RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	NTC20	P38302	140 aa	Predicted RBP	4.6	□□□□□ -1.67
SHE10	YGL228W	AIM46	P38885	310 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	YER121W	P40076	114 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	RPA34	P47006	233 aa	Predicted RBP	4.6	□□□□□ -1.67
SHE10	YGL228W	YGL262W	P53054	175 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	CWC25	P53854	179 aa	Known RBP	4.6	□□□□□ -1.67
SHE10	YGL228W	HSK3	P69852	69 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	YDR415C	Q04033	374 aa	Predicted RBP	4.6	□□□□□ -1.67
SHE10	YGL228W	RFM1	Q12192	310 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	PRM4	Q12498	284 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	OLE1	P21147	510 aa	Known RBP	4.59	□□□□□ -1.67
SHE10	YGL228W	MRP20	P32387	263 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	YPC1	P38298	316 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	CUE1	P38428	203 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	SIT1	P39980	628 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	PHM8	P40025	321 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	PIR5	P46999	287 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	ECM27	P47144	725 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	JAC1	P53193	184 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	ORM1	P53224	222 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	TEX1	P53851	422 aa	Known RBP	4.59	□□□□□ -1.67
SHE10	YGL228W	YNL046W	P53956	172 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	RIM9	Q04734	239 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	ASM4	Q05166	528 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	RRT7	Q07829	113 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	BBP1	Q12365	385 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	YMR105W-A	Q8TGS8	64 aa		4.59	□□□□□ -1.67
SHE10	YGL228W	FUS3	P16892	353 aa	Known RBP	4.58	□□□□□ -1.68
SHE10	YGL228W	SSO2	P39926	295 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	BMT5	P40493	336 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	IRC24	P40580	263 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	YHC3	P47040	408 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	TAD2	P47058	250 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	XPT1	P47165	209 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	VPS28	Q02767	242 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	DPB4	Q04603	196 aa	Known RBP	4.58	□□□□□ -1.68
SHE10	YGL228W	LIP2	Q06005	328 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	YOR292C	Q08743	309 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	YCT1	Q12235	531 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	YCL048W-A	Q2V2Q2	79 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	MAG1	P22134	296 aa	Known RBP	4.58	□□□□□ -1.68
SHE10	YGL228W	VMA8	P32610	256 aa	Known RBP	4.58	□□□□□ -1.68
SHE10	YGL228W	YUH1	P35127	236 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	SRY1	P36007	326 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	SAP30	P38429	201 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	LAG1	P38703	411 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	PCL7	P40186	285 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	RFC2	P40348	353 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	PRM5	P40476	318 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	YFL015C	P43578	164 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	TIM10	P87108	93 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	RPL21A	Q02753	160 aa	Known RBP	4.58	□□□□□ -1.68
SHE10	YGL228W	GMC1	Q04399	608 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	FMP16	Q12497	93 aa		4.58	□□□□□ -1.68
SHE10	YGL228W	RPL21B	Q12672	160 aa	Known RBP	4.58	□□□□□ -1.68
SHE10	YGL228W	URA2	P07259	2214 aa	Known RBP	4.57	□□□□□ -1.68
SHE10	YGL228W	PDC2	P32896	925 aa		4.57	□□□□□ -1.68
SHE10	YGL228W	REC104	P33323	182 aa		4.57	□□□□□ -1.68
SHE10	YGL228W	OSH7	P38755	437 aa		4.57	□□□□□ -1.68
SHE10	YGL228W	NOC4	Q06512	552 aa	Predicted RBP	4.57	□□□□□ -1.68
SHE10	YGL228W	PML1	Q07930	204 aa	Predicted RBP	4.57	□□□□□ -1.68
SHE10	YGL228W	YIL012W	P40551	113 aa		4.56	□□□□□ -1.68
SHE10	YGL228W	WSC2	P53832	503 aa		4.56	□□□□□ -1.68
SHE10	YGL228W	EST3	Q03096	181 aa		4.56	□□□□□ -1.68
SHE10	YGL228W	ANT1	Q06497	328 aa		4.56	□□□□□ -1.68
SHE10	YGL228W	YFH1	Q07540	174 aa		4.56	□□□□□ -1.68
SHE10	YGL228W	CPR5	P35176	225 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	ALG14	P38242	237 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	ERV15	P38312	142 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	VMA7	P39111	118 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	SYG1	P40528	902 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SHE10	YGL228W	YJR012C	P47087	207 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	YGL117W	P53133	265 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	GEP7	P53171	287 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	PNC1	P53184	216 aa	Known RBP	4.55	□□□□□ -1.68
SHE10	YGL228W	ACT1	P60010	375 aa	Known RBP	4.55	□□□□□ -1.68
SHE10	YGL228W	RTR2	Q12378	196 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	ATG5	Q12380	294 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	DGK1	Q12382	290 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	YLR146W-A	Q2V2P1	62 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	YBR255C-A	Q3E776	120 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	ATP10	P18496	279 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	COQ2	P32378	372 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	EMP24	P32803	203 aa	Known RBP	4.55	□□□□□ -1.68
SHE10	YGL228W	PRE3	P38624	215 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	IKI1	P38874	309 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	YEA6	P39953	335 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	AIR1	P40507	360 aa	Known RBP	4.55	□□□□□ -1.68
SHE10	YGL228W	NCA3	P46955	337 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	TTI2	P47168	421 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	SBH2	P52871	88 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	PKP2	P53170	491 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	MSO1	P53604	210 aa	Known RBP	4.55	□□□□□ -1.68
SHE10	YGL228W	YNR064C	P53750	290 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	YDL009C	Q12210	107 aa		4.55	□□□□□ -1.68
SHE10	YGL228W	GDH1	P07262	454 aa	Known RBP	4.54	□□□□□ -1.68
SHE10	YGL228W	ROX3	P25046	220 aa		4.54	□□□□□ -1.68
SHE10	YGL228W	LSB5	P25369	354 aa		4.54	□□□□□ -1.68
SHE10	YGL228W	SWM2	P40342	146 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 53 ms