RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	FIP1	P45976	327 aa		3.36	□□□□□ -1.87
UBC8	YEL012W	PIR5	P46999	287 aa		3.36	□□□□□ -1.87
UBC8	YEL012W	UFD1	P53044	361 aa		3.36	□□□□□ -1.87
UBC8	YEL012W	BOR1	P53838	576 aa		3.36	□□□□□ -1.87
UBC8	YEL012W	YMR102C	Q03177	834 aa		3.36	□□□□□ -1.87
UBC8	YEL012W	ABZ2	Q03266	374 aa		3.36	□□□□□ -1.87
UBC8	YEL012W	RTT103	Q05543	409 aa		3.36	□□□□□ -1.87
UBC8	YEL012W	YPR098C	Q06089	161 aa		3.36	□□□□□ -1.87
UBC8	YEL012W	FCY22	Q12119	530 aa		3.36	□□□□□ -1.87
UBC8	YEL012W	CAP2	P13517	287 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	SAG1	P20840	650 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	CPR4	P25334	318 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	FZO1	P38297	855 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	PRM5	P40476	318 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	EFM3	P47163	339 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	GPI8	P49018	411 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	MIG2	P53035	382 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	SAY1	P53324	424 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	YNL095C	P53932	642 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	DIG2	Q03373	323 aa	Known RBP	3.35	□□□□□ -1.87
UBC8	YEL012W	OST6	Q03723	332 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	SPC2	Q04969	178 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	MRX8	Q05473	314 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	ADF1	Q2V2Q1	113 aa		3.35	□□□□□ -1.87
UBC8	YEL012W	TRP1	P00912	224 aa		3.34	□□□□□ -1.87
UBC8	YEL012W	NAM2	P11325	894 aa		3.34	□□□□□ -1.87
UBC8	YEL012W	CDC10	P25342	322 aa	Known RBP	3.34	□□□□□ -1.87
UBC8	YEL012W	IPT1	P38954	527 aa		3.34	□□□□□ -1.87
UBC8	YEL012W	SPO73	P40031	143 aa		3.34	□□□□□ -1.87
UBC8	YEL012W	TMA22	P47089	198 aa	Predicted RBP	3.34	□□□□□ -1.87
UBC8	YEL012W	VOA1	P53262	265 aa		3.34	□□□□□ -1.87
UBC8	YEL012W	YDR248C	Q03786	193 aa		3.34	□□□□□ -1.87
UBC8	YEL012W	YOR289W	Q12012	251 aa	Predicted RBP	3.34	□□□□□ -1.87
UBC8	YEL012W	FCY1	Q12178	158 aa		3.34	□□□□□ -1.87
UBC8	YEL012W	RPL30	P14120	105 aa	Known RBP	3.33	□□□□□ -1.88
UBC8	YEL012W	UBC8	P28263	218 aa		3.33	□□□□□ -1.88
UBC8	YEL012W	ZRT3	P34240	503 aa		3.33	□□□□□ -1.88
UBC8	YEL012W	FRM2	P37261	193 aa		3.33	□□□□□ -1.88
UBC8	YEL012W	ATP3	P38077	311 aa	Known RBP	3.33	□□□□□ -1.88
UBC8	YEL012W	RMR1	P53060	241 aa		3.33	□□□□□ -1.88
UBC8	YEL012W	NQM1	P53228	333 aa	Predicted RBP	3.33	□□□□□ -1.88
UBC8	YEL012W	HHT1	P61830	136 aa		3.33	□□□□□ -1.88
UBC8	YEL012W	MRPL35	Q06678	367 aa		3.33	□□□□□ -1.88
UBC8	YEL012W	DTD1	Q07648	150 aa	Known RBP	3.33	□□□□□ -1.88
UBC8	YEL012W	TDH2	P00358	332 aa	Known RBP	3.32	□□□□□ -1.88
UBC8	YEL012W	REP2	P03872	296 aa		3.32	□□□□□ -1.88
UBC8	YEL012W	SGA1	P08019	549 aa		3.32	□□□□□ -1.88
UBC8	YEL012W	RPS8A	P0CX39	200 aa	Known RBP	3.32	□□□□□ -1.88
UBC8	YEL012W	RPS8B	P0CX40	200 aa	Known RBP	3.32	□□□□□ -1.88
UBC8	YEL012W	CUE1	P38428	203 aa		3.32	□□□□□ -1.88
UBC8	YEL012W	RRG9	P40156	214 aa		3.32	□□□□□ -1.88
UBC8	YEL012W	YFL067W	P43537	175 aa		3.32	□□□□□ -1.88
UBC8	YEL012W	WWM1	P43582	211 aa	Known RBP	3.32	□□□□□ -1.88
UBC8	YEL012W	RPA34	P47006	233 aa	Predicted RBP	3.32	□□□□□ -1.88
UBC8	YEL012W	YGL114W	P53134	725 aa		3.32	□□□□□ -1.88
UBC8	YEL012W	RFU1	Q08003	200 aa		3.32	□□□□□ -1.88
UBC8	YEL012W	MPD1	Q12404	318 aa	Known RBP	3.32	□□□□□ -1.88
UBC8	YEL012W	RIB3	Q99258	208 aa		3.32	□□□□□ -1.88
UBC8	YEL012W	TPK3	P05986	398 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	TFC1	P32367	649 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.31	□□□□□ -1.88	not detected
UBC8	YEL012W	GPX2	P38143	162 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	RPA43	P46669	326 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	YGL159W	P53110	370 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	AAH1	P53909	347 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	YKR005C	Q02203	525 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	PBA1	Q05778	276 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	MDM36	Q06820	579 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	LDS2	Q08218	356 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	RFM1	Q12192	310 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	ATO3	Q12359	275 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	YOP1	Q12402	180 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	EAF3	Q12432	401 aa		3.31	□□□□□ -1.88
UBC8	YEL012W	SNF4	P12904	322 aa		3.3	□□□□□ -1.88
UBC8	YEL012W	PHO80	P20052	293 aa		3.3	□□□□□ -1.88
UBC8	YEL012W	IMP1	P28627	190 aa		3.3	□□□□□ -1.88
UBC8	YEL012W	AVT5	P38176	459 aa		3.3	□□□□□ -1.88
UBC8	YEL012W	YGL262W	P53054	175 aa		3.3	□□□□□ -1.88
UBC8	YEL012W	SNZ1	Q03148	297 aa		3.3	□□□□□ -1.88
UBC8	YEL012W	GAL83	Q04739	417 aa		3.3	□□□□□ -1.88
UBC8	YEL012W	YMR226C	Q05016	267 aa	Known RBP	3.3	□□□□□ -1.88
UBC8	YEL012W	AIM45	Q12480	344 aa	Known RBP	3.3	□□□□□ -1.88
UBC8	YEL012W	HUT1	Q12520	339 aa		3.3	□□□□□ -1.88
UBC8	YEL012W	TAL1	P15019	335 aa	Known RBP	3.29	□□□□□ -1.88
UBC8	YEL012W	HXT2	P23585	541 aa		3.29	□□□□□ -1.88
UBC8	YEL012W	OAC1	P32332	324 aa		3.29	□□□□□ -1.88
UBC8	YEL012W	ANR2	P36090	516 aa	Predicted RBP	3.29	□□□□□ -1.88
UBC8	YEL012W	PAM16	P42949	149 aa		3.29	□□□□□ -1.88
UBC8	YEL012W	FAR7	P43592	221 aa		3.29	□□□□□ -1.88
UBC8	YEL012W	XPT1	P47165	209 aa		3.29	□□□□□ -1.88
UBC8	YEL012W	NRK1	P53915	240 aa		3.29	□□□□□ -1.88
UBC8	YEL012W	YPL067C	Q02754	198 aa		3.29	□□□□□ -1.88
UBC8	YEL012W	YLR173W	Q06247	608 aa		3.29	□□□□□ -1.88
UBC8	YEL012W	PEX27	Q08580	376 aa		3.29	□□□□□ -1.88
UBC8	YEL012W	RPL24A	P04449	155 aa	Known RBP	3.28	□□□□□ -1.88
UBC8	YEL012W	TOM40	P23644	387 aa	Known RBP	3.28	□□□□□ -1.88
UBC8	YEL012W	SUA7	P29055	345 aa	Predicted RBP	3.28	□□□□□ -1.88
UBC8	YEL012W	AUA1	P32450	94 aa		3.28	□□□□□ -1.88
UBC8	YEL012W	MRPL6	P32904	214 aa		3.28	□□□□□ -1.88
UBC8	YEL012W	YBL059W	P34224	193 aa		3.28	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms