RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeast

Gene PBA1, Length 831 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBA1	YLR199C	ICE2	P40499	491 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	YFH7	P43591	353 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	IGD1	P43598	195 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	AIM25	P47140	327 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	SBH2	P52871	88 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	NUP49	Q02199	472 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	ABF2	Q02486	183 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	API2	Q04413	109 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	PAL1	Q05518	499 aa	Known RBP	2.75	□□□□□ -1.97
PBA1	YLR199C	YOL024W	Q08172	172 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	NSL1	Q12143	216 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	MDM32	Q12171	622 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.75	□□□□□ -1.97
PBA1	YLR199C	YDR034W-B	Q6Q5X2	51 aa		2.75	□□□□□ -1.97
PBA1	YLR199C	ROM2	P51862	1356 aa	Known RBP	2.74	□□□□□ -1.97
PBA1	YLR199C	SWI1	P09547	1314 aa		2.74	□□□□□ -1.97
PBA1	YLR199C	SEC4	P07560	215 aa	Known RBP	2.74	□□□□□ -1.97
PBA1	YLR199C	CUP2	P15315	225 aa		2.74	□□□□□ -1.97
PBA1	YLR199C	GRX2	P17695	143 aa	Known RBP	2.74	□□□□□ -1.97
PBA1	YLR199C	ZRT3	P34240	503 aa		2.74	□□□□□ -1.97
PBA1	YLR199C	CSG2	P35206	410 aa		2.74	□□□□□ -1.97
PBA1	YLR199C	EDC2	P40023	145 aa	Predicted RBP	2.74	□□□□□ -1.97
PBA1	YLR199C	AVT6	P40074	448 aa		2.74	□□□□□ -1.97
PBA1	YLR199C	SOK1	P40317	901 aa		2.74	□□□□□ -1.97
PBA1	YLR199C	ERV29	P53337	310 aa		2.74	□□□□□ -1.97
PBA1	YLR199C	SWT21	P53873	357 aa	Predicted RBP	2.74	□□□□□ -1.97
PBA1	YLR199C	VHS1	Q03785	461 aa		2.74	□□□□□ -1.97
PBA1	YLR199C	YBR298C-A	Q8TGK4	73 aa		2.74	□□□□□ -1.97
PBA1	YLR199C	ISY1	P21374	235 aa	Predicted RBP	2.73	□□□□□ -1.97
PBA1	YLR199C	SSH1	P38353	490 aa	Known RBP	2.73	□□□□□ -1.97
PBA1	YLR199C	EDC3	P39998	551 aa	Known RBP	2.73	□□□□□ -1.97
PBA1	YLR199C	CAT5	P41735	233 aa		2.73	□□□□□ -1.97
PBA1	YLR199C	ILM1	P47155	203 aa		2.73	□□□□□ -1.97
PBA1	YLR199C	YGL262W	P53054	175 aa		2.73	□□□□□ -1.97
PBA1	YLR199C	NQM1	P53228	333 aa	Predicted RBP	2.73	□□□□□ -1.97
PBA1	YLR199C	LSM7	P53905	115 aa	Known RBP	2.73	□□□□□ -1.97
PBA1	YLR199C	GGA1	Q06336	557 aa		2.73	□□□□□ -1.97
PBA1	YLR199C	YLR053C	Q12026	108 aa		2.73	□□□□□ -1.97
PBA1	YLR199C	YPR011C	Q12251	326 aa		2.73	□□□□□ -1.97
PBA1	YLR199C	YPS3	Q12303	508 aa		2.73	□□□□□ -1.97
PBA1	YLR199C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.73	□□□□□ -1.97
PBA1	YLR199C	GCN1	P33892	2672 aa	Known RBP	2.73	□□□□□ -1.97
PBA1	YLR199C	IPP1	P00817	287 aa	Known RBP	2.72	□□□□□ -1.97
PBA1	YLR199C	BMH1	P29311	267 aa	Known RBP	2.72	□□□□□ -1.97
PBA1	YLR199C	SMP1	P38128	452 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	SPL2	P38839	148 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	PRM10	P42946	383 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	RPE1	P46969	238 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	UBC12	P52491	188 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	YGL118C	P53132	145 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	PRM8	P53174	237 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	YNL184C	P53876	108 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	ACT1	P60010	375 aa	Known RBP	2.72	□□□□□ -1.97
PBA1	YLR199C	YPL039W	Q03080	316 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	YLR179C	Q06252	201 aa	Known RBP	2.72	□□□□□ -1.97
PBA1	YLR199C	YLR030W	Q07967	263 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	YOL029C	Q08187	201 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	YOL160W	Q08321	113 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	EMP46	Q12396	444 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	LSO2	Q3E772	92 aa	Known RBP	2.72	□□□□□ -1.97
PBA1	YLR199C	YHR214C-E	Q8TGK0	99 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	FKS3	Q04952	1785 aa		2.72	□□□□□ -1.97
PBA1	YLR199C	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.71	□□□□□ -1.97
PBA1	YLR199C	EPT1	P22140	391 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	ARO7	P32178	256 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	TCA17	P32613	152 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	PTM1	P32857	523 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	YBL081W	P38180	368 aa	Known RBP	2.71	□□□□□ -1.98
PBA1	YLR199C	KRE9	P39005	276 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	SYS1	P41544	203 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	MIC19	P43594	170 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	YJL028W	P47062	111 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	FLC3	P53121	802 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	YML108W	Q03759	105 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	EMI1	Q04406	187 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	YMR317W	Q04893	1140 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	NNT1	Q05874	261 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	RRG7	Q08774	242 aa	Predicted RBP	2.71	□□□□□ -1.98
PBA1	YLR199C	TIM22	Q12328	207 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	ATG5	Q12380	294 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	RDI1	Q12434	202 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	PEX11	Q12462	236 aa		2.71	□□□□□ -1.98
PBA1	YLR199C	DFM1	Q12743	341 aa	Known RBP	2.71	□□□□□ -1.98
PBA1	YLR199C	RPL25	P04456	142 aa	Known RBP	2.7	□□□□□ -1.98
PBA1	YLR199C	CMD1	P06787	147 aa	Known RBP	2.7	□□□□□ -1.98
PBA1	YLR199C	SEC22	P22214	214 aa		2.7	□□□□□ -1.98
PBA1	YLR199C	YCR090C	P25654	182 aa	Known RBP	2.7	□□□□□ -1.98
PBA1	YLR199C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
PBA1	YLR199C	NUF2	P33895	451 aa		2.7	□□□□□ -1.98
PBA1	YLR199C	DOG1	P38774	246 aa		2.7	□□□□□ -1.98
PBA1	YLR199C	NVJ1	P38881	321 aa		2.7	□□□□□ -1.98
PBA1	YLR199C	ASP1	P38986	381 aa	Predicted RBP	2.7	□□□□□ -1.98
PBA1	YLR199C	GIM4	P40005	111 aa	Known RBP	2.7	□□□□□ -1.98
PBA1	YLR199C	RRT13	P40042	185 aa		2.7	□□□□□ -1.98
PBA1	YLR199C	LSM4	P40070	187 aa	Known RBP	2.7	□□□□□ -1.98
PBA1	YLR199C	YER189W	P40104	122 aa		2.7	□□□□□ -1.98
PBA1	YLR199C	COQ5	P49017	307 aa		2.7	□□□□□ -1.98
PBA1	YLR199C	COS6	P53344	381 aa		2.7	□□□□□ -1.98
PBA1	YLR199C	DYN3	Q04949	312 aa		2.7	□□□□□ -1.98
PBA1	YLR199C	ECM19	Q06011	112 aa		2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms