RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W YEL075CP39972 122 aa1.52□□□□□ -2.17
SEC28YIL076W AVT2P39981 480 aa1.52□□□□□ -2.17
SEC28YIL076W YER189WP40104 122 aa1.52□□□□□ -2.17
SEC28YIL076W CWC21Q03375 135 aaKnown RBP1.52□□□□□ -2.17
SEC28YIL076W YPR147CQ06522 304 aaKnown RBP1.52□□□□□ -2.17
SEC28YIL076W CYR1P08678 2026 aaKnown RBP1.51□□□□□ -2.17
SEC28YIL076W UBR1P19812 1950 aa1.51□□□□□ -2.17
SEC28YIL076W HIS1P00498 297 aaKnown RBP1.51□□□□□ -2.17
SEC28YIL076W PEX18P38855 283 aa1.51□□□□□ -2.17
SEC28YIL076W NUP84P52891 726 aa1.51□□□□□ -2.17
SEC28YIL076W GOT1Q03554 138 aa1.51□□□□□ -2.17
SEC28YIL076W ABP140Q08641 628 aaKnown RBP1.51□□□□□ -2.17
SEC28YIL076W YIL046W-AQ3E7Z4 54 aa1.51□□□□□ -2.17
SEC28YIL076W UTP20P35194 2493 aaKnown RBP1.51□□□□□ -2.17
SEC28YIL076W RPL22AP05749 121 aaKnown RBP1.5□□□□□ -2.17
SEC28YIL076W DDI2P0CH63 225 aa1.5□□□□□ -2.17
SEC28YIL076W DDI3P0CH64 225 aa1.5□□□□□ -2.17
SEC28YIL076W QRI5P32344 111 aa1.5□□□□□ -2.17
SEC28YIL076W YBR219CP38317 127 aa1.5□□□□□ -2.17
SEC28YIL076W MRH4P53166 561 aa1.5□□□□□ -2.17
SEC28YIL076W YGR219WP53307 113 aa1.5□□□□□ -2.17
SEC28YIL076W TIM8P57744 87 aa1.5□□□□□ -2.17
SEC28YIL076W MZM1Q03429 123 aaPredicted RBP1.5□□□□□ -2.17
SEC28YIL076W YLR030WQ07967 263 aa1.5□□□□□ -2.17
SEC28YIL076W YGL010WP25338 174 aa1.49□□□□□ -2.17
SEC28YIL076W VMA11P32842 164 aa1.49□□□□□ -2.17
SEC28YIL076W SGE1P33335 543 aa1.49□□□□□ -2.17
SEC28YIL076W PRX1P34227 261 aaKnown RBP1.49□□□□□ -2.17
SEC28YIL076W KAP114P53067 1004 aa1.49□□□□□ -2.17
SEC28YIL076W YGL159WP53110 370 aa1.49□□□□□ -2.17
SEC28YIL076W EGD1Q02642 157 aaKnown RBP1.49□□□□□ -2.17
SEC28YIL076W SNF8Q12483 233 aa1.49□□□□□ -2.17
SEC28YIL076W SSA3P09435 649 aaKnown RBP1.48□□□□□ -2.17
SEC28YIL076W OAC1P32332 324 aa1.48□□□□□ -2.17
SEC28YIL076W ERG24P32462 438 aaKnown RBP1.48□□□□□ -2.17
SEC28YIL076W RSM25P40496 264 aa1.48□□□□□ -2.17
SEC28YIL076W SPG3Q04398 127 aaPredicted RBP1.48□□□□□ -2.17
SEC28YIL076W FAR8Q05040 523 aa1.48□□□□□ -2.17
SEC28YIL076W ATG17Q06410 417 aa1.48□□□□□ -2.17
SEC28YIL076W SYC1Q08553 188 aaPredicted RBP1.48□□□□□ -2.17
SEC28YIL076W YLR046CQ12253 270 aa1.48□□□□□ -2.17
SEC28YIL076W DDP1Q99321 188 aaKnown RBP1.48□□□□□ -2.17
SEC28YIL076W YKR104WP0CE69 306 aa1.47□□□□□ -2.17
SEC28YIL076W ERV15P38312 142 aa1.47□□□□□ -2.17
SEC28YIL076W YBR220CP38318 560 aa1.47□□□□□ -2.17
SEC28YIL076W EDC3P39998 551 aaKnown RBP1.47□□□□□ -2.17
SEC28YIL076W HYR1P40581 163 aaKnown RBP1.47□□□□□ -2.17
SEC28YIL076W SNZ3P43545 298 aa1.47□□□□□ -2.17
SEC28YIL076W GLG2P47011 380 aa1.47□□□□□ -2.17
SEC28YIL076W PIR1Q03178 341 aa1.47□□□□□ -2.17
SEC28YIL076W PEX11Q12462 236 aa1.47□□□□□ -2.17
SEC28YIL076W JIP3O13555 125 aa1.46□□□□□ -2.18
SEC28YIL076W OM45P16547 393 aa1.46□□□□□ -2.18
SEC28YIL076W DAL80P26343 269 aa1.46□□□□□ -2.18
SEC28YIL076W EHD3P28817 500 aa1.46□□□□□ -2.18
SEC28YIL076W YKT6P36015 200 aaKnown RBP1.46□□□□□ -2.18
SEC28YIL076W YKE4P40544 346 aa1.46□□□□□ -2.18
SEC28YIL076W EMC4P53073 190 aa1.46□□□□□ -2.18
SEC28YIL076W HOP2P53187 214 aa1.46□□□□□ -2.18
SEC28YIL076W SNZ2P53824 298 aa1.46□□□□□ -2.18
SEC28YIL076W ARO80Q04052 950 aa1.46□□□□□ -2.18
SEC28YIL076W YML096WQ04489 525 aa1.46□□□□□ -2.18
SEC28YIL076W GRX8Q05926 109 aa1.46□□□□□ -2.18
SEC28YIL076W CSI2Q08054 341 aa1.46□□□□□ -2.18
SEC28YIL076W COQ10Q08058 207 aa1.46□□□□□ -2.18
SEC28YIL076W RRP40Q08285 240 aaKnown RBP1.46□□□□□ -2.18
SEC28YIL076W SEC16P48415 2195 aaKnown RBP1.46□□□□□ -2.18
SEC28YIL076W RPL9AP05738 191 aaKnown RBP1.45□□□□□ -2.18
SEC28YIL076W CDC33P07260 213 aaKnown RBP1.45□□□□□ -2.18
SEC28YIL076W DAL82P21705 255 aa1.45□□□□□ -2.18
SEC28YIL076W FZO1P38297 855 aa1.45□□□□□ -2.18
SEC28YIL076W URA8P38627 578 aaPredicted RBP1.45□□□□□ -2.18
SEC28YIL076W YJR079WP47126 109 aa1.45□□□□□ -2.18
SEC28YIL076W RPL9BP51401 191 aaKnown RBP1.45□□□□□ -2.18
SEC28YIL076W GTR2P53290 341 aa1.45□□□□□ -2.18
SEC28YIL076W KAP95Q06142 861 aaKnown RBP1.45□□□□□ -2.18
SEC28YIL076W NEJ1Q06148 342 aa1.45□□□□□ -2.18
SEC28YIL076W ATG10Q07879 167 aa1.45□□□□□ -2.18
SEC28YIL076W USB1Q12208 290 aaKnown RBP1.45□□□□□ -2.18
SEC28YIL076W FAS1P07149 2051 aaKnown RBP1.44□□□□□ -2.18
SEC28YIL076W YET1P35723 206 aa1.44□□□□□ -2.18
SEC28YIL076W JEN1P36035 616 aa1.44□□□□□ -2.18
SEC28YIL076W PRS2P38620 318 aaKnown RBP1.44□□□□□ -2.18
SEC28YIL076W SWC7Q06707 132 aa1.44□□□□□ -2.18
SEC28YIL076W OCA6Q12454 224 aa1.44□□□□□ -2.18
SEC28YIL076W STT4P37297 1900 aa1.43□□□□□ -2.18
SEC28YIL076W MSW1P04803 379 aa1.43□□□□□ -2.18
SEC28YIL076W MRPL37P36532 105 aa1.43□□□□□ -2.18
SEC28YIL076W YHR180WP38868 163 aa1.43□□□□□ -2.18
SEC28YIL076W AIM18P38884 321 aa1.43□□□□□ -2.18
SEC28YIL076W YEL028WP39989 153 aa1.43□□□□□ -2.18
SEC28YIL076W SMB1P40018 196 aaKnown RBP1.43□□□□□ -2.18
SEC28YIL076W BUD25P85052 153 aa1.43□□□□□ -2.18
SEC28YIL076W YPR114WQ06107 315 aa1.43□□□□□ -2.18
SEC28YIL076W COX2P00410 251 aa1.42□□□□□ -2.18
SEC28YIL076W IPP1P00817 287 aaKnown RBP1.42□□□□□ -2.18
SEC28YIL076W RPL43AP0CX25 92 aaKnown RBP1.42□□□□□ -2.18
SEC28YIL076W RPL43BP0CX26 92 aa1.42□□□□□ -2.18
SEC28YIL076W EBP2P36049 427 aaKnown RBP1.42□□□□□ -2.18
SEC28YIL076W THO1P40040 218 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 106.4 ms