RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W RPL13BP40212 199 aaKnown RBP1.07□□□□□ -2.24
VPS52YDR484W BXI1P48558 297 aa1.07□□□□□ -2.24
VPS52YDR484W DOC1P53068 250 aa1.07□□□□□ -2.24
VPS52YDR484W RPL13AQ12690 199 aaPredicted RBP1.07□□□□□ -2.24
VPS52YDR484W TSC3Q3E790 80 aa1.07□□□□□ -2.24
VPS52YDR484W CYR1P08678 2026 aaKnown RBP1.07□□□□□ -2.24
VPS52YDR484W RPL28P02406 149 aaKnown RBP1.07□□□□□ -2.24
VPS52YDR484W FPR1P20081 114 aaKnown RBP1.07□□□□□ -2.24
VPS52YDR484W SNC2P33328 115 aa1.07□□□□□ -2.24
VPS52YDR484W BMH2P34730 273 aaKnown RBP1.07□□□□□ -2.24
VPS52YDR484W TMA19P35691 167 aaKnown RBP1.07□□□□□ -2.24
VPS52YDR484W YRB2P40517 327 aa1.07□□□□□ -2.24
VPS52YDR484W YRB1P41920 201 aaKnown RBP1.07□□□□□ -2.24
VPS52YDR484W NUP57P48837 541 aa1.07□□□□□ -2.24
VPS52YDR484W SAY1P53324 424 aa1.07□□□□□ -2.24
VPS52YDR484W SWP1Q02795 286 aa1.07□□□□□ -2.24
VPS52YDR484W TDA8Q6B2U8 126 aa1.07□□□□□ -2.24
VPS52YDR484W MET5P47169 1442 aa1.06□□□□□ -2.24
VPS52YDR484W DBF2P22204 572 aa1.06□□□□□ -2.24
VPS52YDR484W APS1P35181 156 aa1.06□□□□□ -2.24
VPS52YDR484W RTR1P40084 226 aaPredicted RBP1.06□□□□□ -2.24
VPS52YDR484W ALG13P53178 202 aa1.06□□□□□ -2.24
VPS52YDR484W SEY1Q99287 776 aa1.06□□□□□ -2.24
VPS52YDR484W YBR121C-AP0C5L4 52 aa1.05□□□□□ -2.24
VPS52YDR484W RPL2AP0CX45 254 aaKnown RBP1.05□□□□□ -2.24
VPS52YDR484W RPL2BP0CX46 254 aaKnown RBP1.05□□□□□ -2.24
VPS52YDR484W GPA2P10823 449 aa1.05□□□□□ -2.24
VPS52YDR484W NHP6BP11633 99 aaKnown RBP1.05□□□□□ -2.24
VPS52YDR484W MRPL17P36528 281 aa1.05□□□□□ -2.24
VPS52YDR484W TCD1P38756 429 aa1.05□□□□□ -2.24
VPS52YDR484W GAA1P39012 614 aa1.05□□□□□ -2.24
VPS52YDR484W GLE2P40066 365 aa1.05□□□□□ -2.24
VPS52YDR484W OTU1P43558 301 aa1.05□□□□□ -2.24
VPS52YDR484W NUP49Q02199 472 aa1.05□□□□□ -2.24
VPS52YDR484W GAS3Q03655 524 aa1.05□□□□□ -2.24
VPS52YDR484W ANT1Q06497 328 aa1.05□□□□□ -2.24
VPS52YDR484W TCA17P32613 152 aa1.05□□□□□ -2.24
VPS52YDR484W UPS2P35200 230 aa1.05□□□□□ -2.24
VPS52YDR484W RIO1Q12196 484 aaKnown RBP1.05□□□□□ -2.24
VPS52YDR484W NCB2Q92317 146 aa1.05□□□□□ -2.24
VPS52YDR484W TIM9O74700 87 aa1.04□□□□□ -2.24
VPS52YDR484W TFC1P32367 649 aa1.04□□□□□ -2.24
VPS52YDR484W YBR209WP38311 105 aa1.04□□□□□ -2.24
VPS52YDR484W RMD6P39975 231 aa1.04□□□□□ -2.24
VPS52YDR484W GVP36P40531 326 aaKnown RBP1.04□□□□□ -2.24
VPS52YDR484W YNR077CP53758 84 aa1.04□□□□□ -2.24
VPS52YDR484W GPM2Q12008 311 aa1.04□□□□□ -2.24
VPS52YDR484W FSF1Q12029 327 aaKnown RBP1.04□□□□□ -2.24
VPS52YDR484W YPL162CQ12042 273 aa1.04□□□□□ -2.24
VPS52YDR484W JLP1Q12358 412 aa1.04□□□□□ -2.24
VPS52YDR484W TUS1Q06412 1307 aa1.04□□□□□ -2.24
VPS52YDR484W PBN1P25580 416 aa1.03□□□□□ -2.24
VPS52YDR484W SEC17P32602 292 aa1.03□□□□□ -2.24
VPS52YDR484W RTC3P38804 111 aaPredicted RBP1.03□□□□□ -2.24
VPS52YDR484W IRC18P47056 224 aa1.03□□□□□ -2.24
VPS52YDR484W MCP1Q12106 302 aa1.03□□□□□ -2.24
VPS52YDR484W YKL183C-AQ3E765 70 aa1.03□□□□□ -2.24
VPS52YDR484W QCR8P08525 94 aa1.03□□□□□ -2.25
VPS52YDR484W URA5P13298 226 aaKnown RBP1.03□□□□□ -2.25
VPS52YDR484W GCN3P14741 305 aa1.03□□□□□ -2.25
VPS52YDR484W STE18P18852 110 aa1.03□□□□□ -2.25
VPS52YDR484W AST2P39945 430 aaKnown RBP1.03□□□□□ -2.25
VPS52YDR484W ERG28P40030 148 aa1.03□□□□□ -2.25
VPS52YDR484W GCN20P43535 752 aaKnown RBP1.03□□□□□ -2.25
VPS52YDR484W ERJ5P43613 295 aaPredicted RBP1.03□□□□□ -2.25
VPS52YDR484W ADO1P47143 340 aaKnown RBP1.03□□□□□ -2.25
VPS52YDR484W MGA1P53050 456 aa1.03□□□□□ -2.25
VPS52YDR484W RUD3Q12234 484 aaKnown RBP1.03□□□□□ -2.25
VPS52YDR484W PDR18P53756 1333 aa1.03□□□□□ -2.25
VPS52YDR484W KSS1P14681 368 aa1.02□□□□□ -2.25
VPS52YDR484W COQ1P18900 473 aa1.02□□□□□ -2.25
VPS52YDR484W BET1P22804 142 aa1.02□□□□□ -2.25
VPS52YDR484W MGM101P32787 269 aaKnown RBP1.02□□□□□ -2.25
VPS52YDR484W PTM1P32857 523 aa1.02□□□□□ -2.25
VPS52YDR484W SHE2P36068 246 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
VPS52YDR484W UTP30P36144 274 aaKnown RBP1.02□□□□□ -2.25
VPS52YDR484W YBR285WP38354 144 aa1.02□□□□□ -2.25
VPS52YDR484W SIP3P38717 1229 aa1.02□□□□□ -2.25
VPS52YDR484W EAF6P47128 113 aa1.02□□□□□ -2.25
VPS52YDR484W PDR17P53844 350 aa1.02□□□□□ -2.25
VPS52YDR484W ATG40Q99325 256 aa1.02□□□□□ -2.25
VPS52YDR484W SEC4P07560 215 aaKnown RBP1.01□□□□□ -2.25
VPS52YDR484W IDH1P28834 360 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
VPS52YDR484W PRP18P33411 251 aaPredicted RBP1.01□□□□□ -2.25
VPS52YDR484W PRX1P34227 261 aaKnown RBP1.01□□□□□ -2.25
VPS52YDR484W MSS2P40990 351 aa1.01□□□□□ -2.25
VPS52YDR484W RAD17P48581 401 aa1.01□□□□□ -2.25
VPS52YDR484W CUS2P53830 285 aaPredicted RBP1.01□□□□□ -2.25
VPS52YDR484W YDR249CQ03787 373 aa1.01□□□□□ -2.25
VPS52YDR484W YDL180WQ12301 547 aa1.01□□□□□ -2.25
VPS52YDR484W CBT1P36038 271 aaPredicted RBP1.01□□□□□ -2.25
VPS52YDR484W YNL194CP40169 301 aa1.01□□□□□ -2.25
VPS52YDR484W YGR050CP53231 118 aa1.01□□□□□ -2.25
VPS52YDR484W POP3P53833 195 aaPredicted RBP1.01□□□□□ -2.25
VPS52YDR484W RPL25P04456 142 aaKnown RBP1□□□□□ -2.25
VPS52YDR484W TVP38P36164 337 aa1□□□□□ -2.25
VPS52YDR484W TRM5P38793 499 aa1□□□□□ -2.25
VPS52YDR484W RPB3P16370 318 aaKnown RBP0.99□□□□□ -2.25
VPS52YDR484W MAG1P22134 296 aaKnown RBP0.99□□□□□ -2.25
VPS52YDR484W KNH1P50112 268 aa0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 111.9 ms