RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C YCR007CP25354 239 aa2.79□□□□□ -1.96
RPN1YHR027C DCG1P32460 244 aa2.79□□□□□ -1.96
RPN1YHR027C PAU2P32612 120 aa2.79□□□□□ -1.96
RPN1YHR027C NNK1P36003 928 aa2.79□□□□□ -1.96
RPN1YHR027C TAE1P38340 232 aa2.79□□□□□ -1.96
RPN1YHR027C YHR130CP38834 111 aa2.79□□□□□ -1.96
RPN1YHR027C TAT2P38967 592 aa2.79□□□□□ -1.96
RPN1YHR027C YAL037WP39728 267 aa2.79□□□□□ -1.96
RPN1YHR027C JHD1P40034 492 aa2.79□□□□□ -1.96
RPN1YHR027C GTS1P40956 396 aa2.79□□□□□ -1.96
RPN1YHR027C VNX1P42839 908 aa2.79□□□□□ -1.96
RPN1YHR027C YJL028WP47062 111 aa2.79□□□□□ -1.96
RPN1YHR027C IRC15Q02733 499 aa2.79□□□□□ -1.96
RPN1YHR027C YMR166CQ03829 368 aa2.79□□□□□ -1.96
RPN1YHR027C YLR050CQ12155 161 aaKnown RBP2.79□□□□□ -1.96
RPN1YHR027C SRM1P21827 482 aa2.79□□□□□ -1.96
RPN1YHR027C SCO1P23833 295 aa2.79□□□□□ -1.96
RPN1YHR027C ZRT1P32804 376 aa2.79□□□□□ -1.96
RPN1YHR027C THI80P35202 319 aa2.79□□□□□ -1.96
RPN1YHR027C UMP1P38293 148 aa2.79□□□□□ -1.96
RPN1YHR027C TRR2P38816 342 aa2.79□□□□□ -1.96
RPN1YHR027C PEX7P39108 375 aa2.79□□□□□ -1.96
RPN1YHR027C ATF1P40353 525 aa2.79□□□□□ -1.96
RPN1YHR027C GPP1P41277 250 aaKnown RBP2.79□□□□□ -1.96
RPN1YHR027C TSA2Q04120 196 aa2.79□□□□□ -1.96
RPN1YHR027C YPR174CQ06616 221 aaPredicted RBP2.79□□□□□ -1.96
RPN1YHR027C TFB5Q3E7C1 72 aaPredicted RBP2.79□□□□□ -1.96
RPN1YHR027C COX1P00401 534 aa2.78□□□□□ -1.96
RPN1YHR027C VAR1P02381 398 aa2.78□□□□□ -1.96
RPN1YHR027C POR1P04840 283 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C SEC4P07560 215 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C SAC7P17121 654 aa2.78□□□□□ -1.96
RPN1YHR027C ARO4P32449 370 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C SKN1P33336 771 aa2.78□□□□□ -1.96
RPN1YHR027C MCR1P36060 302 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C SRP14P38985 146 aa2.78□□□□□ -1.96
RPN1YHR027C YIL165CP40446 119 aa2.78□□□□□ -1.96
RPN1YHR027C MEP2P41948 499 aa2.78□□□□□ -1.96
RPN1YHR027C ERJ5P43613 295 aaPredicted RBP2.78□□□□□ -1.96
RPN1YHR027C COQ5P49017 307 aa2.78□□□□□ -1.96
RPN1YHR027C LST7P53237 242 aa2.78□□□□□ -1.96
RPN1YHR027C HHT1P61830 136 aa2.78□□□□□ -1.96
RPN1YHR027C ATG21Q02887 496 aa2.78□□□□□ -1.96
RPN1YHR027C YML083CQ04526 418 aa2.78□□□□□ -1.96
RPN1YHR027C YPR114WQ06107 315 aa2.78□□□□□ -1.96
RPN1YHR027C ARR3Q06598 404 aa2.78□□□□□ -1.96
RPN1YHR027C STP4Q07351 490 aa2.78□□□□□ -1.96
RPN1YHR027C PFA4Q12006 378 aa2.78□□□□□ -1.96
RPN1YHR027C ORT1Q12375 292 aa2.78□□□□□ -1.96
RPN1YHR027C MRPL23Q12487 163 aaPredicted RBP2.78□□□□□ -1.96
RPN1YHR027C ADH1P00330 348 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C CDC43P18898 376 aa2.78□□□□□ -1.96
RPN1YHR027C TKL1P23254 680 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C ERG24P32462 438 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C KKQ8P36004 724 aa2.78□□□□□ -1.96
RPN1YHR027C MRPL24P36525 258 aaPredicted RBP2.78□□□□□ -1.96
RPN1YHR027C MRPL16P38064 232 aa2.78□□□□□ -1.96
RPN1YHR027C MRP21P38175 177 aa2.78□□□□□ -1.96
RPN1YHR027C SLM6P38343 150 aa2.78□□□□□ -1.96
RPN1YHR027C BAT1P38891 393 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C YND1P40009 630 aa2.78□□□□□ -1.96
RPN1YHR027C TTI2P47168 421 aa2.78□□□□□ -1.96
RPN1YHR027C ERG26P53199 349 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C DAD3P69850 94 aa2.78□□□□□ -1.96
RPN1YHR027C SKO1Q02100 647 aa2.78□□□□□ -1.96
RPN1YHR027C FRK1Q03002 865 aaPredicted RBP2.78□□□□□ -1.96
RPN1YHR027C LDS2Q08218 356 aa2.78□□□□□ -1.96
RPN1YHR027C MCP1Q12106 302 aa2.78□□□□□ -1.96
RPN1YHR027C YRA1Q12159 226 aaKnown RBP2.78□□□□□ -1.96
RPN1YHR027C MCT1Q12283 360 aa2.78□□□□□ -1.96
RPN1YHR027C RPS28BP0C0X0 67 aaKnown RBP2.77□□□□□ -1.97
RPN1YHR027C HVG1P0CE11 249 aa2.77□□□□□ -1.97
RPN1YHR027C GAS1P22146 559 aaKnown RBP2.77□□□□□ -1.97
RPN1YHR027C TRR1P29509 319 aaKnown RBP2.77□□□□□ -1.97
RPN1YHR027C GLN1P32288 370 aaKnown RBP2.77□□□□□ -1.97
RPN1YHR027C MSS51P32335 436 aa2.77□□□□□ -1.97
RPN1YHR027C RAD23P32628 398 aaKnown RBP2.77□□□□□ -1.97
RPN1YHR027C YKU70P32807 602 aa2.77□□□□□ -1.97
RPN1YHR027C MRPL27P36526 146 aaPredicted RBP2.77□□□□□ -1.97
RPN1YHR027C YER076CP40049 302 aa2.77□□□□□ -1.97
RPN1YHR027C MID1P41821 548 aa2.77□□□□□ -1.97
RPN1YHR027C UBX6P47049 396 aa2.77□□□□□ -1.97
RPN1YHR027C TIS11P47977 285 aa2.77□□□□□ -1.97
RPN1YHR027C YGL230CP53074 147 aa2.77□□□□□ -1.97
RPN1YHR027C PDR17P53844 350 aa2.77□□□□□ -1.97
RPN1YHR027C SUR7P54003 302 aa2.77□□□□□ -1.97
RPN1YHR027C INP1Q03694 420 aa2.77□□□□□ -1.97
RPN1YHR027C HNT1Q04344 158 aaKnown RBP2.77□□□□□ -1.97
RPN1YHR027C YDR344CQ05510 147 aa2.77□□□□□ -1.97
RPN1YHR027C RPS28AQ3E7X9 67 aaPredicted RBP2.77□□□□□ -1.97
RPN1YHR027C SOD2P00447 233 aa2.77□□□□□ -1.97
RPN1YHR027C MCK1P21965 375 aaKnown RBP2.77□□□□□ -1.97
RPN1YHR027C MAK32P23060 363 aa2.77□□□□□ -1.97
RPN1YHR027C PPA2P28239 310 aa2.77□□□□□ -1.97
RPN1YHR027C RPL14BP38754 138 aaKnown RBP2.77□□□□□ -1.97
RPN1YHR027C YER134CP40081 178 aa2.77□□□□□ -1.97
RPN1YHR027C YJR120WP47157 116 aa2.77□□□□□ -1.97
RPN1YHR027C SCS3P53012 380 aa2.77□□□□□ -1.97
RPN1YHR027C EMC4P53073 190 aa2.77□□□□□ -1.97
RPN1YHR027C YNL165WP53891 406 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms