RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W THO1P40040 218 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W MIC19P43594 170 aa1.68□□□□□ -2.14
UBP1YDL122W LCB3P47013 409 aa1.68□□□□□ -2.14
UBP1YDL122W HAM1P47119 197 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W NSA1P53136 463 aaPredicted RBP1.68□□□□□ -2.14
UBP1YDL122W CDH1P53197 566 aa1.68□□□□□ -2.14
UBP1YDL122W YMR166CQ03829 368 aa1.68□□□□□ -2.14
UBP1YDL122W PEX12Q04370 399 aa1.68□□□□□ -2.14
UBP1YDL122W SPO77Q06134 477 aa1.68□□□□□ -2.14
UBP1YDL122W PRM3Q08931 133 aa1.68□□□□□ -2.14
UBP1YDL122W SNF8Q12483 233 aa1.68□□□□□ -2.14
UBP1YDL122W STE18P18852 110 aa1.67□□□□□ -2.14
UBP1YDL122W RNA15P25299 296 aaPredicted RBP1.67□□□□□ -2.14
UBP1YDL122W RIB1P38066 345 aa1.67□□□□□ -2.14
UBP1YDL122W MIC12P38341 106 aa1.67□□□□□ -2.14
UBP1YDL122W MAM33P40513 266 aa1.67□□□□□ -2.14
UBP1YDL122W CUS2P53830 285 aaPredicted RBP1.67□□□□□ -2.14
UBP1YDL122W DIG1Q03063 452 aaKnown RBP1.67□□□□□ -2.14
UBP1YDL122W CTR3Q06686 241 aa1.67□□□□□ -2.14
UBP1YDL122W AYT1Q12226 474 aa1.67□□□□□ -2.14
UBP1YDL122W RPN6Q12377 434 aa1.67□□□□□ -2.14
UBP1YDL122W MRX4Q12467 430 aa1.67□□□□□ -2.14
UBP1YDL122W MHT1Q12525 324 aa1.67□□□□□ -2.14
UBP1YDL122W KIN28P06242 306 aa1.67□□□□□ -2.14
UBP1YDL122W CPR1P14832 162 aaKnown RBP1.67□□□□□ -2.14
UBP1YDL122W MCH2P36032 473 aa1.67□□□□□ -2.14
UBP1YDL122W CBT1P36038 271 aaPredicted RBP1.67□□□□□ -2.14
UBP1YDL122W ECM4P36156 370 aa1.67□□□□□ -2.14
UBP1YDL122W CTR2P38865 189 aa1.67□□□□□ -2.14
UBP1YDL122W YRB1P41920 201 aaKnown RBP1.67□□□□□ -2.14
UBP1YDL122W CIN2P46670 268 aa1.67□□□□□ -2.14
UBP1YDL122W YDR274CP87283 123 aa1.67□□□□□ -2.14
UBP1YDL122W TDA1Q03533 586 aa1.67□□□□□ -2.14
UBP1YDL122W FMP42Q04991 504 aa1.67□□□□□ -2.14
UBP1YDL122W ERP1Q05359 219 aaKnown RBP1.67□□□□□ -2.14
UBP1YDL122W SGA1P08019 549 aa1.66□□□□□ -2.14
UBP1YDL122W RPL27AP0C2H6 136 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W RPL27BP0C2H7 136 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W RPL23AP0CX41 137 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W RPL23BP0CX42 137 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W RNA14P25298 677 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W POF1P25576 258 aa1.66□□□□□ -2.14
UBP1YDL122W INO2P26798 304 aa1.66□□□□□ -2.14
UBP1YDL122W PTM1P32857 523 aa1.66□□□□□ -2.14
UBP1YDL122W KTI12P34253 313 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W YPC1P38298 316 aa1.66□□□□□ -2.14
UBP1YDL122W RTC3P38804 111 aaPredicted RBP1.66□□□□□ -2.14
UBP1YDL122W SOP4P39543 234 aaPredicted RBP1.66□□□□□ -2.14
UBP1YDL122W RPR2P40571 144 aa1.66□□□□□ -2.14
UBP1YDL122W HAC1P41546 238 aa1.66□□□□□ -2.14
UBP1YDL122W YFL067WP43537 175 aa1.66□□□□□ -2.14
UBP1YDL122W YDC1Q02896 317 aa1.66□□□□□ -2.14
UBP1YDL122W HOR7Q05827 59 aa1.66□□□□□ -2.14
UBP1YDL122W SFH1Q06168 426 aa1.66□□□□□ -2.14
UBP1YDL122W YDL114WQ07530 308 aa1.66□□□□□ -2.14
UBP1YDL122W BRX1Q08235 291 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W CSM4Q08955 156 aa1.66□□□□□ -2.14
UBP1YDL122W TFC7Q12415 435 aa1.66□□□□□ -2.14
UBP1YDL122W RPL39P04650 51 aa1.66□□□□□ -2.14
UBP1YDL122W YBR121C-AP0C5L4 52 aa1.66□□□□□ -2.14
UBP1YDL122W RPS18AP0CX55 146 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W RPS18BP0CX56 146 aaPredicted RBP1.66□□□□□ -2.14
UBP1YDL122W CBF1P17106 351 aa1.66□□□□□ -2.14
UBP1YDL122W YMR31P19955 123 aa1.66□□□□□ -2.14
UBP1YDL122W CAM1P29547 415 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W FUN26P31381 517 aa1.66□□□□□ -2.14
UBP1YDL122W DEP1P31385 405 aa1.66□□□□□ -2.14
UBP1YDL122W PDC2P32896 925 aa1.66□□□□□ -2.14
UBP1YDL122W SPT4P32914 102 aaPredicted RBP1.66□□□□□ -2.14
UBP1YDL122W SDS24P38314 527 aa1.66□□□□□ -2.14
UBP1YDL122W TRS20P38334 175 aa1.66□□□□□ -2.14
UBP1YDL122W ERG28P40030 148 aa1.66□□□□□ -2.14
UBP1YDL122W COX15P40086 486 aa1.66□□□□□ -2.14
UBP1YDL122W YFR054CP43622 192 aa1.66□□□□□ -2.14
UBP1YDL122W EFM5P53200 248 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W SCS7Q03529 384 aa1.66□□□□□ -2.14
UBP1YDL122W HPT1Q04178 221 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W DTD1Q07648 150 aaKnown RBP1.66□□□□□ -2.14
UBP1YDL122W YGK3Q12222 375 aaPredicted RBP1.66□□□□□ -2.14
UBP1YDL122W HMS1Q12398 434 aa1.66□□□□□ -2.14
UBP1YDL122W TRP1P00912 224 aa1.65□□□□□ -2.15
UBP1YDL122W GPA2P10823 449 aa1.65□□□□□ -2.15
UBP1YDL122W BGL2P15703 313 aaKnown RBP1.65□□□□□ -2.15
UBP1YDL122W MRPL10P36520 322 aa1.65□□□□□ -2.15
UBP1YDL122W ARC40P38328 384 aaKnown RBP1.65□□□□□ -2.15
UBP1YDL122W VHT1P53241 593 aa1.65□□□□□ -2.15
UBP1YDL122W MRX9Q07349 420 aaKnown RBP1.65□□□□□ -2.15
UBP1YDL122W COQ10Q08058 207 aa1.65□□□□□ -2.15
UBP1YDL122W YDL199CQ12407 687 aa1.65□□□□□ -2.15
UBP1YDL122W PRM4Q12498 284 aa1.65□□□□□ -2.15
UBP1YDL122W YKL183C-AQ3E765 70 aa1.65□□□□□ -2.15
UBP1YDL122W YPR096CO13587 100 aa1.65□□□□□ -2.15
UBP1YDL122W CYC3P06182 269 aa1.65□□□□□ -2.15
UBP1YDL122W MIR1P23641 311 aaKnown RBP1.65□□□□□ -2.15
UBP1YDL122W MPC2P38857 129 aa1.65□□□□□ -2.15
UBP1YDL122W PEX22P39718 180 aa1.65□□□□□ -2.15
UBP1YDL122W YNL194CP40169 301 aa1.65□□□□□ -2.15
UBP1YDL122W YPT32P51996 222 aaKnown RBP1.65□□□□□ -2.15
UBP1YDL122W CWC23P52868 283 aaPredicted RBP1.65□□□□□ -2.15
UBP1YDL122W RMR1P53060 241 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms