RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W YLR159WP0CE97 114 aa1.9□□□□□ -2.11
LSM4YER112W YLR161WP0CE98 114 aa1.9□□□□□ -2.11
LSM4YER112W STE18P18852 110 aa1.9□□□□□ -2.11
LSM4YER112W ERG28P40030 148 aa1.9□□□□□ -2.11
LSM4YER112W YER135CP40082 130 aa1.9□□□□□ -2.11
LSM4YER112W TSC3Q3E790 80 aa1.9□□□□□ -2.11
LSM4YER112W COQ1P18900 473 aa1.89□□□□□ -2.11
LSM4YER112W DBF2P22204 572 aa1.89□□□□□ -2.11
LSM4YER112W ADO1P47143 340 aaKnown RBP1.89□□□□□ -2.11
LSM4YER112W SPG3Q04398 127 aaPredicted RBP1.89□□□□□ -2.11
LSM4YER112W SML1Q04964 104 aa1.89□□□□□ -2.11
LSM4YER112W YOL162WP0CF19 215 aa1.88□□□□□ -2.11
LSM4YER112W TCA17P32613 152 aa1.88□□□□□ -2.11
LSM4YER112W MGM101P32787 269 aaKnown RBP1.88□□□□□ -2.11
LSM4YER112W PRP18P33411 251 aaPredicted RBP1.88□□□□□ -2.11
LSM4YER112W PRX1P34227 261 aaKnown RBP1.88□□□□□ -2.11
LSM4YER112W YET1P35723 206 aa1.88□□□□□ -2.11
LSM4YER112W RMD6P39975 231 aa1.88□□□□□ -2.11
LSM4YER112W YNL217WP40152 326 aa1.88□□□□□ -2.11
LSM4YER112W MGA1P53050 456 aa1.88□□□□□ -2.11
LSM4YER112W BOL2P53082 120 aa1.88□□□□□ -2.11
LSM4YER112W SWP1Q02795 286 aa1.88□□□□□ -2.11
LSM4YER112W RNH1Q04740 348 aa1.88□□□□□ -2.11
LSM4YER112W TDA8Q6B2U8 126 aa1.88□□□□□ -2.11
LSM4YER112W YIL177CP40434 1758 aa1.87□□□□□ -2.11
LSM4YER112W YJL225CP40889 1758 aa1.87□□□□□ -2.11
LSM4YER112W RPL27BP0C2H7 136 aaKnown RBP1.87□□□□□ -2.11
LSM4YER112W SNC2P33328 115 aa1.87□□□□□ -2.11
LSM4YER112W CBT1P36038 271 aaPredicted RBP1.87□□□□□ -2.11
LSM4YER112W UMP1P38293 148 aa1.87□□□□□ -2.11
LSM4YER112W YNL194CP40169 301 aa1.87□□□□□ -2.11
LSM4YER112W IRC18P47056 224 aa1.87□□□□□ -2.11
LSM4YER112W RAD17P48581 401 aa1.87□□□□□ -2.11
LSM4YER112W DOC1P53068 250 aa1.87□□□□□ -2.11
LSM4YER112W PGA2P53903 129 aa1.87□□□□□ -2.11
LSM4YER112W GAS3Q03655 524 aa1.87□□□□□ -2.11
LSM4YER112W BNA7Q04066 261 aa1.87□□□□□ -2.11
LSM4YER112W FZF1P32805 299 aa1.86□□□□□ -2.11
LSM4YER112W YBR219CP38317 127 aa1.86□□□□□ -2.11
LSM4YER112W AST2P39945 430 aaKnown RBP1.86□□□□□ -2.11
LSM4YER112W MET5P47169 1442 aa1.85□□□□□ -2.11
LSM4YER112W CDC33P07260 213 aaKnown RBP1.85□□□□□ -2.11
LSM4YER112W GCN3P14741 305 aa1.85□□□□□ -2.11
LSM4YER112W YKR045CP36138 183 aa1.85□□□□□ -2.11
LSM4YER112W MRPL17P36528 281 aa1.85□□□□□ -2.11
LSM4YER112W SIP3P38717 1229 aa1.85□□□□□ -2.11
LSM4YER112W CWC23P52868 283 aaPredicted RBP1.85□□□□□ -2.11
LSM4YER112W PDR17P53844 350 aa1.85□□□□□ -2.11
LSM4YER112W SEC4P07560 215 aaKnown RBP1.84□□□□□ -2.11
LSM4YER112W YGL010WP25338 174 aa1.84□□□□□ -2.11
LSM4YER112W NTG1P31378 399 aa1.84□□□□□ -2.11
LSM4YER112W YPL162CQ12042 273 aa1.84□□□□□ -2.11
LSM4YER112W UBR2Q07963 1872 aa1.84□□□□□ -2.12
LSM4YER112W TIM9O74700 87 aa1.83□□□□□ -2.12
LSM4YER112W URA5P13298 226 aaKnown RBP1.83□□□□□ -2.12
LSM4YER112W RPB4P20433 221 aaPredicted RBP1.83□□□□□ -2.12
LSM4YER112W MAG1P22134 296 aaKnown RBP1.83□□□□□ -2.12
LSM4YER112W BET1P22804 142 aa1.83□□□□□ -2.12
LSM4YER112W IDH1P28834 360 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
LSM4YER112W SEC17P32602 292 aa1.83□□□□□ -2.12
LSM4YER112W PTM1P32857 523 aa1.83□□□□□ -2.12
LSM4YER112W TRM5P38793 499 aa1.83□□□□□ -2.12
LSM4YER112W YRB2P40517 327 aa1.83□□□□□ -2.12
LSM4YER112W GVP36P40531 326 aaKnown RBP1.83□□□□□ -2.12
LSM4YER112W SAY1P53324 424 aa1.83□□□□□ -2.12
LSM4YER112W TIM11P81449 96 aaPredicted RBP1.83□□□□□ -2.12
LSM4YER112W MZM1Q03429 123 aaPredicted RBP1.83□□□□□ -2.12
LSM4YER112W GPM2Q12008 311 aa1.83□□□□□ -2.12
LSM4YER112W MCP1Q12106 302 aa1.83□□□□□ -2.12
LSM4YER112W FLO9P39712 1322 aa1.83□□□□□ -2.12
LSM4YER112W TUS1Q06412 1307 aa1.83□□□□□ -2.12
LSM4YER112W YDR157WA0A023PZE8 133 aa1.82□□□□□ -2.12
LSM4YER112W RPL25P04456 142 aaKnown RBP1.82□□□□□ -2.12
LSM4YER112W KSS1P14681 368 aa1.82□□□□□ -2.12
LSM4YER112W TMA19P35691 167 aaKnown RBP1.82□□□□□ -2.12
LSM4YER112W UTP30P36144 274 aaKnown RBP1.82□□□□□ -2.12
LSM4YER112W YBR220CP38318 560 aa1.82□□□□□ -2.12
LSM4YER112W RPL13BP40212 199 aaKnown RBP1.82□□□□□ -2.12
LSM4YER112W YGR050CP53231 118 aa1.82□□□□□ -2.12
LSM4YER112W YLR162WQ06235 118 aa1.82□□□□□ -2.12
LSM4YER112W FSF1Q12029 327 aaKnown RBP1.82□□□□□ -2.12
LSM4YER112W MDM32Q12171 622 aa1.82□□□□□ -2.12
LSM4YER112W RPL13AQ12690 199 aaPredicted RBP1.82□□□□□ -2.12
LSM4YER112W CYR1P08678 2026 aaKnown RBP1.81□□□□□ -2.12
LSM4YER112W TFC1P32367 649 aa1.81□□□□□ -2.12
LSM4YER112W YBR285WP38354 144 aa1.81□□□□□ -2.12
LSM4YER112W IKI1P38874 309 aa1.81□□□□□ -2.12
LSM4YER112W GAA1P39012 614 aa1.81□□□□□ -2.12
LSM4YER112W YNR077CP53758 84 aa1.81□□□□□ -2.12
LSM4YER112W LSM7P53905 115 aaKnown RBP1.81□□□□□ -2.12
LSM4YER112W YDR249CQ03787 373 aa1.81□□□□□ -2.12
LSM4YER112W ANT1Q06497 328 aa1.81□□□□□ -2.12
LSM4YER112W ARG80P07249 177 aa1.8□□□□□ -2.12
LSM4YER112W SHE2P36068 246 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
LSM4YER112W YCR087C-AP37263 153 aa1.8□□□□□ -2.12
LSM4YER112W YBR209WP38311 105 aa1.8□□□□□ -2.12
LSM4YER112W YMR226CQ05016 267 aaKnown RBP1.8□□□□□ -2.12
LSM4YER112W CSI2Q08054 341 aa1.8□□□□□ -2.12
LSM4YER112W GIS3Q12418 502 aa1.8□□□□□ -2.12
LSM4YER112W ATG40Q99325 256 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms