RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C DBF2P22204 572 aa0.91□□□□□ -2.26
SWI5YDR146C SSO1P32867 290 aa0.91□□□□□ -2.26
SWI5YDR146C GCN20P43535 752 aaKnown RBP0.91□□□□□ -2.26
SWI5YDR146C NUP57P48837 541 aa0.91□□□□□ -2.26
SWI5YDR146C SWP1Q02795 286 aa0.91□□□□□ -2.26
SWI5YDR146C YMD8Q03697 442 aa0.91□□□□□ -2.26
SWI5YDR146C MCP1Q12106 302 aa0.91□□□□□ -2.26
SWI5YDR146C NCB2Q92317 146 aa0.91□□□□□ -2.26
SWI5YDR146C PDR18P53756 1333 aa0.9□□□□□ -2.27
SWI5YDR146C ARG80P07249 177 aa0.9□□□□□ -2.27
SWI5YDR146C YGL010WP25338 174 aa0.9□□□□□ -2.27
SWI5YDR146C PPA2P28239 310 aa0.9□□□□□ -2.27
SWI5YDR146C UTP30P36144 274 aaKnown RBP0.9□□□□□ -2.27
SWI5YDR146C MRPL17P36528 281 aa0.9□□□□□ -2.27
SWI5YDR146C YBR220CP38318 560 aa0.9□□□□□ -2.27
SWI5YDR146C BXI1P48558 297 aa0.9□□□□□ -2.27
SWI5YDR146C TIM11P81449 96 aaPredicted RBP0.9□□□□□ -2.27
SWI5YDR146C BUD25P85052 153 aa0.9□□□□□ -2.27
SWI5YDR146C RNH1Q04740 348 aa0.9□□□□□ -2.27
SWI5YDR146C YBR121C-AP0C5L4 52 aa0.89□□□□□ -2.27
SWI5YDR146C ATG22P25568 528 aa0.89□□□□□ -2.27
SWI5YDR146C FZF1P32805 299 aa0.89□□□□□ -2.27
SWI5YDR146C UPS2P35200 230 aa0.89□□□□□ -2.27
SWI5YDR146C YBR219CP38317 127 aa0.89□□□□□ -2.27
SWI5YDR146C VTC1P40046 129 aaRIP-Chip data0.89□□□□□ -2.27not detected
SWI5YDR146C CWC23P52868 283 aaPredicted RBP0.89□□□□□ -2.27
SWI5YDR146C YGR050CP53231 118 aa0.89□□□□□ -2.27
SWI5YDR146C YNR077CP53758 84 aa0.89□□□□□ -2.27
SWI5YDR146C PET191Q02772 108 aa0.89□□□□□ -2.27
SWI5YDR146C YDR249CQ03787 373 aa0.89□□□□□ -2.27
SWI5YDR146C CSI2Q08054 341 aa0.89□□□□□ -2.27
SWI5YDR146C YNG1Q08465 219 aa0.89□□□□□ -2.27
SWI5YDR146C TDA8Q6B2U8 126 aa0.89□□□□□ -2.27
SWI5YDR146C YDR157WA0A023PZE8 133 aa0.89□□□□□ -2.27
SWI5YDR146C CDC33P07260 213 aaKnown RBP0.89□□□□□ -2.27
SWI5YDR146C TAF14P35189 244 aa0.89□□□□□ -2.27
SWI5YDR146C UMP1P38293 148 aa0.89□□□□□ -2.27
SWI5YDR146C ADO1P47143 340 aaKnown RBP0.89□□□□□ -2.27
SWI5YDR146C GAS3Q03655 524 aa0.89□□□□□ -2.27
SWI5YDR146C FSF1Q12029 327 aaKnown RBP0.89□□□□□ -2.27
SWI5YDR146C TSC3Q3E790 80 aa0.89□□□□□ -2.27
SWI5YDR146C RPL2AP0CX45 254 aaKnown RBP0.88□□□□□ -2.27
SWI5YDR146C RPL2BP0CX46 254 aaKnown RBP0.88□□□□□ -2.27
SWI5YDR146C NHP6BP11633 99 aaKnown RBP0.88□□□□□ -2.27
SWI5YDR146C IDH1P28834 360 aaKnown RBP RIP-Chip data0.88□□□□□ -2.27not detected
SWI5YDR146C PRP18P33411 251 aaPredicted RBP0.88□□□□□ -2.27
SWI5YDR146C YNL217WP40152 326 aa0.88□□□□□ -2.27
SWI5YDR146C YNL194CP40169 301 aa0.88□□□□□ -2.27
SWI5YDR146C MZM1Q03429 123 aaPredicted RBP0.88□□□□□ -2.27
SWI5YDR146C RUD3Q12234 484 aaKnown RBP0.88□□□□□ -2.27
SWI5YDR146C JLP1Q12358 412 aa0.88□□□□□ -2.27
SWI5YDR146C UBR2Q07963 1872 aa0.88□□□□□ -2.27
SWI5YDR146C YOL162WP0CF19 215 aa0.88□□□□□ -2.27
SWI5YDR146C CBT1P36038 271 aaPredicted RBP0.88□□□□□ -2.27
SWI5YDR146C YKR045CP36138 183 aa0.88□□□□□ -2.27
SWI5YDR146C MRPL28P36527 147 aa0.88□□□□□ -2.27
SWI5YDR146C GAA1P39012 614 aa0.88□□□□□ -2.27
SWI5YDR146C IRC18P47056 224 aa0.88□□□□□ -2.27
SWI5YDR146C RAD17P48581 401 aa0.88□□□□□ -2.27
SWI5YDR146C PDR17P53844 350 aa0.88□□□□□ -2.27
SWI5YDR146C SNZ1Q03148 297 aa0.88□□□□□ -2.27
SWI5YDR146C TIM9O74700 87 aa0.87□□□□□ -2.27
SWI5YDR146C RPL28P02406 149 aaKnown RBP0.87□□□□□ -2.27
SWI5YDR146C COQ1P18900 473 aa0.87□□□□□ -2.27
SWI5YDR146C RPL13BP40212 199 aaKnown RBP0.87□□□□□ -2.27
SWI5YDR146C GVP36P40531 326 aaKnown RBP0.87□□□□□ -2.27
SWI5YDR146C POP3P53833 195 aaPredicted RBP0.87□□□□□ -2.27
SWI5YDR146C NUP49Q02199 472 aa0.87□□□□□ -2.27
SWI5YDR146C GGA1Q06336 557 aa0.87□□□□□ -2.27
SWI5YDR146C GPM2Q12008 311 aa0.87□□□□□ -2.27
SWI5YDR146C RPL13AQ12690 199 aaPredicted RBP0.87□□□□□ -2.27
SWI5YDR146C TUS1Q06412 1307 aa0.87□□□□□ -2.27
SWI5YDR146C GCN3P14741 305 aa0.86□□□□□ -2.27
SWI5YDR146C STE18P18852 110 aa0.86□□□□□ -2.27
SWI5YDR146C MRPS28P21771 286 aa0.86□□□□□ -2.27
SWI5YDR146C YET1P35723 206 aa0.86□□□□□ -2.27
SWI5YDR146C SHE2P36068 246 aaKnown RBP RIP-Chip data0.86□□□□□ -2.27not detected
SWI5YDR146C PGA2P53903 129 aa0.86□□□□□ -2.27
SWI5YDR146C LSM7P53905 115 aaKnown RBP0.86□□□□□ -2.27
SWI5YDR146C ANT1Q06497 328 aa0.86□□□□□ -2.27
SWI5YDR146C YPL162CQ12042 273 aa0.86□□□□□ -2.27
SWI5YDR146C YIL177CP40434 1758 aa0.86□□□□□ -2.27
SWI5YDR146C YJL225CP40889 1758 aa0.86□□□□□ -2.27
SWI5YDR146C FLO9P39712 1322 aa0.86□□□□□ -2.27
SWI5YDR146C JIP3O13555 125 aa0.86□□□□□ -2.27
SWI5YDR146C KSS1P14681 368 aa0.86□□□□□ -2.27
SWI5YDR146C RPB3P16370 318 aaKnown RBP0.86□□□□□ -2.27
SWI5YDR146C ATP15P21306 62 aa0.86□□□□□ -2.27
SWI5YDR146C SNC2P33328 115 aa0.86□□□□□ -2.27
SWI5YDR146C TMA19P35691 167 aaKnown RBP0.86□□□□□ -2.27
SWI5YDR146C TCD1P38756 429 aa0.86□□□□□ -2.27
SWI5YDR146C COG5P53951 403 aa0.86□□□□□ -2.27
SWI5YDR146C FPR1P20081 114 aaKnown RBP0.85□□□□□ -2.27
SWI5YDR146C MAG1P22134 296 aaKnown RBP0.85□□□□□ -2.27
SWI5YDR146C RFA3P26755 122 aaKnown RBP0.85□□□□□ -2.27
SWI5YDR146C MGM101P32787 269 aaKnown RBP0.85□□□□□ -2.27
SWI5YDR146C YCR087C-AP37263 153 aa0.85□□□□□ -2.27
SWI5YDR146C YBR285WP38354 144 aa0.85□□□□□ -2.27
SWI5YDR146C VMA22P38784 181 aa0.85□□□□□ -2.27
SWI5YDR146C IKI1P38874 309 aa0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 128.1 ms