RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W NSA2P40078 261 aaKnown RBP5.61□□□□□ -1.51
GEF1YJR040W YJR011CP47086 261 aaPredicted RBP5.61□□□□□ -1.51
GEF1YJR040W YGL262WP53054 175 aa5.61□□□□□ -1.51
GEF1YJR040W UPS3Q04006 179 aa5.61□□□□□ -1.51
GEF1YJR040W ERP1Q05359 219 aaKnown RBP5.61□□□□□ -1.51
GEF1YJR040W RTT103Q05543 409 aa5.61□□□□□ -1.51
GEF1YJR040W YPL257WQ08974 193 aa5.61□□□□□ -1.51
GEF1YJR040W YOR015WQ12169 119 aa5.61□□□□□ -1.51
GEF1YJR040W HAA1Q12753 694 aaKnown RBP5.61□□□□□ -1.51
GEF1YJR040W COX1P00401 534 aa5.6□□□□□ -1.51
GEF1YJR040W DDI2P0CH63 225 aa5.6□□□□□ -1.51
GEF1YJR040W DDI3P0CH64 225 aa5.6□□□□□ -1.51
GEF1YJR040W ELO2P25358 347 aa5.6□□□□□ -1.51
GEF1YJR040W LSB5P25369 354 aa5.6□□□□□ -1.51
GEF1YJR040W ALK2P32789 676 aaPredicted RBP5.6□□□□□ -1.51
GEF1YJR040W VBA2P38358 474 aaKnown RBP5.6□□□□□ -1.51
GEF1YJR040W DLS1P40366 167 aa5.6□□□□□ -1.51
GEF1YJR040W BXI1P48558 297 aa5.6□□□□□ -1.51
GEF1YJR040W NIF3P53081 288 aa5.6□□□□□ -1.51
GEF1YJR040W LCL3P53153 274 aa5.6□□□□□ -1.51
GEF1YJR040W YNR066CP53752 436 aa5.6□□□□□ -1.51
GEF1YJR040W WTM2Q12206 467 aa5.6□□□□□ -1.51
GEF1YJR040W YOP1Q12402 180 aa5.6□□□□□ -1.51
GEF1YJR040W LAS17Q12446 633 aa5.6□□□□□ -1.51
GEF1YJR040W YIL046W-AQ3E7Z4 54 aa5.6□□□□□ -1.51
GEF1YJR040W STE18P18852 110 aa5.6□□□□□ -1.51
GEF1YJR040W SUA7P29055 345 aaPredicted RBP5.6□□□□□ -1.51
GEF1YJR040W GLC7P32598 312 aaKnown RBP5.6□□□□□ -1.51
GEF1YJR040W MRPS9P38120 278 aa5.6□□□□□ -1.51
GEF1YJR040W BDH1P39714 382 aa5.6□□□□□ -1.51
GEF1YJR040W AVT7P40501 490 aa5.6□□□□□ -1.51
GEF1YJR040W YLR460CP54007 376 aa5.6□□□□□ -1.51
GEF1YJR040W CGI121Q03705 181 aaKnown RBP5.6□□□□□ -1.51
GEF1YJR040W YAP6Q03935 383 aa5.6□□□□□ -1.51
GEF1YJR040W ILV5P06168 395 aaKnown RBP5.59□□□□□ -1.51
GEF1YJR040W RPL20AP0CX23 172 aaKnown RBP5.59□□□□□ -1.51
GEF1YJR040W RPL20BP0CX24 172 aaPredicted RBP5.59□□□□□ -1.51
GEF1YJR040W BGL2P15703 313 aaKnown RBP5.59□□□□□ -1.51
GEF1YJR040W MXR2P25566 168 aa5.59□□□□□ -1.51
GEF1YJR040W STP22P25604 385 aa5.59□□□□□ -1.51
GEF1YJR040W UPS2P35200 230 aa5.59□□□□□ -1.51
GEF1YJR040W MRPL27P36526 146 aaPredicted RBP5.59□□□□□ -1.51
GEF1YJR040W YBR197CP38306 217 aa5.59□□□□□ -1.51
GEF1YJR040W ARC40P38328 384 aaKnown RBP5.59□□□□□ -1.51
GEF1YJR040W TRS20P38334 175 aa5.59□□□□□ -1.51
GEF1YJR040W CUE1P38428 203 aa5.59□□□□□ -1.51
GEF1YJR040W TAF4P50105 388 aa5.59□□□□□ -1.51
GEF1YJR040W RMD9P53140 646 aaKnown RBP5.59□□□□□ -1.51
GEF1YJR040W AGE1Q04412 482 aa5.59□□□□□ -1.51
GEF1YJR040W MRX8Q05473 314 aa5.59□□□□□ -1.51
GEF1YJR040W MRL1Q06815 381 aa5.59□□□□□ -1.51
GEF1YJR040W YSF3P0C074 85 aaPredicted RBP5.59□□□□□ -1.51
GEF1YJR040W YKL071WP36086 256 aa5.59□□□□□ -1.51
GEF1YJR040W PAU5P43575 122 aa5.59□□□□□ -1.51
GEF1YJR040W IKS1P47042 667 aa5.59□□□□□ -1.51
GEF1YJR040W BRR6P53062 197 aa5.59□□□□□ -1.51
GEF1YJR040W YML018CQ03730 393 aa5.59□□□□□ -1.51
GEF1YJR040W YOL073CQ08232 322 aa5.59□□□□□ -1.51
GEF1YJR040W SWM1Q12379 170 aa5.59□□□□□ -1.51
GEF1YJR040W POL2P21951 2222 aaKnown RBP5.59□□□□□ -1.52
GEF1YJR040W CHO1P08456 276 aa5.58□□□□□ -1.52
GEF1YJR040W PAC1P39946 494 aaKnown RBP5.58□□□□□ -1.52
GEF1YJR040W IRC22P40006 225 aa5.58□□□□□ -1.52
GEF1YJR040W YNL208WP40159 199 aaKnown RBP5.58□□□□□ -1.52
GEF1YJR040W AIR1P40507 360 aaKnown RBP5.58□□□□□ -1.52
GEF1YJR040W PHS1P40857 217 aa5.58□□□□□ -1.52
GEF1YJR040W SSU72P53538 206 aaPredicted RBP5.58□□□□□ -1.52
GEF1YJR040W NCE101Q02820 53 aa5.58□□□□□ -1.52
GEF1YJR040W NRG1Q03125 231 aa5.58□□□□□ -1.52
GEF1YJR040W COQ10Q08058 207 aa5.58□□□□□ -1.52
GEF1YJR040W SRL2Q12020 392 aa5.58□□□□□ -1.52
GEF1YJR040W PET20Q99373 253 aa5.58□□□□□ -1.52
GEF1YJR040W FMT1P32785 401 aa5.58□□□□□ -1.52
GEF1YJR040W FLO5P38894 1075 aa5.58□□□□□ -1.52
GEF1YJR040W SHR5P41912 237 aa5.58□□□□□ -1.52
GEF1YJR040W CPR1P14832 162 aaKnown RBP5.57□□□□□ -1.52
GEF1YJR040W RPB8P20436 146 aa5.57□□□□□ -1.52
GEF1YJR040W MRS4P23500 304 aa5.57□□□□□ -1.52
GEF1YJR040W PAD1P33751 242 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
GEF1YJR040W RPL14AP36105 138 aaKnown RBP5.57□□□□□ -1.52
GEF1YJR040W RPL14BP38754 138 aaKnown RBP5.57□□□□□ -1.52
GEF1YJR040W YDR248CQ03786 193 aa5.57□□□□□ -1.52
GEF1YJR040W ASM4Q05166 528 aa5.57□□□□□ -1.52
GEF1YJR040W RDL1Q12305 139 aaKnown RBP5.57□□□□□ -1.52
GEF1YJR040W IZH2Q12442 317 aa5.57□□□□□ -1.52
GEF1YJR040W RAX2Q12465 1220 aa5.57□□□□□ -1.52
GEF1YJR040W YKL069WP36088 180 aa5.57□□□□□ -1.52
GEF1YJR040W PRY2P36110 329 aa5.57□□□□□ -1.52
GEF1YJR040W YEA6P39953 335 aa5.57□□□□□ -1.52
GEF1YJR040W PMT3P47190 753 aa5.57□□□□□ -1.52
GEF1YJR040W ACS2P52910 683 aaKnown RBP5.57□□□□□ -1.52
GEF1YJR040W YGR066CP53242 292 aa5.57□□□□□ -1.52
GEF1YJR040W RHO5P53879 331 aaKnown RBP5.57□□□□□ -1.52
GEF1YJR040W SAM50P53969 484 aa5.57□□□□□ -1.52
GEF1YJR040W YLR152CP54072 576 aa5.57□□□□□ -1.52
GEF1YJR040W DIG2Q03373 323 aaKnown RBP5.57□□□□□ -1.52
GEF1YJR040W HNT1Q04344 158 aaKnown RBP5.57□□□□□ -1.52
GEF1YJR040W FRE7Q12333 620 aa5.57□□□□□ -1.52
GEF1YJR040W YPT1P01123 206 aaKnown RBP5.56□□□□□ -1.52
GEF1YJR040W YPR170W-BP0C5R9 85 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms