR001C KSS1P14681 368 aa2□□□□□ -2.09
CDC5YMR001C ERV15P38312 142 aa2□□□□□ -2.09
CDC5YMR001C MMS2P53152 137 aa2□□□□□ -2.09
CDC5YMR001C PDR18P53756 1333 aa2□□□□□ -2.09
CDC5YMR001C TIM9O74700 87 aa2□□□□□ -2.09
CDC5YMR001C PGD1P40356 397 aa2□□□□□ -2.09
CDC5YMR001C ARP3P47117 449 aaKnown RBP2□□□□□ -2.09
CDC5YMR001C CGR1P53188 120 aa2□□□□□ -2.09
CDC5YMR001C YGR219WP53307 113 aa2□□□□□ -2.09
CDC5YMR001C YML108WQ03759 105 aa2□□□□□ -2.09
CDC5YMR001C YKR041WP36134 250 aa1.99□□□□□ -2.09
CDC5YMR001C TIR3P40552 269 aa1.99□□□□□ -2.09
CDC5YMR001C CIS3P47001 227 aa1.99□□□□□ -2.09
CDC5YMR001C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
CDC5YMR001C TSC3Q3E790 80 aa1.99□□□□□ -2.09
CDC5YMR001C IKI3Q06706 1349 aaKnown RBP1.99□□□□□ -2.09
CDC5YMR001C YHR022CP38763 256 aa1.99□□□□□ -2.09
CDC5YMR001C MAG1P22134 296 aaKnown RBP1.98□□□□□ -2.09
CDC5YMR001C MPC3P53311 146 aa1.98□□□□□ -2.09
CDC5YMR001C YNL184CP53876 108 aa1.98□□□□□ -2.09
CDC5YMR001C CPA1P07258 411 aaKnown RBP1.97□□□□□ -2.09
CDC5YMR001C OCH1P31755 480 aa1.97□□□□□ -2.09
CDC5YMR001C HMF1P40037 129 aaKnown RBP1.97□□□□□ -2.09
CDC5YMR001C AYR1P40471 297 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms