RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C AIM45Q12480 344 aaKnown RBP5.63□□□□□ -1.51
YPT1YFL038C YPR145C-AQ2V2P0 78 aa5.63□□□□□ -1.51
YPT1YFL038C CSF1Q12150 2958 aa5.63□□□□□ -1.51
YPT1YFL038C ADH3P07246 375 aaKnown RBP5.62□□□□□ -1.51
YPT1YFL038C MET3P08536 511 aa5.62□□□□□ -1.51
YPT1YFL038C DAL82P21705 255 aa5.62□□□□□ -1.51
YPT1YFL038C DEG1P31115 442 aaKnown RBP5.62□□□□□ -1.51
YPT1YFL038C MNS1P32906 549 aa5.62□□□□□ -1.51
YPT1YFL038C CLB6P32943 380 aa5.62□□□□□ -1.51
YPT1YFL038C YUH1P35127 236 aa5.62□□□□□ -1.51
YPT1YFL038C EDS1P38073 919 aa5.62□□□□□ -1.51
YPT1YFL038C ECO1P43605 281 aa5.62□□□□□ -1.51
YPT1YFL038C PRY1P47032 299 aa5.62□□□□□ -1.51
YPT1YFL038C PBP1P53297 722 aaKnown RBP5.62□□□□□ -1.51
YPT1YFL038C DFG5Q05031 458 aa5.62□□□□□ -1.51
YPT1YFL038C FRE8Q12209 686 aa5.62□□□□□ -1.51
YPT1YFL038C IZH2Q12442 317 aa5.62□□□□□ -1.51
YPT1YFL038C YDR157WA0A023PZE8 133 aa5.61□□□□□ -1.51
YPT1YFL038C RPL25P04456 142 aaKnown RBP5.61□□□□□ -1.51
YPT1YFL038C GDH1P07262 454 aaKnown RBP5.61□□□□□ -1.51
YPT1YFL038C YFR010W-AP0C5N0 62 aa5.61□□□□□ -1.51
YPT1YFL038C SAG1P20840 650 aa5.61□□□□□ -1.51
YPT1YFL038C MRS4P23500 304 aa5.61□□□□□ -1.51
YPT1YFL038C RIB5P38145 238 aa5.61□□□□□ -1.51
YPT1YFL038C PRS2P38620 318 aaKnown RBP5.61□□□□□ -1.51
YPT1YFL038C PAC2P39937 518 aa5.61□□□□□ -1.51
YPT1YFL038C YER158CP40095 573 aa5.61□□□□□ -1.51
YPT1YFL038C RFC2P40348 353 aa5.61□□□□□ -1.51
YPT1YFL038C DAN1P47178 298 aa5.61□□□□□ -1.51
YPT1YFL038C HNT2P49775 206 aa5.61□□□□□ -1.51
YPT1YFL038C ERG25P53045 309 aa5.61□□□□□ -1.51
YPT1YFL038C MSO1P53604 210 aaKnown RBP5.61□□□□□ -1.51
YPT1YFL038C YDR391CQ04170 232 aa5.61□□□□□ -1.51
YPT1YFL038C COQ11Q05892 277 aa5.61□□□□□ -1.51
YPT1YFL038C GLT1Q12680 2145 aaKnown RBP5.61□□□□□ -1.51
YPT1YFL038C COA2Q3E823 68 aa5.61□□□□□ -1.51
YPT1YFL038C FMP27Q06179 2628 aa5.61□□□□□ -1.51
YPT1YFL038C SWD3P38123 315 aa5.6□□□□□ -1.51
YPT1YFL038C ARC40P38328 384 aaKnown RBP5.6□□□□□ -1.51
YPT1YFL038C VMA21P41806 77 aa5.6□□□□□ -1.51
YPT1YFL038C NSE4P43124 402 aa5.6□□□□□ -1.51
YPT1YFL038C PEF1P53238 335 aa5.6□□□□□ -1.51
YPT1YFL038C SKO1Q02100 647 aa5.6□□□□□ -1.51
YPT1YFL038C MRP51Q02950 344 aa5.6□□□□□ -1.51
YPT1YFL038C NUP53Q03790 475 aa5.6□□□□□ -1.51
YPT1YFL038C YAP6Q03935 383 aa5.6□□□□□ -1.51
YPT1YFL038C YMR090WQ04304 227 aaKnown RBP5.6□□□□□ -1.51
YPT1YFL038C GMC1Q04399 608 aa5.6□□□□□ -1.51
YPT1YFL038C YMR254CQ04838 102 aa5.6□□□□□ -1.51
YPT1YFL038C HOF1Q05080 669 aa5.6□□□□□ -1.51
YPT1YFL038C PAM18Q07914 168 aa5.6□□□□□ -1.51
YPT1YFL038C AGC1Q12482 902 aa5.6□□□□□ -1.51
YPT1YFL038C CMC2Q3E7A4 109 aa5.6□□□□□ -1.51
YPT1YFL038C HUG1Q6Q5K6 68 aa5.6□□□□□ -1.51
YPT1YFL038C CDC7P06243 507 aa5.59□□□□□ -1.51
YPT1YFL038C CBP6P07253 162 aaPredicted RBP5.59□□□□□ -1.51
YPT1YFL038C MAK32P23060 363 aa5.59□□□□□ -1.51
YPT1YFL038C YCR025CP25352 136 aa5.59□□□□□ -1.51
YPT1YFL038C ERV1P27882 189 aa5.59□□□□□ -1.51
YPT1YFL038C NUD1P32336 851 aa5.59□□□□□ -1.51
YPT1YFL038C MCH2P36032 473 aa5.59□□□□□ -1.51
YPT1YFL038C MRPL4P36517 319 aa5.59□□□□□ -1.51
YPT1YFL038C SDH4P37298 181 aa5.59□□□□□ -1.51
YPT1YFL038C MGE1P38523 228 aa5.59□□□□□ -1.51
YPT1YFL038C YER079WP40052 210 aaKnown RBP5.59□□□□□ -1.51
YPT1YFL038C YIL169CP40442 995 aa5.59□□□□□ -1.51
YPT1YFL038C YIL029CP40538 142 aa5.59□□□□□ -1.51
YPT1YFL038C PAU15P40585 124 aa5.59□□□□□ -1.51
YPT1YFL038C DUG1P43616 481 aaKnown RBP5.59□□□□□ -1.51
YPT1YFL038C YDR209CQ03480 137 aa5.59□□□□□ -1.51
YPT1YFL038C PIN3Q06449 215 aa5.59□□□□□ -1.51
YPT1YFL038C TDA6Q06466 467 aa5.59□□□□□ -1.51
YPT1YFL038C ALG6Q12001 544 aaKnown RBP5.59□□□□□ -1.51
YPT1YFL038C YOR015WQ12169 119 aa5.59□□□□□ -1.51
YPT1YFL038C PRR2Q12310 699 aa5.59□□□□□ -1.51
YPT1YFL038C WHI5Q12416 295 aa5.59□□□□□ -1.51
YPT1YFL038C MSI1P13712 422 aa5.58□□□□□ -1.52
YPT1YFL038C RPB3P16370 318 aaKnown RBP5.58□□□□□ -1.52
YPT1YFL038C LAC1P28496 418 aa5.58□□□□□ -1.52
YPT1YFL038C RTG1P32607 177 aa5.58□□□□□ -1.52
YPT1YFL038C NTF2P33331 125 aaKnown RBP5.58□□□□□ -1.52
YPT1YFL038C MRPL39P36533 70 aa5.58□□□□□ -1.52
YPT1YFL038C NTC20P38302 140 aaPredicted RBP5.58□□□□□ -1.52
YPT1YFL038C FLO5P38894 1075 aa5.58□□□□□ -1.52
YPT1YFL038C UME6P39001 836 aa5.58□□□□□ -1.52
YPT1YFL038C PEX7P39108 375 aa5.58□□□□□ -1.52
YPT1YFL038C PHS1P40857 217 aa5.58□□□□□ -1.52
YPT1YFL038C OST1P41543 476 aaKnown RBP5.58□□□□□ -1.52
YPT1YFL038C SMD3P43321 101 aaKnown RBP5.58□□□□□ -1.52
YPT1YFL038C YGL262WP53054 175 aa5.58□□□□□ -1.52
YPT1YFL038C YLR179CQ06252 201 aaKnown RBP5.58□□□□□ -1.52
YPT1YFL038C YDL242WQ07746 117 aa5.58□□□□□ -1.52
YPT1YFL038C YPL264CQ08980 353 aa5.58□□□□□ -1.52
YPT1YFL038C YDL180WQ12301 547 aa5.58□□□□□ -1.52
YPT1YFL038C YLR118CQ12354 227 aa5.58□□□□□ -1.52
YPT1YFL038C MPD1Q12404 318 aaKnown RBP5.58□□□□□ -1.52
YPT1YFL038C HFA1P32874 2273 aa5.57□□□□□ -1.52
YPT1YFL038C SEC59P20048 519 aa5.57□□□□□ -1.52
YPT1YFL038C POF1P25576 258 aa5.57□□□□□ -1.52
YPT1YFL038C IMP1P28627 190 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms