RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C YLR161WP0CE98 114 aa1.02□□□□□ -2.25
SMB1YER029C NHP6BP11633 99 aaKnown RBP1.02□□□□□ -2.25
SMB1YER029C PBN1P25580 416 aa1.02□□□□□ -2.25
SMB1YER029C SSO1P32867 290 aa1.02□□□□□ -2.25
SMB1YER029C CBT1P36038 271 aaPredicted RBP1.02□□□□□ -2.25
SMB1YER029C YNL194CP40169 301 aa1.02□□□□□ -2.25
SMB1YER029C PGD1P40356 397 aa1.02□□□□□ -2.25
SMB1YER029C NUP57P48837 541 aa1.02□□□□□ -2.25
SMB1YER029C BRR6P53062 197 aa1.02□□□□□ -2.25
SMB1YER029C YNL010WP53981 241 aaKnown RBP1.02□□□□□ -2.25
SMB1YER029C SNZ1Q03148 297 aa1.02□□□□□ -2.25
SMB1YER029C YDR248CQ03786 193 aa1.02□□□□□ -2.25
SMB1YER029C RPL27BP0C2H7 136 aaKnown RBP1.01□□□□□ -2.25
SMB1YER029C YBR121C-AP0C5L4 52 aa1.01□□□□□ -2.25
SMB1YER029C FPR1P20081 114 aaKnown RBP1.01□□□□□ -2.25
SMB1YER029C APS1P35181 156 aa1.01□□□□□ -2.25
SMB1YER029C POP4P38336 279 aa1.01□□□□□ -2.25
SMB1YER029C TCD1P38756 429 aa1.01□□□□□ -2.25
SMB1YER029C RPL13BP40212 199 aaKnown RBP1.01□□□□□ -2.25
SMB1YER029C TIR3P40552 269 aa1.01□□□□□ -2.25
SMB1YER029C MSS2P40990 351 aa1.01□□□□□ -2.25
SMB1YER029C ADO1P47143 340 aaKnown RBP1.01□□□□□ -2.25
SMB1YER029C PRM8P53174 237 aa1.01□□□□□ -2.25
SMB1YER029C YNR077CP53758 84 aa1.01□□□□□ -2.25
SMB1YER029C DID2P69771 204 aa1.01□□□□□ -2.25
SMB1YER029C YML108WQ03759 105 aa1.01□□□□□ -2.25
SMB1YER029C RPL13AQ12690 199 aaPredicted RBP1.01□□□□□ -2.25
SMB1YER029C TDA8Q6B2U8 126 aa1.01□□□□□ -2.25
SMB1YER029C FLO9P39712 1322 aa1□□□□□ -2.25
SMB1YER029C ICE2P40499 491 aa1□□□□□ -2.25
SMB1YER029C YRB2P40517 327 aa1□□□□□ -2.25
SMB1YER029C FAR7P43592 221 aa1□□□□□ -2.25
SMB1YER029C JLP1Q12358 412 aa1□□□□□ -2.25
SMB1YER029C GIS3Q12418 502 aa1□□□□□ -2.25
SMB1YER029C YHR214C-EQ8TGK0 99 aa1□□□□□ -2.25
SMB1YER029C PDR18P53756 1333 aa0.99□□□□□ -2.25
SMB1YER029C YDR157WA0A023PZE8 133 aa0.99□□□□□ -2.25
SMB1YER029C CDC33P07260 213 aaKnown RBP0.99□□□□□ -2.25
SMB1YER029C STE18P18852 110 aa0.99□□□□□ -2.25
SMB1YER029C COQ1P18900 473 aa0.99□□□□□ -2.25
SMB1YER029C MRPS28P21771 286 aa0.99□□□□□ -2.25
SMB1YER029C TCA17P32613 152 aa0.99□□□□□ -2.25
SMB1YER029C FZF1P32805 299 aa0.99□□□□□ -2.25
SMB1YER029C PRP18P33411 251 aaPredicted RBP0.99□□□□□ -2.25
SMB1YER029C UTP30P36144 274 aaKnown RBP0.99□□□□□ -2.25
SMB1YER029C MRPL28P36527 147 aa0.99□□□□□ -2.25
SMB1YER029C YNL217WP40152 326 aa0.99□□□□□ -2.25
SMB1YER029C YRB1P41920 201 aaKnown RBP0.99□□□□□ -2.25
SMB1YER029C RAD17P48581 401 aa0.99□□□□□ -2.25
SMB1YER029C CWC23P52868 283 aaPredicted RBP0.99□□□□□ -2.25
SMB1YER029C MGA1P53050 456 aa0.99□□□□□ -2.25
SMB1YER029C DOC1P53068 250 aa0.99□□□□□ -2.25
SMB1YER029C RNH1Q04740 348 aa0.99□□□□□ -2.25
SMB1YER029C TUS1Q06412 1307 aa0.98□□□□□ -2.25
SMB1YER029C TIM9O74700 87 aa0.98□□□□□ -2.25
SMB1YER029C PRX1P34227 261 aaKnown RBP0.98□□□□□ -2.25
SMB1YER029C SKG1P36169 355 aa0.98□□□□□ -2.25
SMB1YER029C MRPL17P36528 281 aa0.98□□□□□ -2.25
SMB1YER029C SIP3P38717 1229 aa0.98□□□□□ -2.25
SMB1YER029C EAF6P47128 113 aa0.98□□□□□ -2.25
SMB1YER029C TIM11P81449 96 aaPredicted RBP0.98□□□□□ -2.25
SMB1YER029C SWP1Q02795 286 aa0.98□□□□□ -2.25
SMB1YER029C YPL162CQ12042 273 aa0.98□□□□□ -2.25
SMB1YER029C MCP1Q12106 302 aa0.98□□□□□ -2.25
SMB1YER029C RIO1Q12196 484 aaKnown RBP0.98□□□□□ -2.25
SMB1YER029C RUD3Q12234 484 aaKnown RBP0.98□□□□□ -2.25
SMB1YER029C TSC3Q3E790 80 aa0.98□□□□□ -2.25
SMB1YER029C GCN3P14741 305 aa0.97□□□□□ -2.25
SMB1YER029C SPS18P32572 300 aa0.97□□□□□ -2.25
SMB1YER029C SEC17P32602 292 aa0.97□□□□□ -2.25
SMB1YER029C MGM101P32787 269 aaKnown RBP0.97□□□□□ -2.25
SMB1YER029C PTM1P32857 523 aa0.97□□□□□ -2.25
SMB1YER029C YET1P35723 206 aa0.97□□□□□ -2.25
SMB1YER029C AST2P39945 430 aaKnown RBP0.97□□□□□ -2.25
SMB1YER029C RMD6P39975 231 aa0.97□□□□□ -2.25
SMB1YER029C PET191Q02772 108 aa0.97□□□□□ -2.25
SMB1YER029C MET5P47169 1442 aa0.97□□□□□ -2.25
SMB1YER029C SEC4P07560 215 aaKnown RBP0.96□□□□□ -2.26
SMB1YER029C IDH1P28834 360 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
SMB1YER029C TAF14P35189 244 aa0.96□□□□□ -2.26
SMB1YER029C UMP1P38293 148 aa0.96□□□□□ -2.26
SMB1YER029C GAA1P39012 614 aa0.96□□□□□ -2.26
SMB1YER029C GVP36P40531 326 aaKnown RBP0.96□□□□□ -2.26
SMB1YER029C GCN20P43535 752 aaKnown RBP0.96□□□□□ -2.26
SMB1YER029C YGR050CP53231 118 aa0.96□□□□□ -2.26
SMB1YER029C PDR17P53844 350 aa0.96□□□□□ -2.26
SMB1YER029C PGA2P53903 129 aa0.96□□□□□ -2.26
SMB1YER029C YFR032C-BQ8TGU2 87 aa0.96□□□□□ -2.26
SMB1YER029C NCB2Q92317 146 aa0.96□□□□□ -2.26
SMB1YER029C GPA2P10823 449 aa0.95□□□□□ -2.26
SMB1YER029C KSS1P14681 368 aa0.95□□□□□ -2.26
SMB1YER029C YDR249CQ03787 373 aa0.95□□□□□ -2.26
SMB1YER029C BNA7Q04066 261 aa0.95□□□□□ -2.26
SMB1YER029C YOL160WQ08321 113 aa0.95□□□□□ -2.26
SMB1YER029C YLR422WQ06409 1932 aa0.94□□□□□ -2.26
SMB1YER029C CDC36P06100 191 aaPredicted RBP0.94□□□□□ -2.26
SMB1YER029C CPA1P07258 411 aaKnown RBP0.94□□□□□ -2.26
SMB1YER029C MER1P16523 270 aa0.94□□□□□ -2.26
SMB1YER029C BET1P22804 142 aa0.94□□□□□ -2.26
SMB1YER029C SNC2P33328 115 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms