RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	LAG1	P38703	411 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	GNA1	P43577	159 aa	Predicted RBP	4.04	□□□□□ -1.76
SUP35	YDR172W	VPS28	Q02767	242 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	YOL024W	Q08172	172 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	LAS17	Q12446	633 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	MSI1	P13712	422 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	DEG1	P31115	442 aa	Known RBP	4.04	□□□□□ -1.76
SUP35	YDR172W	GLC7	P32598	312 aa	Known RBP	4.04	□□□□□ -1.76
SUP35	YDR172W	MNS1	P32906	549 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	RFC2	P40348	353 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	CAF16	P43569	289 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	ACT1	P60010	375 aa	Known RBP	4.04	□□□□□ -1.76
SUP35	YDR172W	LRS4	Q04087	347 aa	Known RBP	4.04	□□□□□ -1.76
SUP35	YDR172W	TGS1	Q12052	315 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	YDL180W	Q12301	547 aa		4.04	□□□□□ -1.76
SUP35	YDR172W	IPP1	P00817	287 aa	Known RBP	4.03	□□□□□ -1.76
SUP35	YDR172W	CKA1	P15790	372 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	OCH1	P31755	480 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	SRB6	P32570	121 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	REC114	P32841	428 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	MRPS5	P33759	307 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	MRPL39	P36533	70 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	MOH1	P38191	138 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	YBR096W	P38256	230 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	ARC40	P38328	384 aa	Known RBP	4.03	□□□□□ -1.76
SUP35	YDR172W	EMC5	P40540	141 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	SLX9	P53251	210 aa	Predicted RBP	4.03	□□□□□ -1.76
SUP35	YDR172W	FMP41	P53889	259 aa	Known RBP	4.03	□□□□□ -1.76
SUP35	YDR172W	TSA2	Q04120	196 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	CAC2	Q04199	468 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	HRI1	Q05905	244 aa	Known RBP	4.03	□□□□□ -1.76
SUP35	YDR172W	YDL086W	Q07505	273 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	YPL278C	Q08990	100 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	FCF2	Q12035	217 aa	Predicted RBP	4.03	□□□□□ -1.76
SUP35	YDR172W	YCT1	Q12235	531 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	MED4	Q12343	284 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	YOR192C-C	Q3E736	78 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	VMA9	Q3E7B6	73 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	Q0142	Q9ZZW4	58 aa		4.03	□□□□□ -1.76
SUP35	YDR172W	GAL1	P04385	528 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	RPL25	P04456	142 aa	Known RBP	4.02	□□□□□ -1.77
SUP35	YDR172W	RPL7A	P05737	244 aa	Known RBP	4.02	□□□□□ -1.77
SUP35	YDR172W	UBI4	P0CG63	381 aa	Known RBP	4.02	□□□□□ -1.77
SUP35	YDR172W	ZRC1	P20107	442 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	PEX4	P29340	183 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	RPB7	P34087	171 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	MCH2	P36032	473 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	SWD3	P38123	315 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	YEA6	P39953	335 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	YEL057C	P39983	233 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	YER079W	P40052	210 aa	Known RBP	4.02	□□□□□ -1.77
SUP35	YDR172W	PKP2	P53170	491 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	YOL118C	Q08259	102 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	YOR186W	Q08560	144 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
SUP35	YDR172W	USB1	Q12208	290 aa	Known RBP	4.02	□□□□□ -1.77
SUP35	YDR172W	FRE8	Q12209	686 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	RPL7B	Q12213	244 aa	Known RBP	4.02	□□□□□ -1.77
SUP35	YDR172W	IZH2	Q12442	317 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	PCC1	Q3E833	88 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	SAG1	P20840	650 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	ATG15	P25641	520 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	ERG2	P32352	222 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	MIA40	P36046	403 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	GPI16	P38875	610 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	POP2	P39008	433 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	FLX1	P40464	311 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	OST1	P41543	476 aa	Known RBP	4.02	□□□□□ -1.77
SUP35	YDR172W	CAF40	P53829	373 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	MRPL19	P53875	158 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	GPI15	P53961	229 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	YPL077C	Q02831	240 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	ERP1	Q05359	219 aa	Known RBP	4.02	□□□□□ -1.77
SUP35	YDR172W	MPD1	Q12404	318 aa	Known RBP	4.02	□□□□□ -1.77
SUP35	YDR172W	YLR365W	Q7LIF2	110 aa		4.02	□□□□□ -1.77
SUP35	YDR172W	PAC2	P39937	518 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	YIL024C	P40543	189 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	YJR012C	P47087	207 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	YGL260W	P53056	76 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	SNO1	Q03144	224 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	PRS5	Q12265	496 aa	Known RBP	4.01	□□□□□ -1.77
SUP35	YDR172W	HUG1	Q6Q5K6	68 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	LDS1	P31379	325 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	MSK1	P32048	576 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	LNP1	P38878	278 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	YER084W	P40057	128 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	GPP1	P41277	250 aa	Known RBP	4.01	□□□□□ -1.77
SUP35	YDR172W	YJR056C	P47115	236 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	YIF1	P53845	314 aa	Known RBP	4.01	□□□□□ -1.77
SUP35	YDR172W	ADD37	Q03233	198 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	RCE1	Q03530	315 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	YDR415C	Q04033	374 aa	Predicted RBP	4.01	□□□□□ -1.77
SUP35	YDR172W	RFU1	Q08003	200 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	YPR108W-A	Q3E7B3	70 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	COA2	Q3E823	68 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	YBR182C-A	Q8TGU6	64 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	ISN1	Q99312	450 aa		4.01	□□□□□ -1.77
SUP35	YDR172W	ECM25	P32525	599 aa		4	□□□□□ -1.77
SUP35	YDR172W	YKL162C	P36052	402 aa		4	□□□□□ -1.77
SUP35	YDR172W	RPA34	P47006	233 aa	Predicted RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms