RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK22	YCR073C	HED1	Q03937	162 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	YPL264C	Q08980	353 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	PRM4	Q12498	284 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	YCR024C-B	Q3E7Z8	88 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	MNS1	P32906	549 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	UPS2	P35200	230 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	VBA2	P38358	474 aa	Known RBP	4.95	□□□□□ -1.62
SSK22	YCR073C	NNF1	P47149	201 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	SLX9	P53251	210 aa	Predicted RBP	4.95	□□□□□ -1.62
SSK22	YCR073C	RNH201	P53942	307 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	TGL2	P54857	326 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	ISA2	Q12425	185 aa		4.95	□□□□□ -1.62
SSK22	YCR073C	PDE1	P22434	369 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	ERJ5	P43613	295 aa	Predicted RBP	4.94	□□□□□ -1.62
SSK22	YCR073C	PUS4	P48567	403 aa	Known RBP	4.94	□□□□□ -1.62
SSK22	YCR073C	ELA1	P53861	379 aa	Predicted RBP	4.94	□□□□□ -1.62
SSK22	YCR073C	VPS28	Q02767	242 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	YLR365W	Q7LIF2	110 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	MES1	P00958	751 aa	Known RBP	4.94	□□□□□ -1.62
SSK22	YCR073C	HTB1	P02293	131 aa	Known RBP	4.94	□□□□□ -1.62
SSK22	YCR073C	HTB2	P02294	131 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	MAK32	P23060	363 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	CPR2	P23285	205 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	SMD3	P43321	101 aa	Known RBP	4.94	□□□□□ -1.62
SSK22	YCR073C	UFD1	P53044	361 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	CPD1	P53314	239 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	YML018C	Q03730	393 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	HAA1	Q12753	694 aa	Known RBP	4.94	□□□□□ -1.62
SSK22	YCR073C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.94	□□□□□ -1.62
SSK22	YCR073C	YIL002W-A	Q3E7Z5	69 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	ADH2	P00331	348 aa	Known RBP	4.94	□□□□□ -1.62
SSK22	YCR073C	DDI2	P0CH63	225 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	DDI3	P0CH64	225 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	ELF1	P36053	145 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	BRP1	P53194	125 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	NAG1	Q8TGN9	163 aa		4.94	□□□□□ -1.62
SSK22	YCR073C	ALK2	P32789	676 aa	Predicted RBP	4.93	□□□□□ -1.62
SSK22	YCR073C	CRH1	P53301	507 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	YPR071W	Q12346	211 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	TAE1	P38340	232 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	MCP1	Q12106	302 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	YPR108W-A	Q3E7B3	70 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	TRM7	P38238	310 aa	Known RBP	4.93	□□□□□ -1.62
SSK22	YCR073C	SSH1	P38353	490 aa	Known RBP	4.93	□□□□□ -1.62
SSK22	YCR073C	CAB5	Q03941	241 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	DAL4	Q04895	635 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	YLR030W	Q07967	263 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	PAU23	Q07987	124 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	PAU17	Q12370	124 aa		4.93	□□□□□ -1.62
SSK22	YCR073C	STE18	P18852	110 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	RPB7	P34087	171 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	YKL187C	P34231	750 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	MGE1	P38523	228 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	UIP3	P39547	235 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	ALG12	P53730	551 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	UPS3	Q04006	179 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	YOL118C	Q08259	102 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	VAM3	Q12241	283 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	YMR084W	A2P2R3	262 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	MBF1	O14467	151 aa	Known RBP	4.92	□□□□□ -1.62
SSK22	YCR073C	STS1	P38637	319 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	NSA1	P53136	463 aa	Predicted RBP	4.92	□□□□□ -1.62
SSK22	YCR073C	PCP1	P53259	346 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	RCE1	Q03530	315 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	HRI1	Q05905	244 aa	Known RBP	4.92	□□□□□ -1.62
SSK22	YCR073C	RFU1	Q08003	200 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	POM33	Q12164	279 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	YIL046W-A	Q3E7Z4	54 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	UBA3	Q99344	299 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PAU1	P0CE88	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PAU14	P0CE89	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PAU6	P0CE90	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PAU18	P0CE91	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PAU8	P0CE92	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PAU11	P0CE93	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	FIG1	P38224	298 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PAU13	P38725	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	CFD1	P40558	293 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	RPA34	P47006	233 aa	Predicted RBP	4.92	□□□□□ -1.62
SSK22	YCR073C	PAU10	Q03050	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PAU20	Q08322	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	GRE1	Q08969	168 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PAU9	Q3E770	120 aa		4.92	□□□□□ -1.62
SSK22	YCR073C	PIC2	P40035	300 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	FRM2	P37261	193 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	YBR292C	P38357	123 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	HSP10	P38910	106 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	ENB1	Q08299	606 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	HUT1	Q12520	339 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	YKR104W	P0CE69	306 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	ERG3	P32353	365 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	YFL054C	P43549	646 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	YNR040W	P53736	256 aa		4.91	□□□□□ -1.62
SSK22	YCR073C	TMA7	Q3E764	64 aa	Known RBP	4.91	□□□□□ -1.62
SSK22	YCR073C	DAT1	P13483	248 aa	Known RBP	4.9	□□□□□ -1.62
SSK22	YCR073C	EMP70	P32802	667 aa		4.9	□□□□□ -1.62
SSK22	YCR073C	SOH1	P38633	127 aa		4.9	□□□□□ -1.62
SSK22	YCR073C	PFS1	P38872	237 aa		4.9	□□□□□ -1.62
SSK22	YCR073C	PEX21	P50091	288 aa		4.9	□□□□□ -1.62
SSK22	YCR073C	RHO5	P53879	331 aa	Known RBP	4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms