RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W QRI5P32344 111 aa1.1□□□□□ -2.23
CTK3YML112W ERG24P32462 438 aaKnown RBP1.1□□□□□ -2.23
CTK3YML112W VPS21P36017 210 aaKnown RBP1.1□□□□□ -2.23
CTK3YML112W POP7P38291 140 aa1.1□□□□□ -2.23
CTK3YML112W DER1P38307 211 aa1.1□□□□□ -2.23
CTK3YML112W GOS1P38736 223 aa1.1□□□□□ -2.23
CTK3YML112W YHR022CP38763 256 aa1.1□□□□□ -2.23
CTK3YML112W CYC2P38909 366 aa1.1□□□□□ -2.23
CTK3YML112W GIM4P40005 111 aaKnown RBP1.1□□□□□ -2.23
CTK3YML112W LSM1P47017 172 aaKnown RBP1.1□□□□□ -2.23
CTK3YML112W RPC17P47076 161 aa1.1□□□□□ -2.23
CTK3YML112W YJR149WP47177 404 aa1.1□□□□□ -2.23
CTK3YML112W SBH2P52871 88 aa1.1□□□□□ -2.23
CTK3YML112W GET1P53192 235 aa1.1□□□□□ -2.23
CTK3YML112W GTR2P53290 341 aa1.1□□□□□ -2.23
CTK3YML112W MRPL50P53724 139 aa1.1□□□□□ -2.23
CTK3YML112W YNL140CP53910 189 aa1.1□□□□□ -2.23
CTK3YML112W YLR460CP54007 376 aa1.1□□□□□ -2.23
CTK3YML112W BUD25P85052 153 aa1.1□□□□□ -2.23
CTK3YML112W SPC24Q04477 213 aa1.1□□□□□ -2.23
CTK3YML112W YPR098CQ06089 161 aa1.1□□□□□ -2.23
CTK3YML112W YLR036CQ07986 203 aa1.1□□□□□ -2.23
CTK3YML112W YPL257WQ08974 193 aa1.1□□□□□ -2.23
CTK3YML112W SWI1P09547 1314 aa1.1□□□□□ -2.23
CTK3YML112W RAS2P01120 322 aaKnown RBP1.09□□□□□ -2.23
CTK3YML112W RPL28P02406 149 aaKnown RBP1.09□□□□□ -2.23
CTK3YML112W RPS28BP0C0X0 67 aaKnown RBP1.09□□□□□ -2.23
CTK3YML112W CDC10P25342 322 aaKnown RBP1.09□□□□□ -2.23
CTK3YML112W OAC1P32332 324 aa1.09□□□□□ -2.23
CTK3YML112W NTF2P33331 125 aaKnown RBP1.09□□□□□ -2.23
CTK3YML112W CLG1P35190 452 aa1.09□□□□□ -2.23
CTK3YML112W IKI1P38874 309 aa1.09□□□□□ -2.23
CTK3YML112W SMB1P40018 196 aaKnown RBP1.09□□□□□ -2.23
CTK3YML112W YER076CP40049 302 aa1.09□□□□□ -2.23
CTK3YML112W YER137CP40083 148 aaKnown RBP1.09□□□□□ -2.23
CTK3YML112W TMA22P47089 198 aaPredicted RBP1.09□□□□□ -2.23
CTK3YML112W YJR079WP47126 109 aa1.09□□□□□ -2.23
CTK3YML112W TRM9P49957 279 aa1.09□□□□□ -2.23
CTK3YML112W MGA1P53050 456 aa1.09□□□□□ -2.23
CTK3YML112W YGL204CP53089 101 aa1.09□□□□□ -2.23
CTK3YML112W NQM1P53228 333 aaPredicted RBP1.09□□□□□ -2.23
CTK3YML112W ERV29P53337 310 aa1.09□□□□□ -2.23
CTK3YML112W RCF2P53721 224 aa1.09□□□□□ -2.23
CTK3YML112W GRX8Q05926 109 aa1.09□□□□□ -2.23
CTK3YML112W RPS28AQ3E7X9 67 aaPredicted RBP1.09□□□□□ -2.23
CTK3YML112W IPP1P00817 287 aaKnown RBP1.08□□□□□ -2.24
CTK3YML112W PET54P10834 293 aa1.08□□□□□ -2.24
CTK3YML112W DBF2P22204 572 aa1.08□□□□□ -2.24
CTK3YML112W YCR023CP25351 611 aa1.08□□□□□ -2.24
CTK3YML112W UBC8P28263 218 aa1.08□□□□□ -2.24
CTK3YML112W SSO1P32867 290 aa1.08□□□□□ -2.24
CTK3YML112W NUF2P33895 451 aa1.08□□□□□ -2.24
CTK3YML112W PRX1P34227 261 aaKnown RBP1.08□□□□□ -2.24
CTK3YML112W JEN1P36035 616 aa1.08□□□□□ -2.24
CTK3YML112W SRP102P36057 244 aaPredicted RBP1.08□□□□□ -2.24
CTK3YML112W VPS51P36116 164 aa1.08□□□□□ -2.24
CTK3YML112W YKR041WP36134 250 aa1.08□□□□□ -2.24
CTK3YML112W MSA2P36157 363 aa1.08□□□□□ -2.24
CTK3YML112W FES1P38260 290 aa1.08□□□□□ -2.24
CTK3YML112W YAP3P38749 330 aa1.08□□□□□ -2.24
CTK3YML112W TRM5P38793 499 aa1.08□□□□□ -2.24
CTK3YML112W YGR201CP42936 225 aa1.08□□□□□ -2.24
CTK3YML112W YFH7P43591 353 aa1.08□□□□□ -2.24
CTK3YML112W YGR042WP53227 271 aa1.08□□□□□ -2.24
CTK3YML112W YPR127WQ06494 345 aa1.08□□□□□ -2.24
CTK3YML112W RRS1Q08746 203 aaKnown RBP1.08□□□□□ -2.24
CTK3YML112W CSM4Q08955 156 aa1.08□□□□□ -2.24
CTK3YML112W TPO4Q12256 659 aa1.08□□□□□ -2.24
CTK3YML112W YLR126CQ12288 251 aa1.08□□□□□ -2.24
CTK3YML112W JLP1Q12358 412 aa1.08□□□□□ -2.24
CTK3YML112W SNU23Q12368 194 aaPredicted RBP1.08□□□□□ -2.24
CTK3YML112W LSO2Q3E772 92 aaKnown RBP1.08□□□□□ -2.24
CTK3YML112W RIB3Q99258 208 aa1.08□□□□□ -2.24
CTK3YML112W RAD50P12753 1312 aa1.08□□□□□ -2.24
CTK3YML112W TOP2P06786 1428 aaKnown RBP1.07□□□□□ -2.24
CTK3YML112W COX5AP00424 153 aa1.07□□□□□ -2.24
CTK3YML112W URA6P15700 204 aa1.07□□□□□ -2.24
CTK3YML112W YGL010WP25338 174 aa1.07□□□□□ -2.24
CTK3YML112W TCA17P32613 152 aa1.07□□□□□ -2.24
CTK3YML112W SFK1P35735 353 aa1.07□□□□□ -2.24
CTK3YML112W CAF4P36130 643 aa1.07□□□□□ -2.24
CTK3YML112W MRX3P38172 270 aa1.07□□□□□ -2.24
CTK3YML112W YBR219CP38317 127 aa1.07□□□□□ -2.24
CTK3YML112W SLM6P38343 150 aa1.07□□□□□ -2.24
CTK3YML112W VMA22P38784 181 aa1.07□□□□□ -2.24
CTK3YML112W YAR068WP39564 161 aa1.07□□□□□ -2.24
CTK3YML112W AVT2P39981 480 aa1.07□□□□□ -2.24
CTK3YML112W FMP32P43557 207 aa1.07□□□□□ -2.24
CTK3YML112W APS3P47064 194 aa1.07□□□□□ -2.24
CTK3YML112W MMS2P53152 137 aa1.07□□□□□ -2.24
CTK3YML112W NRK1P53915 240 aa1.07□□□□□ -2.24
CTK3YML112W KRE28Q04431 385 aa1.07□□□□□ -2.24
CTK3YML112W SPG4Q04438 115 aa1.07□□□□□ -2.24
CTK3YML112W NEJ1Q06148 342 aa1.07□□□□□ -2.24
CTK3YML112W ATG39Q06159 398 aa1.07□□□□□ -2.24
CTK3YML112W NOC4Q06512 552 aaPredicted RBP1.07□□□□□ -2.24
CTK3YML112W YLR030WQ07967 263 aa1.07□□□□□ -2.24
CTK3YML112W YOR289WQ12012 251 aaPredicted RBP1.07□□□□□ -2.24
CTK3YML112W YLR361C-AQ3E795 98 aa1.07□□□□□ -2.24
CTK3YML112W RPO41P13433 1351 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 96.2 ms