RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C RAD28Q12021 506 aa3.87□□□□□ -1.79
CDC42YLR229C ATX2Q12067 313 aa3.87□□□□□ -1.79
CDC42YLR229C MCP1Q12106 302 aa3.87□□□□□ -1.79
CDC42YLR229C YLR118CQ12354 227 aa3.87□□□□□ -1.79
CDC42YLR229C YER175W-AQ8TGU4 54 aa3.87□□□□□ -1.79
CDC42YLR229C ATP5P09457 212 aa3.86□□□□□ -1.79
CDC42YLR229C PAU19P0CE85 124 aa3.86□□□□□ -1.79
CDC42YLR229C PAU21P0CE86 164 aa3.86□□□□□ -1.79
CDC42YLR229C PAU22P0CE87 164 aa3.86□□□□□ -1.79
CDC42YLR229C NUP1P20676 1076 aa3.86□□□□□ -1.79
CDC42YLR229C MAK32P23060 363 aa3.86□□□□□ -1.79
CDC42YLR229C YCR006CP25350 157 aa3.86□□□□□ -1.79
CDC42YLR229C PAU3P25610 124 aa3.86□□□□□ -1.79
CDC42YLR229C RFA3P26755 122 aaKnown RBP3.86□□□□□ -1.79
CDC42YLR229C FAA1P30624 700 aaKnown RBP3.86□□□□□ -1.79
CDC42YLR229C ERG3P32353 365 aa3.86□□□□□ -1.79
CDC42YLR229C MDH3P32419 343 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
CDC42YLR229C FMT1P32785 401 aa3.86□□□□□ -1.79
CDC42YLR229C MSN4P33749 630 aa3.86□□□□□ -1.79
CDC42YLR229C WSS1P38838 269 aa3.86□□□□□ -1.79
CDC42YLR229C HSP10P38910 106 aa3.86□□□□□ -1.79
CDC42YLR229C UME6P39001 836 aa3.86□□□□□ -1.79
CDC42YLR229C UIP3P39547 235 aa3.86□□□□□ -1.79
CDC42YLR229C YEA4P40004 342 aa3.86□□□□□ -1.79
CDC42YLR229C YIL067CP40514 678 aa3.86□□□□□ -1.79
CDC42YLR229C IKS1P47042 667 aa3.86□□□□□ -1.79
CDC42YLR229C BXI1P48558 297 aa3.86□□□□□ -1.79
CDC42YLR229C YGL114WP53134 725 aa3.86□□□□□ -1.79
CDC42YLR229C RMD9P53140 646 aaKnown RBP3.86□□□□□ -1.79
CDC42YLR229C MPP6P53725 186 aaPredicted RBP3.86□□□□□ -1.79
CDC42YLR229C YLR152CP54072 576 aa3.86□□□□□ -1.79
CDC42YLR229C RSM23Q01163 450 aa3.86□□□□□ -1.79
CDC42YLR229C YDR248CQ03786 193 aa3.86□□□□□ -1.79
CDC42YLR229C YDR387CQ04162 555 aa3.86□□□□□ -1.79
CDC42YLR229C DPB4Q04603 196 aaKnown RBP3.86□□□□□ -1.79
CDC42YLR229C YMR253CQ04835 414 aa3.86□□□□□ -1.79
CDC42YLR229C MRX8Q05473 314 aa3.86□□□□□ -1.79
CDC42YLR229C MHR1Q06630 226 aa3.86□□□□□ -1.79
CDC42YLR229C RRT7Q07829 113 aa3.86□□□□□ -1.79
CDC42YLR229C COQ10Q08058 207 aa3.86□□□□□ -1.79
CDC42YLR229C REX3Q12090 404 aa3.86□□□□□ -1.79
CDC42YLR229C YCT1Q12235 531 aa3.86□□□□□ -1.79
CDC42YLR229C SET6Q12529 373 aa3.86□□□□□ -1.79
CDC42YLR229C YDL085C-AQ3E7B7 68 aaKnown RBP3.86□□□□□ -1.79
CDC42YLR229C QCR2P07257 368 aa3.85□□□□□ -1.79
CDC42YLR229C HNM1P19807 563 aa3.85□□□□□ -1.79
CDC42YLR229C ATG15P25641 520 aa3.85□□□□□ -1.79
CDC42YLR229C EHD3P28817 500 aa3.85□□□□□ -1.79
CDC42YLR229C UTH1P36135 365 aa3.85□□□□□ -1.79
CDC42YLR229C MRPL11P36521 249 aaPredicted RBP3.85□□□□□ -1.79
CDC42YLR229C MRPL28P36527 147 aa3.85□□□□□ -1.79
CDC42YLR229C YEA6P39953 335 aa3.85□□□□□ -1.79
CDC42YLR229C YNL208WP40159 199 aaKnown RBP3.85□□□□□ -1.79
CDC42YLR229C SMD3P43321 101 aaKnown RBP3.85□□□□□ -1.79
CDC42YLR229C MOB2P43563 287 aa3.85□□□□□ -1.79
CDC42YLR229C AVT4P50944 713 aa3.85□□□□□ -1.79
CDC42YLR229C ALG9P53868 555 aaKnown RBP3.85□□□□□ -1.79
CDC42YLR229C RHO5P53879 331 aaKnown RBP3.85□□□□□ -1.79
CDC42YLR229C SAE3P89114 91 aa3.85□□□□□ -1.79
CDC42YLR229C CYT2Q00873 224 aa3.85□□□□□ -1.79
CDC42YLR229C CWC27Q02770 301 aa3.85□□□□□ -1.79
CDC42YLR229C MRP51Q02950 344 aa3.85□□□□□ -1.79
CDC42YLR229C EST3Q03096 181 aa3.85□□□□□ -1.79
CDC42YLR229C EKI1Q03764 534 aa3.85□□□□□ -1.79
CDC42YLR229C ATC1Q04005 294 aa3.85□□□□□ -1.79
CDC42YLR229C GMC1Q04399 608 aa3.85□□□□□ -1.79
CDC42YLR229C MRPL1Q04599 285 aa3.85□□□□□ -1.79
CDC42YLR229C PAL1Q05518 499 aaKnown RBP3.85□□□□□ -1.79
CDC42YLR229C NMA1Q06178 401 aaKnown RBP3.85□□□□□ -1.79
CDC42YLR229C SYM1Q06563 197 aa3.85□□□□□ -1.79
CDC42YLR229C HRT1Q08273 121 aa3.85□□□□□ -1.79
CDC42YLR229C RLM1Q12224 676 aa3.85□□□□□ -1.79
CDC42YLR229C ORT1Q12375 292 aa3.85□□□□□ -1.79
CDC42YLR229C SGA1P08019 549 aa3.84□□□□□ -1.79
CDC42YLR229C RPL31AP0C2H8 113 aaKnown RBP3.84□□□□□ -1.79
CDC42YLR229C RPL31BP0C2H9 113 aaKnown RBP3.84□□□□□ -1.79
CDC42YLR229C ARF1P11076 181 aaKnown RBP3.84□□□□□ -1.79
CDC42YLR229C OLE1P21147 510 aaKnown RBP3.84□□□□□ -1.79
CDC42YLR229C KRR1P25586 316 aaPredicted RBP3.84□□□□□ -1.79
CDC42YLR229C PAD1P33751 242 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
CDC42YLR229C SEF1P34228 1148 aa3.84□□□□□ -1.79
CDC42YLR229C UBS1P38290 277 aa3.84□□□□□ -1.79
CDC42YLR229C SSH1P38353 490 aaKnown RBP3.84□□□□□ -1.79
CDC42YLR229C CUE1P38428 203 aa3.84□□□□□ -1.79
CDC42YLR229C YHR180WP38868 163 aa3.84□□□□□ -1.79
CDC42YLR229C YIL060WP40519 144 aa3.84□□□□□ -1.79
CDC42YLR229C PHS1P40857 217 aa3.84□□□□□ -1.79
CDC42YLR229C UBP8P50102 471 aa3.84□□□□□ -1.79
CDC42YLR229C ERG25P53045 309 aa3.84□□□□□ -1.79
CDC42YLR229C THI74Q04083 370 aa3.84□□□□□ -1.79
CDC42YLR229C NDE2Q07500 545 aa3.84□□□□□ -1.79
CDC42YLR229C FCY22Q12119 530 aa3.84□□□□□ -1.79
CDC42YLR229C PRP46Q12417 451 aaPredicted RBP3.84□□□□□ -1.79
CDC42YLR229C IZH2Q12442 317 aa3.84□□□□□ -1.79
CDC42YLR229C ERG27Q12452 347 aaKnown RBP3.84□□□□□ -1.79
CDC42YLR229C PAR32Q12515 295 aaKnown RBP3.84□□□□□ -1.79
CDC42YLR229C TAD3Q9URQ3 322 aa3.84□□□□□ -1.79
CDC42YLR229C BEM2P39960 2167 aaKnown RBP3.83□□□□□ -1.8
CDC42YLR229C MSW1P04803 379 aa3.83□□□□□ -1.8
CDC42YLR229C GDH1P07262 454 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms